Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000978 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 4.4e-195 684.5 354 100.0
Actinidia24483 Actinidia chinensis HOM05D004023 ORTHO05D004681 4.5e-67 259.2 281 53.7
Rhsim13G0202100 Rhododendron simsii HOM05D004023 ORTHO05D004681 1.0e-58 231.5 283 50.5
TAR369G0443 Trochodendron aralioides HOM05D004023 ORTHO05D004681 5.0e-58 229.2 287 51.6
Nitab4.5_0001925g0260 Nicotiana tabacum HOM05D004023 ORTHO05D004681 1.6e-56 224.2 283 48.1
MSTRG.18474 Avicennia marina HOM05D004023 ORTHO05D004681 2.8e-56 223.4 283 50.2
vmacro04098 Vaccinium macrocarpon HOM05D004023 ORTHO05D004681 2.0e-54 217.2 251 51.4
Sopen12g034560 Solanum pennellii HOM05D004023 ORTHO05D004681 2.2e-53 213.8 314 43.6
Solyc12g099940.2 Solanum lycopersicum HOM05D004023 ORTHO05D004681 3.7e-53 213.0 314 43.3
Lj2C946G11 Lonicera japonica HOM05D004023 ORTHO05D004681 2.4e-52 210.3 220 57.3
Migut.D00690 Erythranthe guttata HOM05D004023 ORTHO05D004681 4.1e-52 209.5 276 48.6
PGSC0003DMG400004653 Solanum tuberosum HOM05D004023 ORTHO05D004681 7.0e-52 208.8 314 42.4
CAN.G484.8 Capsicum annuum HOM05D004023 ORTHO05D004681 2.7e-51 206.8 314 41.7
DCAR_006328 Daucus carota HOM05D004023 ORTHO05D004681 2.7e-51 206.8 239 53.1
Cc01_g06740 Coffea canephora HOM05D004023 ORTHO05D004681 4.5e-51 206.1 289 45.3
Lj2C939G1 Lonicera japonica HOM05D004023 ORTHO05D004681 5.9e-51 205.7 332 43.1
Aqoxy1G00042 Aquilegia oxysepala HOM05D004023 ORTHO05D004681 2.9e-50 203.4 286 46.2
Lsat_1_v5_gn_2_38101 Lactuca sativa HOM05D004023 ORTHO05D004681 3.8e-50 203.0 260 47.7
AUR62003487 Chenopodium quinoa HOM05D004023 ORTHO05D004681 3.6e-48 196.4 250 47.2
Peaxi162Scf00062g00920 Petunia axillaris HOM05D004023 ORTHO05D004681 4.7e-48 196.1 351 38.7
PGR119G0815 Punica granatum HOM05D004023 ORTHO05D004681 4.7e-48 196.1 271 46.1
Actinidia07003 Actinidia chinensis HOM05D004023 ORTHO05D004681 6.1e-48 195.7 260 48.5
AUR62017796 Chenopodium quinoa HOM05D004023 ORTHO05D004681 8.9e-47 191.8 250 46.0
MBI13_g41748_MAGBIO Magnolia biondii HOM05D004023 ORTHO05D004681 4.4e-46 189.5 285 42.5
Nitab4.5_0011805g0030 Nicotiana tabacum HOM05D004023 ORTHO05D004681 1.7e-45 187.6 249 45.0
GSVIVG01037415001 Vitis vinifera HOM05D004023 ORTHO05D004681 1.7e-45 187.6 232 49.1
Eucgr.J00649 Eucalyptus grandis HOM05D004023 ORTHO05D004681 2.2e-45 187.2 268 45.9
PSO384G4677 Papaver somniferum HOM05D004023 ORTHO05D004681 2.9e-45 186.8 288 44.4
PSO339G3635 Papaver somniferum HOM05D004023 ORTHO05D004681 8.3e-45 185.3 289 43.3
SGA_v2.0_scaffold29G12111 Striga asiatica HOM05D004023 ORTHO05D004681 2.0e-43 180.6 359 37.9
Ah.03g147260 Amaranthus hybridus HOM05D004023 ORTHO05D004681 3.5e-43 179.9 274 43.8
