Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000980 Camellia sinensis var. sinensis HOM05D001089 ORTHO05D000920 1.2e-135 486.5 245 100.0
CSS0025559 Camellia sinensis var. sinensis HOM05D001089 ORTHO05D000920 1.0e-54 217.6 115 99.1
Dinv06074 Davidia involucrata HOM05D001089 ORTHO05D000920 1.2e-45 187.6 209 56.5
GSVIVG01026493001 Vitis vinifera HOM05D001089 ORTHO05D000920 2.6e-45 186.4 195 59.0
Dinv00316 Davidia involucrata HOM05D001089 ORTHO05D000920 3.2e-43 179.5 205 56.1
CSS0037744 Camellia sinensis var. sinensis HOM05D001089 ORTHO05D000920 9.2e-43 177.9 115 82.6
Dinv24348 Davidia involucrata HOM05D001089 ORTHO05D000920 9.2e-43 177.9 205 56.6
Hma1.2p1_0476F.1_g160890 Hydrangea macrophylla HOM05D001089 ORTHO05D000920 3.3e-40 169.5 194 53.6
TAR625G0745 Trochodendron aralioides HOM05D001089 ORTHO05D000920 2.2e-36 156.8 217 48.8
Actinidia06627 Actinidia chinensis HOM05D001089 ORTHO05D000920 1.1e-35 154.5 202 50.5
vmacro18665 Vaccinium macrocarpon HOM05D001089 ORTHO05D000920 7.0e-35 151.8 201 51.2
Rhsim08G0003000 Rhododendron simsii HOM05D001089 ORTHO05D000920 7.8e-34 148.3 202 51.5
Haze_25224 Corylus avellana HOM05D001089 ORTHO05D000920 1.3e-33 147.5 196 52.0
Peaxi162Scf00589g00417 Petunia axillaris HOM05D001089 ORTHO05D000920 3.0e-33 146.4 183 48.1
Lj2A605T66 Lonicera japonica HOM05D001089 ORTHO05D000920 8.6e-33 144.8 176 51.1
Hund07258 Selenicereus undatus HOM05D001089 ORTHO05D000920 1.9e-32 143.7 225 43.6
PGSC0003DMG400028664 Solanum tuberosum HOM05D001089 ORTHO05D000920 1.9e-32 143.7 187 48.1
CiPaw.03G122500 Carya illinoinensis HOM05D001089 ORTHO05D000920 1.6e-31 140.6 213 47.9
Sopen11g001890 Solanum pennellii HOM05D001089 ORTHO05D000920 2.8e-31 139.8 187 47.1
CANSAT01G2678 Cannabis sativa HOM05D001089 ORTHO05D000920 4.7e-31 139.0 205 47.3
Nn5g28573 Nelumbo nucifera HOM05D001089 ORTHO05D000920 4.7e-31 139.0 222 45.5
Manes.13G083500 Manihot esculenta HOM05D001089 ORTHO05D000920 8.1e-31 138.3 215 44.7
ClCG01G015410 Citrullus lanatus HOM05D001089 ORTHO05D000920 1.1e-30 137.9 216 44.9
Solyc11g005950.2 Solanum lycopersicum HOM05D001089 ORTHO05D000920 1.4e-30 137.5 183 47.5
QL06p028744 Quercus lobata HOM05D001089 ORTHO05D000920 4.0e-30 136.0 192 49.0
CiPaw.04G082900 Carya illinoinensis HOM05D001089 ORTHO05D000920 5.2e-30 135.6 189 47.6
MELO3C008057.2 Cucumis melo HOM05D001089 ORTHO05D000920 6.8e-30 135.2 218 45.0
CsaV3_6G041630 Cucumis sativus L. HOM05D001089 ORTHO05D000920 6.8e-30 135.2 218 45.0
Sed0015585 Sechium edule HOM05D001089 ORTHO05D000920 6.8e-30 135.2 219 44.3
