Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001048 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 8.5e-63 243.4 117 100.0
CSS0044783 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 3.8e-31 138.3 113 63.7
CSS0003960 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 8.0e-29 130.6 80 80.0
CSS0030508 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 2.0e-27 125.9 96 66.7
CSS0024056 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D110517 3.2e-17 92.0 82 63.4
Actinidia22891 Actinidia chinensis HOM05D001842 ORTHO05D001849 1.9e-06 56.2 22 100.0
CSS0039865 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D024698 1.9e-06 56.2 26 84.6
CSS0043241 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D001849 1.9e-06 56.2 23 95.7
Manes.01G155900 Manihot esculenta HOM05D001842 ORTHO05D001849 1.9e-06 56.2 22 100.0
TWI09G0475 Tripterygium wilfordii HOM05D001842 ORTHO05D001849 1.9e-06 56.2 22 100.0
vmacro20625 Vaccinium macrocarpon HOM05D001842 ORTHO05D001849 3.3e-06 55.5 22 95.5
Actinidia17353 Actinidia chinensis HOM05D001842 ORTHO05D001849 5.6e-06 54.7 22 95.5
CSS0024804 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
CSS0030981 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
Haze_02003 Corylus avellana HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
MBI05_g33293_MAGBIO Magnolia biondii HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
MD05G1135500 Malus domestica HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
PSO541G1162 Papaver somniferum HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
PSO675G7298 Papaver somniferum HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
Prupe.8G179600 Prunus persica HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
QL11p056280 Quercus lobata HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
Sed0008264 Sechium edule HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
Sed0023090 Sechium edule HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
Sc05g0006840 Simmondsia chinensis HOM05D001842 ORTHO05D001849 7.3e-06 54.3 22 95.5
Atru.chr3.124 Acer truncatum HOM05D001842 ORTHO05D001849 9.5e-06 53.9 22 90.9
Aqoxy6G01606 Aquilegia oxysepala HOM05D001842 ORTHO05D001849 9.5e-06 53.9 22 90.9
Nitab4.5_0001467g0060 Nicotiana tabacum HOM05D001842 ORTHO05D001849 9.5e-06 53.9 22 95.5
Nitab4.5_0007782g0070 Nicotiana tabacum HOM05D001842 ORTHO05D001849 9.5e-06 53.9 22 95.5
TWI53G0649 Tripterygium wilfordii HOM05D001842 ORTHO05D001849 9.5e-06 53.9 22 95.5


User provided reference genes

Program Settings