Hma1.2p1_1711F.1_g298750 Hydrangea macrophylla HOM05D004023 ORTHO05D004681 3.5e-43 179.9 236 48.7
HanXRQChr14g0431991 Helianthus annuus HOM05D004023 ORTHO05D004681 3.0e-42 176.8 271 41.0
Nn7g37124 Nelumbo nucifera HOM05D004023 ORTHO05D004681 2.8e-40 170.2 217 49.3
Hund12723 Selenicereus undatus HOM05D004023 ORTHO05D004681 1.4e-39 167.9 234 44.0
EL10Ac6g15385 Beta vulgaris HOM05D004023 ORTHO05D004681 1.3e-37 161.4 304 39.1
ATR1096G005 Amborella trichopoda HOM05D004023 ORTHO05D004681 2.7e-35 153.7 231 41.6
SalBow6G6388 Salvia bowleyana HOM05D004023 ORTHO05D004681 8.3e-29 132.1 167 44.3
SEGI_14760 Sequoiadendron giganteum HOM05D004023 ORTHO05D004681 4.1e-28 129.8 283 36.4
CDE05G3056 Ceratophyllum demersum HOM05D004023 ORTHO05D004681 4.6e-27 126.3 238 36.1
CANSAT56G0673 Cannabis sativa HOM05D004023 ORTHO05D004681 7.3e-25 119.0 205 39.5
Haze_26009 Corylus avellana HOM05D004023 ORTHO05D004681 2.8e-24 117.1 200 39.5
CiPaw.03G206900 Carya illinoinensis HOM05D004023 ORTHO05D004681 6.2e-24 115.9 203 37.9
Cfa002993 Carpinus fangiana HOM05D004023 ORTHO05D004681 1.1e-23 115.2 200 39.0
Thecc.09G077600 Theobroma cacao HOM05D004023 ORTHO05D004681 2.4e-23 114.0 199 38.7
Glyma.15G177500 Glycine max HOM05D004023 ORTHO05D004681 3.1e-23 113.6 237 34.6
Lalb_Chr08g0232581 Lupinus albus HOM05D004023 ORTHO05D004681 5.2e-23 112.8 233 34.8
MD02G1091000 Malus domestica HOM05D004023 ORTHO05D004681 5.2e-23 112.8 199 38.7
Ca_23416_v3 Cicer arietinum L. HOM05D004023 ORTHO05D004681 6.8e-23 112.5 203 38.4
arahy.Tifrunner.gnm1.ann1.KDYD97 Arachis hypogaea HOM05D004023 ORTHO05D004681 8.9e-23 112.1 223 35.9
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 8.9e-23 112.1 206 35.4
Lj6g0013866 Lotus japonicus HOM05D004023 ORTHO05D004681 1.2e-22 111.7 208 36.5
Aa31sc133G50 Aethionema arabicum HOM05D004023 ORTHO05D004681 1.5e-22 111.3 203 37.9
TPR.G28584 Trifolium pratense HOM05D004023 ORTHO05D004681 2.0e-22 110.9 224 37.1
ATR0598G151 Amborella trichopoda HOM05D004023 ORTHO05D004681 2.6e-22 110.5 193 36.8
Aqoxy7G01044 Aquilegia oxysepala HOM05D004023 ORTHO05D004681 2.6e-22 110.5 205 36.6
AT2G06025 Arabidopsis thaliana HOM05D004023 ORTHO05D004681 2.6e-22 110.5 197 38.1
Carub.0003s2716 Capsella rubella HOM05D004023 ORTHO05D004681 2.6e-22 110.5 248 35.1
Glyma.09G069500 Glycine max HOM05D004023 ORTHO05D004681 2.6e-22 110.5 203 36.5
Gohir.A06G076200 Gossypium hirsutum HOM05D004023 ORTHO05D004681 2.6e-22 110.5 198 35.9
Gorai.010G088100 Gossypium raimondii HOM05D004023 ORTHO05D004681 2.6e-22 110.5 198 35.9
AL3G43670 Arabidopsis lyrata HOM05D004023 ORTHO05D004681 4.4e-22 109.8 244 34.0
MD15G1217100 Malus domestica HOM05D004023 ORTHO05D004681 4.4e-22 109.8 199 38.7