MD15G1343000 Malus domestica HOM05D001089 ORTHO05D000920 1.2e-29 134.4 201 46.3
Eucgr.I00209 Eucalyptus grandis HOM05D001089 ORTHO05D000920 1.5e-29 134.0 220 44.1
CAN.G652.10 Capsicum annuum HOM05D001089 ORTHO05D000920 2.0e-29 133.7 190 44.7
RcHm_v2.0_Chr2g0120761 Rosa chinensis HOM05D001089 ORTHO05D000920 2.6e-29 133.3 206 48.1
Sabra05G0050400 Salix brachista HOM05D001089 ORTHO05D000920 4.4e-29 132.5 221 43.0
AUR62000494 Chenopodium quinoa HOM05D001089 ORTHO05D000920 5.8e-29 132.1 214 44.4
FAN23G0235 Fragaria x ananassa HOM05D001089 ORTHO05D000920 1.3e-28 131.0 195 47.7
FAN23G1912 Fragaria x ananassa HOM05D001089 ORTHO05D000920 1.3e-28 131.0 195 47.7
FAN26G1131 Fragaria x ananassa HOM05D001089 ORTHO05D000920 1.3e-28 131.0 201 46.8
Nn1g06255 Nelumbo nucifera HOM05D001089 ORTHO05D000920 1.3e-28 131.0 221 43.9
Nitab4.5_0000856g0030 Nicotiana tabacum HOM05D001089 ORTHO05D000920 2.2e-28 130.2 190 45.3
Migut.H00726 Erythranthe guttata HOM05D001089 ORTHO05D000920 4.9e-28 129.0 148 52.7
TAR381G1408 Trochodendron aralioides HOM05D001089 ORTHO05D000920 4.9e-28 129.0 215 45.6
Sabra07G0089400 Salix brachista HOM05D001089 ORTHO05D000920 6.4e-28 128.6 192 43.2
TWI79G0009 Tripterygium wilfordii HOM05D001089 ORTHO05D000920 8.3e-28 128.3 209 43.1
Cpa.g.sc42.147 Carica papaya HOM05D001089 ORTHO05D000920 1.1e-27 127.9 200 44.5
AUR62006839 Chenopodium quinoa HOM05D001089 ORTHO05D000920 1.4e-27 127.5 192 45.8
arahy.Tifrunner.gnm1.ann1.DVCH10 Arachis hypogaea HOM05D001089 ORTHO05D000920 1.9e-27 127.1 218 42.7
Psat0s145g0080 Pisum sativum HOM05D001089 ORTHO05D000920 1.9e-27 127.1 205 43.4
Ca_16942_v3 Cicer arietinum L. HOM05D001089 ORTHO05D000920 2.4e-27 126.7 206 42.7
Ca_16961_v3 Cicer arietinum L. HOM05D001089 ORTHO05D000920 2.4e-27 126.7 206 42.7
Manes.12G154700 Manihot esculenta HOM05D001089 ORTHO05D000920 2.4e-27 126.7 211 42.7
Potri.005G058700 Populus trichocarpa HOM05D001089 ORTHO05D000920 2.4e-27 126.7 221 42.1
arahy.Tifrunner.gnm1.ann1.8KPX0U Arachis hypogaea HOM05D001089 ORTHO05D000920 4.1e-27 125.9 218 43.1
EL10Ac4g09595 Beta vulgaris HOM05D001089 ORTHO05D000920 5.4e-27 125.6 192 47.4
FvH4_1g24270 Fragaria vesca HOM05D001089 ORTHO05D000920 5.4e-27 125.6 197 46.2
FAN19G0489 Fragaria x ananassa HOM05D001089 ORTHO05D000920 7.1e-27 125.2 192 46.4
Thecc.01G131000 Theobroma cacao HOM05D001089 ORTHO05D000920 7.1e-27 125.2 197 44.7
DCAR_001343 Daucus carota HOM05D001089 ORTHO05D000920 1.6e-26 124.0 177 45.8
SalBow1G1293 Salvia bowleyana HOM05D001089 ORTHO05D000920 1.6e-26 124.0 218 43.1
