Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 9.5e-53 209.9 107 100.0
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 9.5e-53 209.9 107 100.0
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 1.2e-36 156.4 97 75.3
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 2.1e-36 155.6 97 80.4
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 6.2e-36 154.1 97 76.3
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 6.2e-36 154.1 97 76.3
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 6.2e-36 154.1 97 76.3
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 8.1e-36 153.7 97 75.3
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.8e-35 152.5 97 76.3
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 3.1e-35 151.8 97 75.3
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 5.2e-35 151.0 97 75.3
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 5.2e-35 151.0 97 75.3
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 9.0e-35 150.2 97 75.3
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 9.0e-35 150.2 101 74.3
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 2.0e-34 149.1 104 68.3
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 2.6e-34 148.7 97 75.3
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 3.4e-34 148.3 98 73.5
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 3.4e-34 148.3 97 72.2
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 3.4e-34 148.3 97 75.3
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 4.4e-34 147.9 97 74.2
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 9.9e-34 146.7 97 74.2
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 9.9e-34 146.7 97 71.1
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.3e-33 146.4 97 72.2
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.3e-33 146.4 97 72.2
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.3e-33 146.4 97 72.2
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 1.7e-33 146.0 97 74.2
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 2.2e-33 145.6 97 75.3
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.2e-33 145.6 96 72.9
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 2.9e-33 145.2 97 70.1
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 6.4e-33 144.1 97 71.1
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 8.4e-33 143.7 97 69.1
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 4.2e-32 141.4 97 72.2
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 4.2e-32 141.4 97 69.1
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 5.4e-32 141.0 97 72.2
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 1.6e-31 139.4 97 70.1
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 2.7e-31 138.7 97 69.1
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 3.5e-31 138.3 91 71.4
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.3e-30 136.3 88 73.9
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 8.7e-30 133.7 87 72.4
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.5e-29 132.9 97 63.9
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.5e-29 132.9 87 72.4
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 1.9e-29 132.5 90 68.9
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 5.6e-29 131.0 87 70.1
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 5.6e-29 131.0 88 69.3
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 1.6e-28 129.4 87 72.4
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 2.8e-28 128.6 91 65.9
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 6.2e-28 127.5 89 61.8
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 8.1e-28 127.1 93 66.7
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 5.3e-27 124.4 87 62.1
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 9.0e-27 123.6 87 69.0
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.2e-26 123.2 96 62.5
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.7e-25 119.4 87 64.4
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.2e-24 115.2 97 56.7
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.1e-22 107.8 81 58.0
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 8.7e-22 107.1 109 51.4
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.5e-21 105.5 105 51.4
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 2.5e-21 105.5 97 51.5
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 5.6e-21 104.4 69 69.6
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 3.7e-20 101.7 72 66.7
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 4.8e-20 101.3 71 66.2
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 1.8e-19 99.4 98 49.0
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 2.4e-19 99.0 66 75.8
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.6e-18 95.5 97 51.5
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 7.6e-18 94.0 95 56.8
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 9.9e-18 93.6 98 51.0
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 8.4e-17 90.5 98 49.0
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.9e-16 89.4 98 48.0
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.9e-16 89.4 98 50.0
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 5.5e-16 87.8 97 47.4
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.6e-15 86.3 98 50.0
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 3.3e-13 78.6 58 65.5
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 7.6e-10 67.4 56 62.5
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.2e-07 60.1 97 30.9
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.2e-07 60.1 93 31.2
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.2e-07 60.1 93 31.2
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.7e-07 58.9 44 61.4
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 1.3e-06 56.6 51 56.9
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.3e-06 56.6 93 26.9


User provided reference genes

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