Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.9e-50 202.2 104 100.0
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 2.3e-43 178.7 102 89.2
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 1.1e-42 176.4 104 87.5
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 1.6e-41 172.6 103 83.5
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 2.1e-41 172.2 102 86.3
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 3.1e-40 168.3 104 82.7
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 1.7e-38 162.5 102 82.4
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 8.4e-38 160.2 99 83.8
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 1.4e-37 159.5 104 76.0
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 1.4e-37 159.5 104 76.9
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 1.9e-37 159.1 107 79.4
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 2.4e-37 158.7 100 82.0
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 1.2e-36 156.4 103 76.7
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 2.7e-36 155.2 109 75.2
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 6.0e-36 154.1 102 77.5
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 6.0e-36 154.1 102 75.5
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 7.9e-36 153.7 105 78.1
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 7.9e-36 153.7 102 77.5
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 1.0e-35 153.3 100 80.0
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 1.3e-35 152.9 100 77.0
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 1.8e-35 152.5 100 79.0
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 1.8e-35 152.5 102 76.5
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 1.8e-35 152.5 102 76.5
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 3.0e-35 151.8 105 77.1
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 3.0e-35 151.8 102 76.5
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.9e-35 151.4 105 77.1
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 5.1e-35 151.0 105 76.2
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 8.7e-35 150.2 104 75.0
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 8.7e-35 150.2 104 74.0
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 2.5e-34 148.7 104 75.0
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 3.3e-34 148.3 104 71.2
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 4.3e-34 147.9 96 78.1
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 7.4e-34 147.1 102 73.5
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 9.6e-34 146.7 103 70.9
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 9.6e-34 146.7 104 72.1
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 1.6e-33 146.0 104 75.0
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 2.1e-33 145.6 106 77.4
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 2.1e-33 145.6 102 73.5
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 2.1e-33 145.6 104 68.3
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.8e-33 145.2 109 70.6
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 2.8e-33 145.2 104 72.1
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 3.7e-33 144.8 108 70.4
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 6.2e-33 144.1 104 74.0
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 6.2e-33 144.1 103 74.8
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 8.1e-33 143.7 109 69.7
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 1.4e-32 142.9 104 74.0
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.8e-32 142.5 109 69.7
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 4.0e-32 141.4 107 69.2
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 5.3e-32 141.0 102 70.6
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 6.9e-32 140.6 105 70.5
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 1.2e-31 139.8 102 70.6
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 1.2e-31 139.8 102 70.6
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 1.2e-31 139.8 102 72.5
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 1.2e-31 139.8 102 70.6
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 1.5e-31 139.4 102 70.6
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 2.6e-31 138.7 101 70.3
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 3.4e-31 138.3 109 67.9
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 4.5e-31 137.9 102 69.6
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 5.8e-31 137.5 101 70.3
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.0e-30 136.7 101 69.3
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 1.3e-30 136.3 102 68.6
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 1.3e-30 136.3 102 68.6
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 1.3e-30 136.3 102 68.6
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 1.3e-30 136.3 102 68.6
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 2.2e-30 135.6 104 67.3
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 3.8e-30 134.8 102 68.6
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 6.5e-30 134.0 122 63.9
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 8.4e-30 133.7 104 67.3
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 8.4e-30 133.7 107 68.2
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 1.1e-29 133.3 98 71.4
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 2.5e-29 132.1 104 65.4
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 9.3e-29 130.2 95 71.6
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 2.7e-28 128.6 104 65.4
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 6.0e-28 127.5 103 68.0
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 7.9e-28 127.1 104 65.4
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 1.0e-27 126.7 104 63.5
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 3.0e-27 125.2 104 63.5
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 5.1e-27 124.4 104 62.5
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 1.1e-26 123.2 96 69.8
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 1.5e-26 122.9 103 63.1
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 1.5e-26 122.9 106 61.3
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 4.3e-26 121.3 102 64.7
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 1.4e-24 116.3 67 89.6
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 3.1e-24 115.2 100 64.0
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 4.1e-24 114.8 113 57.5
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 5.3e-24 114.4 103 60.2
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 1.5e-23 112.8 107 58.9
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 2.0e-23 112.5 68 77.9
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 4.5e-23 111.3 81 74.1
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 1.0e-22 110.2 89 64.0
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 3.8e-22 108.2 67 85.1
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 5.5e-21 104.4 67 82.1
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 1.6e-20 102.8 79 69.6
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 4.6e-20 101.3 79 68.4
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 4.6e-20 101.3 64 81.2
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 2.3e-19 99.0 61 82.0
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 2.3e-19 99.0 67 77.6
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 2.5e-18 95.5 65 76.9
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 3.3e-18 95.1 104 54.8
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 1.3e-17 93.2 87 59.8
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 1.8e-16 89.4 50 90.0
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 1.8e-16 89.4 50 92.0
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 2.4e-16 89.0 60 81.7
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 5.3e-16 87.8 52 88.5
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.3e-14 83.2 53 86.8
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 2.2e-14 82.4 149 42.3
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 1.9e-13 79.3 53 77.4
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 1.4e-08 63.2 104 38.5
SMO203G0278 Selaginella moellendorffii HOM05D000001 ORTHO05D375656 3.4e-07 58.5 61 55.7


User provided reference genes

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