Cc07_g18410 Coffea canephora HOM05D001089 ORTHO05D000920 2.7e-26 123.2 201 41.8
PGR079G0003 Punica granatum HOM05D001089 ORTHO05D000920 3.5e-26 122.9 216 44.0
PGR119G0584 Punica granatum HOM05D001089 ORTHO05D000920 3.5e-26 122.9 216 44.0
TWI75G1424 Tripterygium wilfordii HOM05D001089 ORTHO05D000920 4.6e-26 122.5 207 44.9
Duzib187G1565 Durio zibethinus HOM05D001089 ORTHO05D000920 6.0e-26 122.1 190 46.3
arahy.Tifrunner.gnm1.ann1.0Z2KWF Arachis hypogaea HOM05D001089 ORTHO05D000920 1.0e-25 121.3 222 42.3
arahy.Tifrunner.gnm1.ann1.1K4FZB Arachis hypogaea HOM05D001089 ORTHO05D000920 1.3e-25 120.9 222 41.9
Medtr3g096160 Medicago truncatula HOM05D001089 ORTHO05D000920 1.7e-25 120.6 204 40.2
Lj1g0012030 Lotus japonicus HOM05D001089 ORTHO05D000920 2.3e-25 120.2 197 41.1
MSTRG.2658 Avicennia marina HOM05D001089 ORTHO05D000920 3.0e-25 119.8 148 48.0
Duzib264G1113 Durio zibethinus HOM05D001089 ORTHO05D000920 5.1e-25 119.0 200 42.0
Potri.007G109300 Populus trichocarpa HOM05D001089 ORTHO05D000920 5.1e-25 119.0 187 41.2
Oeu047693.2 Olea europaea HOM05D001089 ORTHO05D000920 3.3e-24 116.3 186 45.2
Aqoxy6G00353 Aquilegia oxysepala HOM05D001089 ORTHO05D000920 4.3e-24 115.9 205 39.0
Ciclev10000740m.g Citrus clementina HOM05D001089 ORTHO05D000920 4.3e-24 115.9 224 42.0
Lalb_Chr12g0203151 Lupinus albus HOM05D001089 ORTHO05D000920 1.2e-23 114.4 204 41.2
Lalb_Chr13g0296591 Lupinus albus HOM05D001089 ORTHO05D000920 1.6e-23 114.0 172 44.8
Glyma.04G213200 Glycine max HOM05D001089 ORTHO05D000920 2.1e-23 113.6 195 40.5
PSO541G3549 Papaver somniferum HOM05D001089 ORTHO05D000920 2.1e-23 113.6 165 44.2
SGA_v2.0_scaffold370G50128 Striga asiatica HOM05D001089 ORTHO05D000920 3.6e-23 112.8 216 39.8
Oeu037815.1 Olea europaea HOM05D001089 ORTHO05D000920 8.1e-23 111.7 167 46.1
Carub.0003s2818 Capsella rubella HOM05D001089 ORTHO05D000920 1.1e-22 111.3 194 42.8
COL.COLO4_35730 Corchorus olitorius HOM05D001089 ORTHO05D000920 1.1e-22 111.3 206 42.2
Phvul.009G150200 Phaseolus vulgaris HOM05D001089 ORTHO05D000920 1.4e-22 110.9 196 41.3
Gohir.A05G385500 Gossypium hirsutum HOM05D001089 ORTHO05D000920 1.8e-22 110.5 229 41.9
Ah.06g190850 Amaranthus hybridus HOM05D001089 ORTHO05D000920 2.4e-22 110.2 202 43.6
PSO675G2547 Papaver somniferum HOM05D001089 ORTHO05D000920 2.4e-22 110.2 161 44.7
Gohir.D04G022700 Gossypium hirsutum HOM05D001089 ORTHO05D000920 3.1e-22 109.8 229 41.9
VMungo1309G0318 Vigna mungo HOM05D001089 ORTHO05D000920 6.8e-22 108.6 196 40.8
MSTRG.23450 Avicennia marina HOM05D001089 ORTHO05D000920 1.2e-21 107.8 95 60.0
