Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001116 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 6.7e-57 223.8 112 100.0
CSS0008026 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 1.7e-31 139.4 101 77.2
CSS0043173 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 1.7e-31 139.4 101 77.2
Actinidia14385 Actinidia chinensis HOM05D001613 ORTHO05D001556 4.8e-31 137.9 115 68.7
Atru.chr2.2379 Acer truncatum HOM05D000599 ORTHO05D006883 4.1e-30 134.8 101 73.3
Rhsim06G0203600 Rhododendron simsii HOM05D000599 ORTHO05D006883 5.3e-30 134.4 103 70.9
vmacro11900 Vaccinium macrocarpon HOM05D000599 ORTHO05D006883 5.3e-30 134.4 103 70.9
Dinv20217 Davidia involucrata HOM05D000599 ORTHO05D006883 6.9e-30 134.0 101 72.3
CSS0006125 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 9.1e-30 133.7 110 68.2
Gohir.D01G046600 Gossypium hirsutum HOM05D000599 ORTHO05D006883 2.0e-29 132.5 101 70.3
Cpa.g.sc80.13 Carica papaya HOM05D000599 ORTHO05D006883 3.4e-29 131.7 101 69.3
arahy.Tifrunner.gnm1.ann1.10FGX8 Arachis hypogaea HOM05D000599 ORTHO05D006883 4.5e-29 131.3 101 70.3
arahy.Tifrunner.gnm1.ann1.PD8C8E Arachis hypogaea HOM05D000599 ORTHO05D006883 4.5e-29 131.3 101 70.3
Eucgr.F01180 Eucalyptus grandis HOM05D000599 ORTHO05D006883 5.9e-29 131.0 101 70.3
CANSAT35G1865 Cannabis sativa HOM05D000599 ORTHO05D006883 1.0e-28 130.2 101 70.3
Gorai.002G066100 Gossypium raimondii HOM05D000599 ORTHO05D006883 2.2e-28 129.0 101 68.3
Thecc.07G100100 Theobroma cacao HOM05D000599 ORTHO05D006883 2.2e-28 129.0 101 69.3
GSVIVG01014259001 Vitis vinifera HOM05D000599 ORTHO05D006883 2.2e-28 129.0 101 71.3
Nn1g04277 Nelumbo nucifera HOM05D000599 ORTHO05D006883 3.8e-28 128.3 101 69.3
PGR083G0548 Punica granatum HOM05D000599 ORTHO05D006883 3.8e-28 128.3 101 69.3
MBI06_g45594_MAGBIO Magnolia biondii HOM05D000599 ORTHO05D006883 5.0e-28 127.9 101 69.3
TAR627G0901 Trochodendron aralioides HOM05D000599 ORTHO05D006883 5.0e-28 127.9 101 69.3
Lj1A836G33 Lonicera japonica HOM05D000599 ORTHO05D006883 8.5e-28 127.1 101 69.3
Solyc12g014050.2 Solanum lycopersicum HOM05D000599 ORTHO05D006883 8.5e-28 127.1 101 69.3
Sopen12g005790 Solanum pennellii HOM05D000599 ORTHO05D006883 8.5e-28 127.1 101 69.3
Cfa020625 Carpinus fangiana HOM05D000599 ORTHO05D006883 1.1e-27 126.7 101 68.3
CsaV3_3G019590 Cucumis sativus L. HOM05D000599 ORTHO05D006883 1.1e-27 126.7 101 67.3
Manes.12G158400 Manihot esculenta HOM05D000599 ORTHO05D006883 1.1e-27 126.7 101 67.3
QL08p023388 Quercus lobata HOM05D000599 ORTHO05D006883 1.1e-27 126.7 101 68.3
TWI38G1662 Tripterygium wilfordii HOM05D000599 ORTHO05D006883 1.1e-27 126.7 101 68.3
ClCG05G009200 Citrullus lanatus HOM05D000599 ORTHO05D006883 1.4e-27 126.3 101 66.3
Nitab4.5_0003033g0020 Nicotiana tabacum HOM05D000599 ORTHO05D006883 1.4e-27 126.3 101 68.3
PSO210G4318 Papaver somniferum HOM05D000599 ORTHO05D006883 1.4e-27 126.3 101 68.3
Cc05_g11570 Coffea canephora HOM05D000599 ORTHO05D006883 1.9e-27 125.9 101 69.3
Lalb_Chr25g0286171 Lupinus albus HOM05D000599 ORTHO05D006883 1.9e-27 125.9 101 66.3
Potri.001G373200 Populus trichocarpa HOM05D000599 ORTHO05D006883 1.9e-27 125.9 101 67.3
CAN.G329.7 Capsicum annuum HOM05D000599 ORTHO05D006883 2.5e-27 125.6 101 69.3
PGSC0003DMG400015372 Solanum tuberosum HOM05D000599 ORTHO05D006883 2.5e-27 125.6 101 68.3
MELO3C019391.2 Cucumis melo HOM05D000599 ORTHO05D006883 3.2e-27 125.2 101 66.3
