Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001028 Camellia sinensis var. sinensis HOM05D004000 ORTHO05D004629 1.1e-49 199.5 94 100.0
CSS0003674 Camellia sinensis var. sinensis HOM05D004000 ORTHO05D004629 3.1e-39 164.9 94 87.2
CSS0018128 Camellia sinensis var. sinensis HOM05D004000 ORTHO05D004629 9.6e-33 143.3 78 88.5
CSS0040997 Camellia sinensis var. sinensis HOM05D004000 ORTHO05D004629 4.8e-32 141.0 78 87.2
CSS0037197 Camellia sinensis var. sinensis HOM05D004000 ORTHO05D004629 1.8e-31 139.0 127 61.4
CSS0038370 Camellia sinensis var. sinensis HOM05D004000 ORTHO05D004629 1.8e-31 139.0 127 61.4
Atru.chr1.77 Acer truncatum HOM05D004000 ORTHO05D004629 1.3e-29 132.9 124 59.7
QL04p091152 Quercus lobata HOM05D004000 ORTHO05D004629 2.9e-29 131.7 124 58.9
QL04p092275 Quercus lobata HOM05D004000 ORTHO05D004629 2.9e-29 131.7 124 58.9
vmacro09768 Vaccinium macrocarpon HOM05D004000 ORTHO05D004629 2.9e-29 131.7 125 59.2
CSS0006140 Camellia sinensis var. sinensis HOM05D004000 ORTHO05D004629 3.8e-29 131.3 124 58.9
unitig_744.g24504 Utricularia gibba HOM05D004000 ORTHO05D004629 3.8e-29 131.3 102 64.7
Actinidia37130 Actinidia chinensis HOM05D004000 ORTHO05D004629 4.9e-29 131.0 125 58.4
Nn8g41219 Nelumbo nucifera HOM05D004000 ORTHO05D004629 4.9e-29 131.0 102 64.7
Potri.008G083800 Populus trichocarpa HOM05D004000 ORTHO05D004629 4.9e-29 131.0 124 58.1
Oeu044963.4 Olea europaea HOM05D004000 ORTHO05D004629 6.4e-29 130.6 124 58.1
TWI38G0870 Tripterygium wilfordii HOM05D004000 ORTHO05D004629 6.4e-29 130.6 125 57.6
Aqoxy2G00201 Aquilegia oxysepala HOM05D004000 ORTHO05D004629 8.4e-29 130.2 124 57.3
MSTRG.14568 Avicennia marina HOM05D004000 ORTHO05D004629 8.4e-29 130.2 124 58.1
Cc05_g16490 Coffea canephora HOM05D004000 ORTHO05D004629 8.4e-29 130.2 102 64.7
HanXRQChr04g0125331 Helianthus annuus HOM05D004000 ORTHO05D004629 8.4e-29 130.2 102 62.7
vmacro11690 Vaccinium macrocarpon HOM05D004000 ORTHO05D004629 8.4e-29 130.2 124 58.9
CDE05G1666 Ceratophyllum demersum HOM05D004000 ORTHO05D004629 1.1e-28 129.8 103 63.1
Dinv19580 Davidia involucrata HOM05D004000 ORTHO05D004629 1.1e-28 129.8 124 57.3
Dinv42470 Davidia involucrata HOM05D004000 ORTHO05D004629 1.1e-28 129.8 124 57.3
Actinidia12763 Actinidia chinensis HOM05D004000 ORTHO05D004629 1.4e-28 129.4 104 64.4
Ciclev10005712m.g Citrus clementina HOM05D004000 ORTHO05D004629 1.4e-28 129.4 124 58.1
Nitab4.5_0000029g0230 Nicotiana tabacum HOM05D004000 ORTHO05D004629 1.4e-28 129.4 124 58.1
Nitab4.5_0006109g0060 Nicotiana tabacum HOM05D004000 ORTHO05D004629 1.4e-28 129.4 124 58.1
TAR627G0690 Trochodendron aralioides HOM05D004000 ORTHO05D004629 1.4e-28 129.4 124 57.3
Rhsim06G0243100 Rhododendron simsii HOM05D004000 ORTHO05D004629 1.9e-28 129.0 124 58.1
CDE05G0982 Ceratophyllum demersum HOM05D004000 ORTHO05D004629 2.5e-28 128.6 103 63.1