VMungo1309G2832 Vigna mungo HOM05D004023 ORTHO05D004681 7.6e-22 109.0 203 36.9
arahy.Tifrunner.gnm1.ann1.XHC94G Arachis hypogaea HOM05D004023 ORTHO05D004681 9.9e-22 108.6 223 33.2
Phvul.009G227400 Phaseolus vulgaris HOM05D004023 ORTHO05D004681 1.3e-21 108.2 203 36.9
THA.LOC104826588 Tarenaya hassleriana HOM05D004023 ORTHO05D004681 1.3e-21 108.2 199 37.7
Atru.chr7.1700 Acer truncatum HOM05D004023 ORTHO05D004681 1.7e-21 107.8 219 37.0
Ciclev10009135m.g Citrus clementina HOM05D004023 ORTHO05D004681 1.7e-21 107.8 191 37.7
unitig_60.g25636 Utricularia gibba HOM05D004023 ORTHO05D004681 1.7e-21 107.8 234 35.0
arahy.Tifrunner.gnm1.ann1.KW18SN Arachis hypogaea HOM05D004023 ORTHO05D004681 2.2e-21 107.5 204 37.3
Hund08779 Selenicereus undatus HOM05D004023 ORTHO05D004681 2.2e-21 107.5 217 36.4
CSS0019806 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 2.9e-21 107.1 219 35.2
CSS0007502 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 3.8e-21 106.7 236 33.1
TWI34G0375 Tripterygium wilfordii HOM05D004023 ORTHO05D004681 6.4e-21 105.9 255 33.3
CSS0006992 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 8.4e-21 105.5 208 34.6
Psat1g134240 Pisum sativum HOM05D004023 ORTHO05D004681 8.4e-21 105.5 203 35.0
Prupe.7G199400 Prunus persica HOM05D004023 ORTHO05D004681 8.4e-21 105.5 202 36.6
unitig_0.g313 Utricularia gibba HOM05D004023 ORTHO05D004681 8.4e-21 105.5 168 41.1
HPP92_013291 Vanilla planifolia HOM05D004023 ORTHO05D004681 8.4e-21 105.5 186 39.2
CSS0047726 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 1.1e-20 105.1 224 34.8
Dinv42390 Davidia involucrata HOM05D004023 ORTHO05D004681 1.1e-20 105.1 193 38.9
Sp3g24610 Schrenkiella parvula HOM05D004023 ORTHO05D004681 1.1e-20 105.1 199 38.2
TAR383G0448 Trochodendron aralioides HOM05D004023 ORTHO05D004681 1.1e-20 105.1 202 37.1
BcaB06g26883 Brassica carinata HOM05D004023 ORTHO05D004681 1.4e-20 104.8 245 34.3
Potri.006G142100 Populus trichocarpa HOM05D004023 ORTHO05D004681 3.2e-20 103.6 205 38.0
Sabra06G0111200 Salix brachista HOM05D004023 ORTHO05D004681 3.2e-20 103.6 229 34.1
QL11p000695 Quercus lobata HOM05D004023 ORTHO05D004681 4.2e-20 103.2 197 38.1
BcaC06g35952 Brassica carinata HOM05D004023 ORTHO05D004681 5.4e-20 102.8 200 37.0
Thhalv10002632m.g Eutrema salsugineum HOM05D004023 ORTHO05D004681 5.4e-20 102.8 237 32.9
Actinidia29930 Actinidia chinensis HOM05D004023 ORTHO05D004681 1.2e-19 101.7 190 38.9
A07p06280 Brassica napus HOM05D004023 ORTHO05D004681 1.2e-19 101.7 197 37.1
BraA07t28423Z Brassica rapa HOM05D004023 ORTHO05D004681 1.2e-19 101.7 197 37.1
CARHR103710 Cardamine hirsuta HOM05D004023 ORTHO05D004681 1.2e-19 101.7 242 33.1
Lsat_1_v5_gn_7_35101 Lactuca sativa HOM05D004023 ORTHO05D004681 1.6e-19 101.3 191 38.7