Ciclev10008721m.g Citrus clementina HOM05D000599 ORTHO05D006883 4.2e-27 124.8 101 65.3
Duzib213G1012 Durio zibethinus HOM05D000599 ORTHO05D006883 4.2e-27 124.8 101 67.3
PSO832G3682 Papaver somniferum HOM05D000599 ORTHO05D006883 4.2e-27 124.8 101 67.3
RcHm_v2.0_Chr5g0031931 Rosa chinensis HOM05D000599 ORTHO05D006883 4.2e-27 124.8 101 67.3
RcHm_v2.0_Chr5g0032041 Rosa chinensis HOM05D000599 ORTHO05D006883 4.2e-27 124.8 101 67.3
Duzib170G0842 Durio zibethinus HOM05D000599 ORTHO05D006883 5.5e-27 124.4 101 67.3
Peaxi162Scf00000g00284 Petunia axillaris HOM05D000599 ORTHO05D006883 5.5e-27 124.4 101 67.3
HPP92_021507 Vanilla planifolia HOM05D000599 ORTHO05D006883 5.5e-27 124.4 101 67.3
Sed0014270 Sechium edule HOM05D000599 ORTHO05D006883 7.2e-27 124.0 101 65.3
Sc16g0007340 Simmondsia chinensis HOM05D000599 ORTHO05D006883 7.2e-27 124.0 101 68.3
Haze_09378 Corylus avellana HOM05D000599 ORTHO05D006883 9.4e-27 123.6 101 67.3
Lj3g0008187 Lotus japonicus HOM05D000599 ORTHO05D006883 9.4e-27 123.6 101 64.4
Aqoxy4G00576 Aquilegia oxysepala HOM05D000599 ORTHO05D006883 1.2e-26 123.2 101 67.3
FvH4_3g19130 Fragaria vesca HOM05D000599 ORTHO05D006883 1.2e-26 123.2 101 66.3
FAN11G3855 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.2e-26 123.2 101 66.3
FAN16G1937 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.2e-26 123.2 101 66.3
FAN21G2449 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.2e-26 123.2 101 66.3
HPP92_021512 Vanilla planifolia HOM05D000599 ORTHO05D006883 1.6e-26 122.9 101 66.3
HanXRQChr10g0302461 Helianthus annuus HOM05D000599 ORTHO05D006883 2.1e-26 122.5 101 65.3
Sabra16G0245600 Salix brachista HOM05D000599 ORTHO05D006883 2.7e-26 122.1 101 65.3
CiPaw.11G166300 Carya illinoinensis HOM05D000599 ORTHO05D006883 3.6e-26 121.7 101 65.3
Gohir.A01G060100 Gossypium hirsutum HOM05D000599 ORTHO05D006883 6.1e-26 120.9 86 74.4
THA.LOC104810454 Tarenaya hassleriana HOM05D000599 ORTHO05D006883 8.0e-26 120.6 101 63.4
ECA234G4269 Erigeron canadensis HOM05D001613 ORTHO05D006883 1.0e-25 120.2 101 64.4
Medtr2g078520 Medicago truncatula HOM05D000599 ORTHO05D006883 1.0e-25 120.2 101 64.4
Psat5g241360 Pisum sativum HOM05D000599 ORTHO05D006883 1.0e-25 120.2 101 63.4
ATR0602G106 Amborella trichopoda HOM05D000599 ORTHO05D006883 1.4e-25 119.8 101 66.3
CiPaw.12G116700 Carya illinoinensis HOM05D000599 ORTHO05D006883 1.4e-25 119.8 101 64.4
SalBow7G1016 Salvia bowleyana HOM05D000599 ORTHO05D006883 1.4e-25 119.8 101 64.4
DCAR_021003 Daucus carota HOM05D000599 ORTHO05D006883 1.8e-25 119.4 101 64.4
Prupe.4G173000 Prunus persica HOM05D000599 ORTHO05D006883 1.8e-25 119.4 101 63.4
VMungo1080G1405 Vigna mungo HOM05D000599 ORTHO05D006883 1.8e-25 119.4 101 65.3
AT3G15090 Arabidopsis thaliana HOM05D000599 ORTHO05D006883 2.3e-25 119.0 101 64.4
Glyma.12G227400 Glycine max HOM05D000599 ORTHO05D006883 2.3e-25 119.0 101 62.4
Os01g0753100 Oryza sativa ssp. japonica HOM05D000599 ORTHO05D006883 2.3e-25 119.0 101 63.4
Hund22810 Selenicereus undatus HOM05D000599 ORTHO05D006883 3.9e-25 118.2 101 60.4
Lsat_1_v5_gn_5_128780 Lactuca sativa HOM05D000599 ORTHO05D006883 5.2e-25 117.9 99 65.7
unitig_52.g17400 Utricularia gibba HOM05D000599 ORTHO05D006883 5.2e-25 117.9 101 63.4
CARHR090050 Cardamine hirsuta HOM05D000599 ORTHO05D006883 6.7e-25 117.5 101 63.4
Migut.M00767 Erythranthe guttata HOM05D000599 ORTHO05D006883 6.7e-25 117.5 101 64.4