Eucgr.F01477 Eucalyptus grandis HOM05D004000 ORTHO05D004629 2.5e-28 128.6 124 58.1
Nn7g36133 Nelumbo nucifera HOM05D004000 ORTHO05D004629 2.5e-28 128.6 124 57.3
Sc10g0007870 Simmondsia chinensis HOM05D004000 ORTHO05D004629 2.5e-28 128.6 124 55.6
SGA_v2.0_scaffold49G18199 Striga asiatica HOM05D004000 ORTHO05D004629 2.5e-28 128.6 124 56.5
Actinidia24665 Actinidia chinensis HOM05D004000 ORTHO05D004629 3.2e-28 128.3 124 58.1
MSTRG.13084 Avicennia marina HOM05D004000 ORTHO05D004629 3.2e-28 128.3 124 56.5
CiPaw.11G059500 Carya illinoinensis HOM05D004000 ORTHO05D004629 3.2e-28 128.3 124 58.9
PSO339G1394 Papaver somniferum HOM05D004000 ORTHO05D004629 3.2e-28 128.3 102 62.7
PSO384G1790 Papaver somniferum HOM05D004000 ORTHO05D004629 3.2e-28 128.3 102 62.7
Sed0027108 Sechium edule HOM05D004000 ORTHO05D004629 3.2e-28 128.3 111 61.3
TWI59G1464 Tripterygium wilfordii HOM05D004000 ORTHO05D004629 3.2e-28 128.3 124 56.5
ECA236G3922 Erigeron canadensis HOM05D004000 ORTHO05D004629 4.2e-28 127.9 102 62.7
Lsat_1_v5_gn_7_110801 Lactuca sativa HOM05D004000 ORTHO05D004629 4.2e-28 127.9 104 61.5
Oeu034052.1 Olea europaea HOM05D004000 ORTHO05D004629 5.5e-28 127.5 101 63.4
DCAR_016849 Daucus carota HOM05D004000 ORTHO05D004629 7.1e-28 127.1 124 56.5
Manes.17G000700 Manihot esculenta HOM05D004000 ORTHO05D004629 7.1e-28 127.1 124 56.5
THA.LOC104810272 Tarenaya hassleriana HOM05D004000 ORTHO05D004629 7.1e-28 127.1 124 56.5
Phvul.005G049350 Phaseolus vulgaris HOM05D004000 ORTHO05D004629 9.3e-28 126.7 124 57.3
Solyc07g066650.4 Solanum lycopersicum HOM05D004000 ORTHO05D004629 9.3e-28 126.7 124 56.5
Sopen07g034800 Solanum pennellii HOM05D004000 ORTHO05D004629 9.3e-28 126.7 124 56.5
VMungo1080G1629 Vigna mungo HOM05D004000 ORTHO05D004629 9.3e-28 126.7 124 57.3
MELO3C012597.2 Cucumis melo HOM05D004000 ORTHO05D004629 1.2e-27 126.3 125 56.8
CsaV3_7G022990 Cucumis sativus L. HOM05D004000 ORTHO05D004629 1.2e-27 126.3 125 56.8
Migut.H01660 Erythranthe guttata HOM05D004000 ORTHO05D004629 1.2e-27 126.3 101 62.4
Peaxi162Scf00452g00229 Petunia axillaris HOM05D004000 ORTHO05D004629 1.2e-27 126.3 102 62.7
Ca_03197_v3 Cicer arietinum L. HOM05D004000 ORTHO05D004629 1.6e-27 125.9 102 62.7
Glyma.15G262200 Glycine max HOM05D004000 ORTHO05D004629 1.6e-27 125.9 102 62.7
Psat0s1441g0160 Pisum sativum HOM05D004000 ORTHO05D004629 1.6e-27 125.9 102 62.7
SGA_v2.0_scaffold239G44016 Striga asiatica HOM05D004000 ORTHO05D004629 1.6e-27 125.9 124 56.5
Prupe.4G131300 Prunus persica HOM05D004000 ORTHO05D004629 2.1e-27 125.6 102 61.8
HPP92_020395 Vanilla planifolia HOM05D004000 ORTHO05D004629 2.1e-27 125.6 124 54.8
GSVIVG01036747001 Vitis vinifera HOM05D004000 ORTHO05D004629 2.1e-27 125.6 102 62.7
Cpa.g.sc32.66 Carica papaya HOM05D004000 ORTHO05D004629 2.7e-27 125.2 124 56.5
Glyma.08G164900 Glycine max HOM05D004000 ORTHO05D004629 2.7e-27 125.2 124 56.5
