Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 7.7e-62 240.4 125 100.0
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 1.9e-52 209.1 121 87.6
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 1.0e-50 203.4 123 81.3
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 4.0e-50 201.4 121 83.5
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 1.4e-47 193.0 119 82.4
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 1.8e-47 192.6 121 79.3
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 9.4e-44 180.3 120 72.5
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 4.7e-43 177.9 121 71.1
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 1.4e-42 176.4 123 72.4
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 5.2e-42 174.5 123 67.5
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 2.0e-41 172.6 122 72.1
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 2.6e-41 172.2 121 68.6
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 5.7e-41 171.0 125 69.6
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 5.7e-41 171.0 124 68.5
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 1.7e-40 169.5 118 72.0
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 6.3e-40 167.5 124 67.7
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 6.3e-40 167.5 122 68.9
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 8.3e-40 167.2 121 68.6
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 8.3e-40 167.2 124 67.7
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 1.4e-39 166.4 124 66.9
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 1.8e-39 166.0 124 67.7
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 2.4e-39 165.6 121 66.1
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 4.1e-39 164.9 125 66.4
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 5.4e-39 164.5 111 70.3
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 7.0e-39 164.1 121 68.6
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 1.2e-38 163.3 122 67.2
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 1.6e-38 162.9 121 66.9
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 2.0e-38 162.5 122 68.0
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 2.0e-38 162.5 122 66.4
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 4.5e-38 161.4 118 67.8
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 7.7e-38 160.6 122 67.2
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.0e-37 160.2 118 66.1
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.3e-37 159.8 122 66.4
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.7e-37 159.5 122 66.4
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.7e-37 159.5 122 66.4
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 2.9e-37 158.7 124 66.9
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 2.9e-37 158.7 118 66.1
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 5.0e-37 157.9 124 63.7
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 8.6e-37 157.1 122 66.4
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 8.6e-37 157.1 122 66.4
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 8.6e-37 157.1 122 66.4
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 8.6e-37 157.1 122 66.4
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 1.1e-36 156.8 125 65.6
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 1.1e-36 156.8 117 65.8
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 1.1e-36 156.8 122 65.6
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 1.9e-36 156.0 125 64.8
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 1.9e-36 156.0 118 65.3
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.9e-36 156.0 122 66.4
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 1.9e-36 156.0 124 59.7
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 2.5e-36 155.6 124 62.1
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 3.3e-36 155.2 111 66.7
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 3.3e-36 155.2 122 65.6
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 5.5e-36 154.5 116 68.1
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 7.2e-36 154.1 118 64.4
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 1.2e-35 153.3 122 64.8
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 1.6e-35 152.9 122 64.8
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.6e-35 152.9 132 62.9
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 1.6e-35 152.9 111 66.7
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 1.6e-35 152.9 111 66.7
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 3.6e-35 151.8 124 60.5
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 4.7e-35 151.4 114 65.8
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 1.8e-34 149.4 159 54.1
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.0e-34 148.3 121 63.6
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 8.9e-34 147.1 135 56.3
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 2.0e-33 146.0 123 61.0
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.4e-33 144.8 121 62.8
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 5.7e-33 144.4 120 60.8
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 1.3e-32 143.3 121 58.7
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 8.3e-32 140.6 117 58.1
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 1.1e-31 140.2 148 55.4
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 1.8e-31 139.4 122 59.8
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 1.8e-31 139.4 122 59.8
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 1.8e-31 139.4 122 59.8
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 1.8e-31 139.4 122 59.8
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 1.8e-31 139.4 116 62.1
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 9.2e-31 137.1 116 61.2
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.2e-30 136.7 116 60.3
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 1.6e-30 136.3 118 58.5
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 2.7e-30 135.6 123 56.1
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 4.5e-30 134.8 124 55.6
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 1.7e-29 132.9 119 57.1
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 1.7e-29 132.9 116 59.5
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 2.9e-29 132.1 116 59.5
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 6.6e-29 131.0 122 58.2
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 6.6e-29 131.0 116 58.6
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.1e-28 130.2 107 66.4
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 1.5e-28 129.8 120 58.3
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 1.9e-28 129.4 87 71.3
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 6.1e-27 124.4 120 55.8
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 1.0e-26 123.6 227 37.0
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 1.2e-25 120.2 90 65.6
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 2.0e-25 119.4 93 63.4
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 2.0e-25 119.4 122 51.6
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 1.3e-24 116.7 86 70.9
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 2.9e-24 115.5 93 62.4
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 8.3e-24 114.0 85 65.9
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 8.3e-24 114.0 87 64.4
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.6e-22 109.8 85 62.4
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 2.7e-22 109.0 88 59.1
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.6e-22 108.2 85 61.2
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.6e-22 108.2 85 61.2
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 6.6e-21 104.4 113 50.4
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 2.5e-20 102.4 197 37.6
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 1.6e-19 99.8 106 54.7
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 4.7e-19 98.2 122 43.4
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 8.9e-18 94.0 82 59.8
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 4.9e-16 88.2 109 48.6
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 2.2e-08 62.8 78 46.2


User provided reference genes

Program Settings