Phvul.005G069200 Phaseolus vulgaris HOM05D000599 ORTHO05D006883 6.7e-25 117.5 101 64.4
FAN25G3373 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.1e-24 116.7 101 64.4
Aa31LG8G2300 Aethionema arabicum HOM05D000599 ORTHO05D006883 2.6e-24 115.5 101 61.4
Ah.04g164460 Amaranthus hybridus HOM05D000599 ORTHO05D006883 2.6e-24 115.5 101 61.4
Carub.0003s1473 Capsella rubella HOM05D000599 ORTHO05D006883 2.6e-24 115.5 101 62.4
BraA03t13064Z Brassica rapa HOM05D000599 ORTHO05D006883 5.7e-24 114.4 101 59.4
DCAR_019576 Daucus carota HOM05D000599 ORTHO05D006883 5.7e-24 114.4 101 60.4
AUR62019503 Chenopodium quinoa HOM05D000599 ORTHO05D006883 9.7e-24 113.6 101 60.4
Glyma.13G272900 Glycine max HOM05D000599 ORTHO05D006883 9.7e-24 113.6 101 60.4
Nitab4.5_0000332g0200 Nicotiana tabacum HOM05D000599 ORTHO05D006883 9.7e-24 113.6 109 61.5
AL3G27440 Arabidopsis lyrata HOM05D000599 ORTHO05D006883 1.3e-23 113.2 101 62.4
EL10Ac4g08277 Beta vulgaris HOM05D000599 ORTHO05D006883 1.3e-23 113.2 101 60.4
AUR62036135 Chenopodium quinoa HOM05D000599 ORTHO05D006883 1.3e-23 113.2 101 60.4
A03p39150 Brassica napus HOM05D000599 ORTHO05D006883 2.2e-23 112.5 99 60.6
Sp3g13290 Schrenkiella parvula HOM05D000599 ORTHO05D006883 2.8e-23 112.1 101 61.4
BcaC01g03898 Brassica carinata HOM05D000599 ORTHO05D006883 3.7e-23 111.7 101 58.4
Ca_04028_v3 Cicer arietinum L. HOM05D000599 ORTHO05D006883 3.7e-23 111.7 101 59.4
Thhalv10020985m.g Eutrema salsugineum HOM05D000599 ORTHO05D006883 3.7e-23 111.7 101 59.4
MD11G1257100 Malus domestica HOM05D000599 ORTHO05D006883 3.7e-23 111.7 101 61.4
Mapoly0049s0129 Marchantia polymorpha HOM05D000599 ORTHO05D006883 3.7e-23 111.7 101 55.4
MD03G1236200 Malus domestica HOM05D000599 ORTHO05D006883 4.8e-23 111.3 101 60.4
C03p47500 Brassica napus HOM05D000599 ORTHO05D006883 6.3e-23 110.9 99 58.6
BolC3t17014H Brassica oleracea HOM05D000599 ORTHO05D006883 6.3e-23 110.9 99 58.6
BcaC01g03893 Brassica carinata HOM05D000599 ORTHO05D006883 8.2e-23 110.5 101 57.4
BcaB06g29534 Brassica carinata HOM05D000599 ORTHO05D006883 1.4e-22 109.8 101 58.4
C05p52130 Brassica napus HOM05D000599 ORTHO05D006883 1.4e-22 109.8 101 58.4
BolC5t33898H Brassica oleracea HOM05D000599 ORTHO05D006883 1.4e-22 109.8 101 58.4
BraA05t22256Z Brassica rapa HOM05D000599 ORTHO05D006883 1.8e-22 109.4 101 57.4
Pp3c14_1550 Physcomitrium patens HOM05D000599 ORTHO05D006883 1.8e-22 109.4 101 56.4
Zm00001eb152950 Zea mays HOM05D000599 ORTHO05D006883 2.4e-22 109.0 101 60.4
A05p34360 Brassica napus HOM05D000599 ORTHO05D006883 4.1e-22 108.2 101 57.4
SMO116G0426 Selaginella moellendorffii HOM05D000599 ORTHO05D006883 2.6e-21 105.5 101 55.4
Oeu025350.3 Olea europaea HOM05D000599 ORTHO05D006883 3.5e-21 105.1 152 46.1
SGA_v2.0_scaffold73G24221 Striga asiatica HOM05D000599 ORTHO05D006883 1.7e-20 102.8 139 48.2
THA.LOC104798757 Tarenaya hassleriana HOM05D000599 ORTHO05D006883 2.5e-19 99.0 114 49.1
Actinidia12546 Actinidia chinensis HOM05D000599 ORTHO05D006883 5.9e-13 77.8 86 54.7
DCAR_019580 Daucus carota HOM05D000599 ORTHO05D006883 5.5e-11 71.2 76 50.0
TPR.G29650 Trifolium pratense HOM05D000599 ORTHO05D006883 9.4e-11 70.5 76 50.0
AagrBONN_evm.TU.Sc2ySwM_368.514 Anthoceros agrestis HOM05D000599 ORTHO05D006883 1.8e-09 66.2 66 54.5
Dinv14951 Davidia involucrata HOM05D001613 ORTHO05D001556 3.0e-09 65.5 95 44.2


User provided reference genes

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