Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.7e-187 659.1 312 100.0
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 8.9e-184 646.7 312 98.4
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 4.3e-138 495.0 300 78.3
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 3.0e-131 472.2 301 71.8
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 4.3e-130 468.4 282 77.7
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 8.8e-115 417.5 276 69.9
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.1e-114 417.2 278 68.3
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 9.7e-114 414.1 284 67.3
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 1.7e-113 413.3 299 63.9
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 1.7e-113 413.3 282 67.0
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 1.7e-113 413.3 274 69.0
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 3.7e-113 412.1 279 65.9
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 9.1e-112 407.5 274 67.9
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 1.2e-111 407.1 270 68.5
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 2.9e-110 402.5 274 67.9
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 3.8e-110 402.1 305 59.7
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 5.0e-110 401.7 292 63.4
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 1.1e-109 400.6 274 67.5
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 1.4e-109 400.2 274 66.1
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.9e-109 399.8 274 65.7
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 1.6e-108 396.7 275 66.9
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 2.7e-108 396.0 274 65.7
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 6.1e-108 394.8 273 67.4
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 1.0e-107 394.0 274 66.4
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 2.3e-107 392.9 278 65.1
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 2.3e-107 392.9 277 65.7
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 1.7e-105 386.7 279 65.2
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 2.8e-105 386.0 276 65.2
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 6.3e-105 384.8 285 63.2
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 8.2e-105 384.4 274 65.0
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 2.4e-104 382.9 276 64.5
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 4.1e-104 382.1 274 63.5
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 5.3e-104 381.7 301 59.8
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 1.2e-103 380.6 273 64.5
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 3.5e-103 379.0 274 63.5
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 3.5e-103 379.0 277 63.2
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 4.5e-103 378.6 282 61.7
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 5.0e-102 375.2 277 62.5
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 6.5e-102 374.8 274 63.5
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 4.7e-100 368.6 270 62.2
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 4.7e-100 368.6 282 61.3
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 4.7e-100 368.6 272 63.6
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 6.1e-100 368.2 270 62.2
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 4.0e-99 365.5 274 60.9
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 5.2e-99 365.2 270 61.9
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 3.3e-98 362.5 284 62.0
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 1.7e-97 360.1 275 61.8
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 3.7e-97 359.0 283 60.4
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 6.3e-97 358.2 274 59.1
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 1.8e-96 356.7 274 60.9
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 7.7e-95 351.3 236 69.5
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 1.5e-93 347.1 281 59.1
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 1.5e-93 347.1 281 59.1
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 1.5e-93 347.1 281 59.1
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 2.5e-93 346.3 275 58.2
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 3.2e-93 345.9 287 58.9
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 2.7e-92 342.8 281 59.1
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 1.0e-91 340.9 227 68.7
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 6.8e-91 338.2 288 55.6
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 6.8e-91 338.2 282 58.2
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.5e-90 337.0 279 56.3
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 3.7e-89 332.4 268 55.6
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 3.7e-89 332.4 283 54.1
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 4.5e-87 325.5 227 63.4
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 7.7e-87 324.7 293 54.9
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 1.7e-86 323.6 277 54.9
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 1.5e-85 320.5 302 51.7
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.5e-85 320.5 268 53.7
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 1.2e-84 317.4 274 55.1
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.0e-83 314.3 274 56.2
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 1.5e-82 310.5 228 62.7
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 4.9e-81 305.4 236 60.2
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 1.9e-77 293.5 313 46.3
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 3.6e-76 289.3 235 57.0
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 5.4e-72 275.4 181 66.9
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 2.7e-71 273.1 179 72.1
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 1.3e-70 270.8 331 42.0
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 2.3e-70 270.0 276 47.5
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.4e-64 250.0 191 61.3
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 5.4e-64 248.8 182 61.0
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 1.2e-63 247.7 283 42.8
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 5.0e-62 242.3 171 69.0
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 1.5e-61 240.7 167 67.1
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 2.5e-61 240.0 281 42.0
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 1.4e-59 234.2 182 60.4
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.9e-53 213.8 191 50.8
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 5.2e-51 205.7 255 42.4
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 1.2e-50 204.5 276 39.9
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 2.7e-47 193.4 234 42.7
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 3.0e-46 189.9 135 60.7
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 7.3e-45 185.3 283 34.3
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 4.0e-43 179.5 111 68.5
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 3.3e-37 159.8 134 59.0
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 2.1e-36 157.1 153 53.6
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 1.7e-33 147.5 312 30.8
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 1.1e-32 144.8 85 77.6
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 8.1e-28 128.6 74 78.4
SEGI_12071 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 2.7e-23 113.6 118 44.1
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 3.1e-19 100.1 257 27.2
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 3.9e-14 83.2 80 51.2
TAR636G1493 Trochodendron aralioides HOM05D007318 ORTHO05D009289 2.5e-13 80.5 54 64.8
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 2.0e-10 70.9 278 23.0
MBI13_g44208_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 7.6e-10 68.9 40 67.5
AUR62037021 Chenopodium quinoa HOM05D005118 ORTHO05D006038 2.9e-09 67.0 261 23.0
Sc02g0000340 Simmondsia chinensis HOM05D005118 ORTHO05D006038 3.8e-09 66.6 249 22.5
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 8.5e-09 65.5 74 44.6
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 5.5e-08 62.8 39 64.1
Sed0011362 Sechium edule HOM05D005118 ORTHO05D006038 7.2e-08 62.4 169 24.9
MELO3C011647.2 Cucumis melo HOM05D005118 ORTHO05D006038 9.3e-08 62.0 169 24.9
ClCG08G004490 Citrullus lanatus HOM05D005118 ORTHO05D006038 3.6e-07 60.1 185 23.8
Migut.J01020 Erythranthe guttata HOM05D005118 ORTHO05D006038 3.6e-07 60.1 219 23.3
CsaV3_6G003860 Cucumis sativus L. HOM05D005118 ORTHO05D006038 4.6e-07 59.7 169 24.3
DCAR_013399 Daucus carota HOM05D005118 ORTHO05D006038 7.9e-07 58.9 167 25.7
CAN.G397.66 Capsicum annuum HOM05D005118 ORTHO05D006038 1.0e-06 58.5 248 23.0
Oeu017686.1 Olea europaea HOM05D005118 ORTHO05D006038 1.0e-06 58.5 158 26.6
Peaxi162Scf00102g00213 Petunia axillaris HOM05D005118 ORTHO05D006038 1.0e-06 58.5 250 24.8
PSO063G5626 Papaver somniferum HOM05D005118 ORTHO05D006038 2.3e-06 57.4 156 23.7
PSO782G2273 Papaver somniferum HOM05D005118 ORTHO05D006038 3.0e-06 57.0 156 23.7
Nn2g14484 Nelumbo nucifera HOM05D005118 ORTHO05D006038 3.9e-06 56.6 224 23.2
Glyma.13G154600 Glycine max HOM05D005118 ORTHO05D006038 5.1e-06 56.2 227 25.1
EL10Ac7g16902 Beta vulgaris HOM05D001354 ORTHO05D007486 6.7e-06 55.8 161 23.0
SalBow3G3316 Salvia bowleyana HOM05D005118 ORTHO05D006038 6.7e-06 55.8 243 24.3
Solyc09g009960.3 Solanum lycopersicum HOM05D005118 ORTHO05D006038 8.7e-06 55.5 246 22.8


User provided reference genes

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