ClCG09G022790 Citrullus lanatus HOM05D004000 ORTHO05D004629 3.5e-27 124.8 102 62.7
Duzib213G0764 Durio zibethinus HOM05D004000 ORTHO05D004629 3.5e-27 124.8 124 56.5
Lalb_Chr01g0015521 Lupinus albus HOM05D004000 ORTHO05D004629 3.5e-27 124.8 124 55.6
Sed0027383 Sechium edule HOM05D004000 ORTHO05D004629 3.5e-27 124.8 124 55.6
CANSAT56G1070 Cannabis sativa HOM05D004000 ORTHO05D004629 4.6e-27 124.4 124 55.6
MD05G1234900 Malus domestica HOM05D004000 ORTHO05D004629 4.6e-27 124.4 124 54.8
Os06g0233400 Oryza sativa ssp. japonica HOM05D004000 ORTHO05D004629 6.0e-27 124.0 125 54.4
TPR.G27463 Trifolium pratense HOM05D004000 ORTHO05D004629 6.0e-27 124.0 102 61.8
Gohir.D08G252100 Gossypium hirsutum HOM05D004000 ORTHO05D004629 7.9e-27 123.6 124 54.8
unitig_61.g26121 Utricularia gibba HOM05D004000 ORTHO05D004629 7.9e-27 123.6 124 54.8
arahy.Tifrunner.gnm1.ann1.UQZ7YG Arachis hypogaea HOM05D004000 ORTHO05D004629 1.0e-26 123.2 124 55.6
ECA240G0236 Erigeron canadensis HOM05D004000 ORTHO05D004629 1.0e-26 123.2 102 59.8
Lalb_Chr20g0108471 Lupinus albus HOM05D004000 ORTHO05D004629 1.3e-26 122.9 124 54.8
Gohir.A08G231700 Gossypium hirsutum HOM05D004000 ORTHO05D004629 1.8e-26 122.5 101 60.4
Medtr2g064415 Medicago truncatula HOM05D004000 ORTHO05D004629 1.8e-26 122.5 102 60.8
RcHm_v2.0_Chr5g0024051 Rosa chinensis HOM05D004000 ORTHO05D004629 1.8e-26 122.5 124 52.4
Thecc.07G186500 Theobroma cacao HOM05D004000 ORTHO05D004629 1.8e-26 122.5 124 54.8
TAR629G3216 Trochodendron aralioides HOM05D004000 ORTHO05D004629 1.8e-26 122.5 124 55.6
Gorai.004G268800 Gossypium raimondii HOM05D004000 ORTHO05D004629 2.3e-26 122.1 124 54.0
Lj3g0014191 Lotus japonicus HOM05D004000 ORTHO05D004629 3.0e-26 121.7 124 54.8
arahy.Tifrunner.gnm1.ann1.U2QCB7 Arachis hypogaea HOM05D004000 ORTHO05D004629 3.9e-26 121.3 129 53.5
FAN25G1212 Fragaria x ananassa HOM05D004000 ORTHO05D004629 3.9e-26 121.3 124 51.6
THA.LOC104816986 Tarenaya hassleriana HOM05D004000 ORTHO05D004629 3.9e-26 121.3 124 52.4
FAN11G2975 Fragaria x ananassa HOM05D004000 ORTHO05D004629 5.1e-26 120.9 124 50.8
FAN16G0250 Fragaria x ananassa HOM05D004000 ORTHO05D004629 5.1e-26 120.9 124 50.8
FAN21G3980 Fragaria x ananassa HOM05D004000 ORTHO05D004629 5.1e-26 120.9 124 50.8
HanXRQChr13g0408851 Helianthus annuus HOM05D004000 ORTHO05D004629 6.7e-26 120.6 111 57.7
Ah.01g015680 Amaranthus hybridus HOM05D004000 ORTHO05D004629 8.7e-26 120.2 103 58.3
Duzib187G0240 Durio zibethinus HOM05D004000 ORTHO05D004629 8.7e-26 120.2 124 54.8
Zm00001eb194650 Zea mays HOM05D004000 ORTHO05D004629 8.7e-26 120.2 125 52.8
EL10Ac2g03287 Beta vulgaris HOM05D004000 ORTHO05D004629 1.1e-25 119.8 103 58.3
SalBow1G7638 Salvia bowleyana HOM05D004000 ORTHO05D004629 1.1e-25 119.8 146 50.7
Zm00001eb279840 Zea mays HOM05D004000 ORTHO05D004629 1.5e-25 119.4 124 53.2
CARHR087290 Cardamine hirsuta HOM05D004000 ORTHO05D004629 1.9e-25 119.0 111 57.7
