Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 6.7e-195 683.7 321 100.0
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.1e-184 648.3 321 95.3
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 4.2e-181 637.9 321 94.4
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 1.7e-129 466.5 323 67.8
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 8.2e-116 421.0 321 64.8
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.4e-115 420.2 311 71.4
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 2.4e-115 419.5 325 63.7
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 5.3e-115 418.3 321 62.6
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 7.6e-114 414.5 320 61.2
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 2.2e-113 412.9 331 61.0
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 3.5e-111 405.6 322 58.7
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 6.7e-110 401.4 322 59.0
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 3.3e-109 399.1 319 58.9
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 2.2e-108 396.4 324 56.5
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 4.8e-108 395.2 325 56.3
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 1.1e-107 394.0 320 58.8
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 2.4e-107 392.9 323 56.3
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 1.0e-105 387.5 325 57.2
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 1.0e-105 387.5 303 60.1
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 8.5e-105 384.4 319 58.9
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 2.1e-103 379.8 322 56.5
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 3.6e-103 379.0 322 57.5
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 3.6e-103 379.0 322 56.2
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 2.0e-101 373.2 320 55.6
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 2.5e-101 372.9 323 56.0
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 3.3e-101 372.5 326 57.7
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 3.3e-101 372.5 325 56.6
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 1.3e-100 370.5 319 55.8
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 2.8e-100 369.4 334 54.5
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 4.8e-100 368.6 322 57.1
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 3.1e-99 365.9 323 55.1
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 4.1e-99 365.5 320 54.7
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 6.9e-99 364.8 323 55.1
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 9.1e-99 364.4 334 52.7
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 1.2e-98 364.0 322 57.1
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 2.6e-98 362.8 326 56.7
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 7.7e-98 361.3 322 54.3
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 7.7e-98 361.3 334 52.4
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 5.0e-97 358.6 323 56.3
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 6.5e-97 358.2 336 53.3
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 2.1e-95 353.2 331 54.1
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 4.7e-95 352.1 324 54.0
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 1.8e-94 350.1 324 53.4
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 1.8e-94 350.1 310 55.5
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 1.5e-93 347.1 322 54.0
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 5.7e-93 345.1 285 56.5
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 7.4e-93 344.7 322 54.0
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 7.4e-93 344.7 322 54.0
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 2.4e-91 339.7 330 51.8
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 1.5e-90 337.0 324 53.1
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 4.5e-90 335.5 326 49.7
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 2.7e-87 326.2 320 52.2
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 8.5e-81 304.7 327 47.1
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 2.1e-79 300.1 326 46.9
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 1.0e-78 297.7 327 47.4
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 1.4e-78 297.4 327 46.5
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 2.3e-78 296.6 325 47.7
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 4.0e-78 295.8 325 47.7
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 4.1e-75 285.8 326 46.3
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 4.1e-75 285.8 326 46.3
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 4.1e-75 285.8 327 46.2
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 5.3e-75 285.4 323 45.2
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 3.5e-74 282.7 326 46.0
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 3.5e-74 282.7 326 46.0
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.9e-72 276.9 319 46.1
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 2.1e-71 273.5 240 57.9
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 6.1e-71 271.9 328 43.0
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 1.5e-61 240.7 326 42.0
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 3.5e-58 229.6 208 53.4
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 5.0e-57 225.7 317 37.9
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 1.4e-46 191.0 245 42.0
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 3.6e-31 139.8 141 48.2


User provided reference genes

Program Settings