Thhalv10022633m.g Eutrema salsugineum HOM05D001089 ORTHO05D000920 1.2e-21 107.8 198 40.9
BcaB03g16217 Brassica carinata HOM05D001089 ORTHO05D000920 2.0e-21 107.1 198 40.9
Gorai.012G034300 Gossypium raimondii HOM05D001089 ORTHO05D000920 4.4e-21 105.9 229 41.5
Glyma.05G191400 Glycine max HOM05D001089 ORTHO05D000920 1.7e-20 104.0 199 40.7
Phvul.002G271800 Phaseolus vulgaris HOM05D001089 ORTHO05D000920 1.7e-20 104.0 210 39.5
VMungo0251G1012 Vigna mungo HOM05D001089 ORTHO05D000920 4.9e-20 102.4 196 40.8
AL3G45550 Arabidopsis lyrata HOM05D001089 ORTHO05D000920 8.4e-20 101.7 214 39.7
AT2G13690 Arabidopsis thaliana HOM05D001089 ORTHO05D000920 8.4e-20 101.7 214 40.2
Aa31LG8G12340 Aethionema arabicum HOM05D001089 ORTHO05D000920 1.9e-19 100.5 206 38.8
FAN28G1888 Fragaria x ananassa HOM05D001089 ORTHO05D000920 2.4e-19 100.1 199 42.7
Glyma.06G153000 Glycine max HOM05D001089 ORTHO05D000920 2.4e-19 100.1 189 41.3
CDE08G0610 Ceratophyllum demersum HOM05D001089 ORTHO05D000920 5.4e-19 99.0 200 38.0
THA.LOC104807158 Tarenaya hassleriana HOM05D001089 ORTHO05D000920 5.4e-19 99.0 215 39.1
SGA_v2.0_scaffold289G47265 Striga asiatica HOM05D001089 ORTHO05D000920 1.2e-18 97.8 109 48.6
CARHR104740 Cardamine hirsuta HOM05D001089 ORTHO05D000920 2.1e-18 97.1 209 40.2
Sp3g27080 Schrenkiella parvula HOM05D001089 ORTHO05D000920 2.1e-18 97.1 197 39.1
Sopen04g023170 Solanum pennellii HOM05D002118 ORTHO05D002356 2.3e-17 93.6 95 52.6
C07p09160 Brassica napus HOM05D001089 ORTHO05D000920 2.5e-16 90.1 204 34.3
BolC7t41328H Brassica oleracea HOM05D001089 ORTHO05D000920 2.5e-16 90.1 204 34.3
unitig_736.g22682 Utricularia gibba HOM05D001089 ORTHO05D000920 3.6e-15 86.3 213 34.7
unitig_899.g14693 Utricularia gibba HOM05D001089 ORTHO05D000920 1.2e-13 81.3 206 35.4
Zm00001eb304710 Zea mays HOM05D001089 ORTHO05D000920 1.1e-11 74.7 211 33.2
Os04g0278000 Oryza sativa ssp. japonica HOM05D001089 ORTHO05D000920 5.4e-11 72.4 188 30.3
HPP92_009284 Vanilla planifolia HOM05D001089 ORTHO05D000920 5.1e-09 65.9 189 31.7
Os07g0259700 Oryza sativa ssp. japonica HOM05D001089 ORTHO05D000920 8.7e-09 65.1 200 36.0
Zm00001eb097130 Zea mays HOM05D001089 ORTHO05D000920 2.5e-08 63.5 219 32.4
Zm00001eb211020 Zea mays HOM05D001089 ORTHO05D000920 2.5e-08 63.5 181 30.9
BcaC06g35996 Brassica carinata HOM05D001089 ORTHO05D000920 8.1e-07 58.5 97 36.1
ATR1136G097 Amborella trichopoda HOM05D001089 ORTHO05D000920 1.4e-06 57.8 95 31.6


User provided reference genes

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