Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 5.8e-172 607.4 302 100.0
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 1.9e-42 177.2 115 73.9
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 5.3e-40 169.1 120 67.5
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 9.0e-40 168.3 101 77.2
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 9.9e-39 164.9 124 65.3
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 4.6e-36 156.0 109 66.1
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 6.6e-35 152.1 145 53.1
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 1.3e-33 147.9 97 66.0
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 1.2e-31 141.4 165 46.1
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 2.0e-31 140.6 102 62.7
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 2.6e-31 140.2 121 57.0
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 1.3e-30 137.9 98 63.3
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 1.3e-30 137.9 125 51.2
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 1.7e-30 137.5 144 50.7
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 1.1e-29 134.8 100 62.0
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 1.1e-29 134.8 110 61.8
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 3.2e-29 133.3 98 63.3
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 3.2e-29 133.3 99 60.6
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 4.2e-29 132.9 165 46.1
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 4.2e-29 132.9 99 60.6
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 7.1e-29 132.1 98 60.2
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 7.1e-29 132.1 124 49.2
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 9.3e-29 131.7 101 58.4
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 9.3e-29 131.7 99 67.7
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 9.3e-29 131.7 99 59.6
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 1.2e-28 131.3 96 60.4
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 2.1e-28 130.6 96 61.5
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 2.1e-28 130.6 100 58.0
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 3.5e-28 129.8 129 51.2
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 6.0e-28 129.0 137 50.4
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 1.0e-27 128.3 108 58.3
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.8e-27 127.5 93 64.5
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 2.3e-27 127.1 141 47.5
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 3.7e-25 119.8 96 61.5
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 1.1e-21 108.2 82 59.8
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 1.1e-21 108.2 118 44.9
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 1.1e-21 108.2 143 44.1
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 2.7e-20 103.6 106 50.9
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 3.5e-20 103.2 108 51.9
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 7.9e-20 102.1 144 43.1
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 1.0e-19 101.7 96 56.2
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 3.9e-19 99.8 97 50.5
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 3.9e-19 99.8 97 50.5
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 1.5e-18 97.8 96 54.2
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 1.9e-18 97.4 143 42.0
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 2.5e-18 97.1 118 44.9
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 3.3e-18 96.7 120 45.8
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 7.4e-18 95.5 97 48.5
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 9.6e-18 95.1 118 46.6
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 1.6e-17 94.4 99 49.5
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 2.1e-17 94.0 96 50.0
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 2.8e-17 93.6 99 50.5
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 2.8e-17 93.6 99 50.5
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 2.8e-17 93.6 95 48.4
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 3.7e-17 93.2 177 37.3
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 3.7e-17 93.2 104 47.1
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 4.8e-17 92.8 95 48.4
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 4.8e-17 92.8 95 49.5
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 8.2e-17 92.0 104 47.1
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 1.4e-16 91.3 88 51.1
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 1.8e-16 90.9 110 42.7
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 3.1e-16 90.1 124 43.5
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 3.1e-16 90.1 166 38.6
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 6.9e-16 89.0 108 46.3
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 6.9e-16 89.0 96 49.0
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 2.0e-15 87.4 95 50.5
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 2.0e-15 87.4 98 45.9
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 3.4e-15 86.7 96 47.9
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 1.0e-14 85.1 102 44.1
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 1.0e-14 85.1 96 49.0
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 1.3e-14 84.7 99 48.5
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 1.3e-14 84.7 168 32.7
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.7e-14 84.3 102 44.1
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 2.9e-14 83.6 186 35.5
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 3.8e-14 83.2 117 41.0
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 3.8e-14 83.2 94 45.7
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 3.8e-14 83.2 179 34.1
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 3.8e-14 83.2 102 42.2
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 5.0e-14 82.8 165 32.7
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 5.0e-14 82.8 67 50.7
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 6.5e-14 82.4 95 44.2
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 1.9e-13 80.9 107 45.8
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 4.2e-13 79.7 71 50.7
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 5.5e-13 79.3 184 31.5
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 7.2e-13 79.0 107 40.2
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 9.3e-13 78.6 165 31.5
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 1.2e-12 78.2 70 52.9
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 3.5e-12 76.6 63 55.6
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 7.9e-12 75.5 152 34.9
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.3e-11 74.7 111 39.6
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 1.8e-11 74.3 96 41.7
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 5.1e-11 72.8 85 42.4
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 5.1e-11 72.8 66 48.5
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 1.4e-08 64.7 68 52.9
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 1.5e-07 61.2 79 48.1
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 2.2e-06 57.4 65 40.0


User provided reference genes

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