Duzib268G1547 Durio zibethinus HOM05D004000 ORTHO05D004629 2.5e-25 118.6 124 53.2
Pp3c10_17770 Physcomitrium patens HOM05D004000 ORTHO05D004629 3.3e-25 118.2 102 57.8
Thhalv10021347m.g Eutrema salsugineum HOM05D004000 ORTHO05D004629 5.6e-25 117.5 111 55.9
Mapoly0065s0055 Marchantia polymorpha HOM05D004000 ORTHO05D004629 5.6e-25 117.5 102 55.9
Sp3g10920 Schrenkiella parvula HOM05D004000 ORTHO05D004629 5.6e-25 117.5 111 55.9
BcaB06g25514 Brassica carinata HOM05D004000 ORTHO05D004629 7.4e-25 117.1 124 50.8
BcaC05g29239 Brassica carinata HOM05D004000 ORTHO05D004629 7.4e-25 117.1 124 51.6
C05p55150 Brassica napus HOM05D004000 ORTHO05D004629 7.4e-25 117.1 124 51.6
BolC5t34183H Brassica oleracea HOM05D004000 ORTHO05D004629 7.4e-25 117.1 124 51.6
BraA05t22474Z Brassica rapa HOM05D004000 ORTHO05D004629 7.4e-25 117.1 124 51.6
MD10G1211100 Malus domestica HOM05D004000 ORTHO05D004629 7.4e-25 117.1 123 51.2
BcaB04g18717 Brassica carinata HOM05D001323 ORTHO05D001223 9.6e-25 116.7 111 55.9
Lj2C12T8 Lonicera japonica HOM05D004000 ORTHO05D004629 1.3e-24 116.3 95 63.2
A03p37780 Brassica napus HOM05D001323 ORTHO05D001223 1.6e-24 115.9 111 54.1
AT3G12760 Arabidopsis thaliana HOM05D004000 ORTHO05D004629 2.1e-24 115.5 124 51.6
BcaC01g04031 Brassica carinata HOM05D001323 ORTHO05D001223 2.1e-24 115.5 111 55.0
A01p40750 Brassica napus HOM05D004000 ORTHO05D004629 2.1e-24 115.5 124 50.8
A05p36700 Brassica napus HOM05D004000 ORTHO05D004629 2.1e-24 115.5 124 50.8
C03p45850 Brassica napus HOM05D001323 ORTHO05D001223 2.1e-24 115.5 101 55.4
BraA01t04109Z Brassica rapa HOM05D004000 ORTHO05D004629 2.1e-24 115.5 124 50.8
BolC3t16860H Brassica oleracea HOM05D001323 ORTHO05D001223 2.8e-24 115.2 111 54.1
BraA03t12933Z Brassica rapa HOM05D001323 ORTHO05D001223 2.8e-24 115.2 111 54.1
Aa31LG8G60 Aethionema arabicum HOM05D004000 ORTHO05D004629 4.8e-24 114.4 134 48.5
BcaC09g48261 Brassica carinata HOM05D004000 ORTHO05D004629 4.8e-24 114.4 124 50.8
C01p52380 Brassica napus HOM05D004000 ORTHO05D004629 4.8e-24 114.4 101 56.4
Carub.0003s1212 Capsella rubella HOM05D004000 ORTHO05D004629 4.8e-24 114.4 124 54.8
Pp3c12_24690 Physcomitrium patens HOM05D004000 ORTHO05D004629 6.2e-24 114.0 102 54.9
AL3G24440 Arabidopsis lyrata HOM05D004000 ORTHO05D004629 8.2e-24 113.6 124 50.8
BolC1t05181H Brassica oleracea HOM05D004000 ORTHO05D004629 1.1e-23 113.2 113 54.0
AagrBONN_evm.TU.Sc2ySwM_117.2611 Anthoceros agrestis HOM05D004000 ORTHO05D004629 1.4e-23 112.8 102 53.9
BcaB04g21038 Brassica carinata HOM05D004000 ORTHO05D004629 1.8e-23 112.5 111 53.2
SMO364G0004 Selaginella moellendorffii HOM05D004000 ORTHO05D004629 1.8e-23 112.5 92 59.8
Aa31LG10G40 Aethionema arabicum HOM05D004000 ORTHO05D004629 2.4e-23 112.1 124 51.6
Nitab4.5_0000388g0080 Nicotiana tabacum HOM05D004000 ORTHO05D004629 2.4e-23 112.1 102 53.9
Peaxi162Scf00006g01617 Petunia axillaris HOM05D004000 ORTHO05D004629 2.4e-23 112.1 102 53.9
