Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 8.8e-156 553.5 267 100.0
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 1.1e-105 387.1 268 70.5
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 2.1e-101 372.9 268 67.2
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 2.4e-89 332.8 213 75.1
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 7.1e-89 331.3 273 61.9
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.7e-87 326.6 255 67.8
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 7.1e-81 304.7 264 59.8
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 1.6e-80 303.5 256 60.9
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 7.8e-80 301.2 246 63.8
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 1.7e-79 300.1 214 69.2
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 5.1e-79 298.5 213 68.5
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 1.6e-77 293.5 252 58.7
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 2.0e-75 286.6 199 67.3
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 7.6e-75 284.6 213 65.7
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 3.8e-74 282.3 257 58.0
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 3.8e-74 282.3 257 59.9
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 1.1e-73 280.8 213 64.3
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 1.4e-73 280.4 211 66.8
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 1.9e-73 280.0 270 53.7
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 1.2e-72 277.3 252 54.8
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 1.6e-72 276.9 250 58.8
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 2.7e-72 276.2 209 65.1
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 6.0e-72 275.0 218 61.0
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 3.9e-71 272.3 212 62.3
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 5.1e-71 271.9 289 51.9
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 5.1e-71 271.9 213 61.0
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 1.1e-70 270.8 253 56.5
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.9e-70 270.0 267 55.4
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 7.3e-70 268.1 239 58.2
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 9.6e-70 267.7 213 60.1
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 1.3e-69 267.3 205 62.0
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.3e-69 267.3 176 72.7
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.6e-69 266.9 249 57.0
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.6e-69 266.9 218 61.9
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 2.1e-69 266.5 213 60.6
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.8e-69 266.2 208 64.4
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 1.1e-68 264.2 213 60.6
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 1.1e-68 264.2 244 55.7
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 1.4e-68 263.8 237 54.4
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 9.0e-68 261.2 215 59.5
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 4.5e-67 258.8 274 51.1
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 7.6e-67 258.1 249 54.2
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 9.9e-67 257.7 253 51.0
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 1.4e-65 253.8 215 58.1
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 1.9e-65 253.4 237 53.2
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 2.4e-65 253.1 256 51.6
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 3.2e-65 252.7 210 55.2
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 3.2e-65 252.7 206 55.8
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 9.3e-65 251.1 279 49.8
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 1.6e-64 250.4 254 52.0
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 4.6e-64 248.8 255 52.5
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 4.6e-64 248.8 245 51.8
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 4.6e-64 248.8 218 54.1
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 1.3e-63 247.3 244 53.3
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 1.1e-62 244.2 200 60.0
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 4.3e-62 242.3 214 56.5
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 4.3e-62 242.3 225 55.1
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 1.3e-61 240.7 258 50.8
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 2.1e-61 240.0 191 61.3
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 2.1e-61 240.0 257 50.2
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 2.1e-61 240.0 257 50.2
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 2.1e-61 240.0 257 50.2
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 4.8e-61 238.8 274 48.5
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 1.4e-60 237.3 264 50.0
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 1.8e-60 236.9 226 52.2
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 1.8e-60 236.9 196 58.2
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 6.9e-60 235.0 222 52.3
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 1.2e-59 234.2 204 51.5
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 4.5e-59 232.3 196 57.7
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 7.6e-59 231.5 224 54.0
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 1.7e-58 230.3 209 53.6
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 4.9e-58 228.8 191 59.7
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 1.1e-57 227.6 189 60.3
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 1.4e-57 227.3 187 63.1
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 6.0e-56 221.9 224 50.0
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 2.3e-55 219.9 242 48.3
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 5.1e-55 218.8 134 71.6
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 4.3e-54 215.7 226 49.6
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 4.3e-54 215.7 134 70.1
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 1.6e-53 213.8 224 48.7
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 1.8e-52 210.3 224 48.2
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 1.8e-52 210.3 224 49.1
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 2.4e-52 209.9 199 50.8
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 4.1e-52 209.1 224 48.7
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 4.1e-52 209.1 224 48.7
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 2.0e-51 206.8 149 63.8
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 2.6e-51 206.5 199 52.8
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 1.3e-50 204.1 171 64.3
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 1.7e-50 203.8 147 63.3
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 5.0e-50 202.2 228 48.2
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.1e-49 201.1 225 47.1
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 1.4e-49 200.7 136 64.7
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 2.5e-49 199.9 196 53.6
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.3e-45 187.6 226 44.2
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.3e-45 187.6 226 44.2
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 3.7e-45 186.0 204 45.6
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 2.4e-44 183.3 122 67.2
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 1.2e-40 171.0 128 59.4
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 2.5e-38 163.3 201 41.8
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 2.2e-37 160.2 213 40.4
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 2.4e-36 156.8 153 50.3
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 6.9e-36 155.2 113 56.6
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 8.5e-34 148.3 194 37.1
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 6.7e-31 138.7 138 42.0
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 3.1e-28 129.8 142 47.2
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 5.5e-25 119.0 127 41.7
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 7.2e-25 118.6 137 48.9
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 3.6e-24 116.3 128 37.5
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 2.0e-22 110.5 98 57.1
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 2.8e-21 106.7 117 47.0
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 3.7e-21 106.3 227 29.5
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 2.4e-20 103.6 159 35.8
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 2.3e-15 87.0 85 49.4
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 3.4e-14 83.2 90 48.9
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 4.5e-11 72.8 49 71.4
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 2.5e-09 67.0 58 51.7
Sabra15G0117400 Salix brachista HOM05D005804 ORTHO05D006849 1.8e-07 60.8 105 37.1


User provided reference genes

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