Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001139 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D112888 6.4e-76 287.3 147 100.0
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 2.0e-53 212.6 178 68.0
CSS0015096 Camellia sinensis var. sinensis HOM05D000696 ORTHO05D003201 2.5e-11 72.8 42 76.2
CSS0002668 Camellia sinensis var. sinensis HOM05D000696 ORTHO05D003201 5.6e-11 71.6 42 73.8
CSS0027546 Camellia sinensis var. sinensis HOM05D000696 ORTHO05D003201 4.4e-08 62.0 35 74.3
Dinv42789 Davidia involucrata HOM05D000696 ORTHO05D003201 4.4e-08 62.0 75 44.0
Dinv43312 Davidia involucrata HOM05D000696 ORTHO05D003201 4.4e-08 62.0 75 44.0
Actinidia33312 Actinidia chinensis HOM05D000696 ORTHO05D003201 6.4e-07 58.2 35 68.6
CSS0002516 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D014145 6.4e-07 58.2 71 50.7
Hma1.2p1_0156F.1_g068700 Hydrangea macrophylla HOM05D000696 ORTHO05D003201 1.4e-06 57.0 36 66.7
Hma1.2p1_1495F.1_g287000 Hydrangea macrophylla HOM05D000696 ORTHO05D003201 1.4e-06 57.0 36 66.7
CSS0024470 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 1.9e-06 56.6 36 77.8
CAN.G551.5 Capsicum annuum HOM05D000696 ORTHO05D003201 2.4e-06 56.2 75 41.3
Actinidia20952 Actinidia chinensis HOM05D000696 ORTHO05D003201 4.1e-06 55.5 75 41.3
CSS0007838 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 4.1e-06 55.5 37 75.7
CSS0024000 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 7.0e-06 54.7 35 80.0
Hma1.2p1_1531F.1_g289260 Hydrangea macrophylla HOM05D000696 ORTHO05D003201 7.0e-06 54.7 34 64.7
PGSC0003DMG400007879 Solanum tuberosum HOM05D000696 ORTHO05D003201 7.0e-06 54.7 75 40.0
vmacro13059 Vaccinium macrocarpon HOM05D000696 ORTHO05D003201 7.0e-06 54.7 75 40.0
Aqoxy7G02489 Aquilegia oxysepala HOM05D000696 ORTHO05D003201 9.2e-06 54.3 37 62.2
CSS0008873 Camellia sinensis var. sinensis HOM05D000696 ORTHO05D003201 9.2e-06 54.3 27 81.5
Haze_22174 Corylus avellana HOM05D000696 ORTHO05D003201 9.2e-06 54.3 44 61.4
Eucgr.C00214 Eucalyptus grandis HOM05D000696 ORTHO05D003201 9.2e-06 54.3 36 63.9


User provided reference genes

Program Settings