Pp3c3_33500 Physcomitrium patens HOM05D004000 ORTHO05D004629 2.4e-23 112.1 102 56.9
Nitab4.5_0002597g0020 Nicotiana tabacum HOM05D004000 ORTHO05D004629 3.1e-23 111.7 102 52.9
CBR_g22391 Chara braunii HOM05D004000 ORTHO05D004629 4.0e-23 111.3 103 53.4
PGR004G2637 Punica granatum HOM05D004000 ORTHO05D004629 5.3e-23 110.9 122 52.5
Gorai.009G353900 Gossypium raimondii HOM05D004000 ORTHO05D004629 3.8e-21 104.8 124 46.8
ATR0605G256 Amborella trichopoda HOM05D004000 ORTHO05D004629 6.5e-21 104.0 90 58.9
RcHm_v2.0_Chr2g0106621 Rosa chinensis HOM05D004000 ORTHO05D004629 2.5e-20 102.1 104 50.0
Sopen12g008120 Solanum pennellii HOM05D004000 ORTHO05D004629 2.5e-20 102.1 102 48.0
PGSC0003DMG400009664 Solanum tuberosum HOM05D004000 ORTHO05D004629 3.2e-20 101.7 102 47.1
Solyc12g017310.3 Solanum lycopersicum HOM05D004000 ORTHO05D004629 5.5e-20 100.9 102 47.1
FAN19G2643 Fragaria x ananassa HOM05D004000 ORTHO05D004629 2.7e-19 98.6 104 50.0
FAN23G0482 Fragaria x ananassa HOM05D000049 ORTHO05D004629 2.7e-19 98.6 104 50.0
FAN26G0293 Fragaria x ananassa HOM05D004000 ORTHO05D004629 2.7e-19 98.6 104 50.0
CAN.G321.32 Capsicum annuum HOM05D004000 ORTHO05D004629 3.5e-19 98.2 102 46.1
FvH4_1g16700 Fragaria vesca HOM05D000049 ORTHO05D004629 2.3e-18 95.5 104 49.0
FAN28G2261 Fragaria x ananassa HOM05D004000 ORTHO05D004629 6.7e-18 94.0 104 48.1
Hund20115 Selenicereus undatus HOM05D004000 ORTHO05D004629 1.1e-17 93.2 61 68.9
BcaC01g04032 Brassica carinata HOM05D004000 ORTHO05D004629 1.8e-15 85.9 51 70.6
Cre12.g487400 Chlamydomonas reinhardtii HOM05D004000 ORTHO05D004629 3.1e-15 85.1 103 43.7
FAN28G0737 Fragaria x ananassa HOM05D004000 ORTHO05D004629 3.4e-14 81.6 93 49.5
SMO198G0075 Selaginella moellendorffii HOM05D004000 ORTHO05D004629 2.5e-12 75.5 51 62.7
SEGI_20471 Sequoiadendron giganteum HOM05D004000 ORTHO05D004629 7.2e-12 73.9 34 94.1
AUR62037658 Chenopodium quinoa HOM05D004000 ORTHO05D004629 9.4e-12 73.6 34 88.2
AUR62040875 Chenopodium quinoa HOM05D004000 ORTHO05D004629 9.4e-12 73.6 34 88.2
Cre01.g014850 Chlamydomonas reinhardtii HOM05D004000 ORTHO05D004629 1.0e-10 70.1 107 36.4
PRCOL_00005347 Prasinoderma coloniale HOM05D004000 ORTHO05D004629 1.4e-10 69.7 102 34.3
Gohir.D05G330150 Gossypium hirsutum HOM05D004000 ORTHO05D004629 4.3e-09 64.7 102 40.2
CAN.G106.17 Capsicum annuum HOM05D004000 ORTHO05D000001 1.4e-07 59.7 31 74.2
Actinidia25397 Actinidia chinensis HOM05D004000 ORTHO05D004629 9.1e-07 57.0 94 40.4
FvH4_3g14590 Fragaria vesca HOM05D004000 ORTHO05D004629 1.2e-06 56.6 89 36.0
Rhsim04G0003200 Rhododendron simsii HOM05D004000 ORTHO05D004629 1.5e-06 56.2 26 96.2
Oeu034053.1 Olea europaea HOM05D004000 ORTHO05D004629 4.5e-06 54.7 25 96.0
TAR627G0782 Trochodendron aralioides HOM05D004000 ORTHO05D004629 5.9e-06 54.3 45 60.0


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