MBI13_g42818_MAGBIO Magnolia biondii HOM05D004023 ORTHO05D004681 1.6e-19 101.3 208 32.2
Medtr2g041620 Medicago truncatula HOM05D004023 ORTHO05D004681 2.1e-19 100.9 225 34.7
Glyma.13G110200 Glycine max HOM05D004023 ORTHO05D004681 2.7e-19 100.5 187 34.8
C07p09330 Brassica napus HOM05D004023 ORTHO05D004681 3.5e-19 100.1 245 33.9
BolC7t41351H Brassica oleracea HOM05D004023 ORTHO05D004681 3.5e-19 100.1 245 33.9
CSS0012197 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 4.6e-19 99.8 191 35.6
TWI63G1612 Tripterygium wilfordii HOM05D004023 ORTHO05D004681 4.6e-19 99.8 216 35.2
ClCG03G015110 Citrullus lanatus HOM05D004023 ORTHO05D004681 6.0e-19 99.4 206 34.0
Os03g0177000 Oryza sativa ssp. japonica HOM05D004023 ORTHO05D004681 3.0e-18 97.1 189 36.5
PGR142G0045 Punica granatum HOM05D004023 ORTHO05D004681 3.9e-18 96.7 203 35.5
Cc06_g12120 Coffea canephora HOM05D004023 ORTHO05D004681 6.6e-18 95.9 193 35.8
HanXRQChr09g0237831 Helianthus annuus HOM05D004023 ORTHO05D004681 8.7e-18 95.5 198 36.9
Zm00001eb401920 Zea mays HOM05D004023 ORTHO05D004681 1.1e-17 95.1 192 37.5
Zm00001eb401960 Zea mays HOM05D004023 ORTHO05D004681 1.1e-17 95.1 192 37.5
Lj4A912T25 Lonicera japonica HOM05D004023 ORTHO05D004681 1.9e-17 94.4 172 40.7
Nitab4.5_0005767g0010 Nicotiana tabacum HOM05D004023 ORTHO05D004681 1.9e-17 94.4 197 33.0
FAN23G1893 Fragaria x ananassa HOM05D004023 ORTHO05D004681 2.5e-17 94.0 275 30.5
Sed0007208 Sechium edule HOM05D004023 ORTHO05D004681 3.3e-17 93.6 204 33.3
ECA240G3187 Erigeron canadensis HOM05D004023 ORTHO05D004681 5.6e-17 92.8 196 34.7
Eucgr.C00816 Eucalyptus grandis HOM05D004023 ORTHO05D004681 5.6e-17 92.8 203 30.0
PGSC0003DMG400027761 Solanum tuberosum HOM05D004023 ORTHO05D004681 1.2e-16 91.7 197 33.5
FAN28G2268 Fragaria x ananassa HOM05D004023 ORTHO05D004681 1.6e-16 91.3 275 30.2
CDE05G0867 Ceratophyllum demersum HOM05D004023 ORTHO05D004681 2.1e-16 90.9 150 40.0
AUR62025247 Chenopodium quinoa HOM05D004023 ORTHO05D004681 2.8e-16 90.5 187 36.4
FvH4_1g08620 Fragaria vesca HOM05D004023 ORTHO05D004681 2.8e-16 90.5 250 30.4
FAN26G1792 Fragaria x ananassa HOM05D004023 ORTHO05D004681 2.8e-16 90.5 217 31.8
Nitab4.5_0000024g0190 Nicotiana tabacum HOM05D004023 ORTHO05D004681 2.8e-16 90.5 224 31.2
Glyma.17G049500 Glycine max HOM05D004023 ORTHO05D004681 3.6e-16 90.1 187 32.6
FAN19G1115 Fragaria x ananassa HOM05D004023 ORTHO05D004681 6.2e-16 89.4 217 31.8
RcHm_v2.0_Chr2g0094881 Rosa chinensis HOM05D004023 ORTHO05D004681 6.2e-16 89.4 215 32.1
Peaxi162Scf00554g00920 Petunia axillaris HOM05D004023 ORTHO05D004681 8.1e-16 89.0 194 33.5
AUR62028938 Chenopodium quinoa HOM05D004023 ORTHO05D004681 1.1e-15 88.6 187 35.3
CsaV3_1G041000 Cucumis sativus L. HOM05D004023 ORTHO05D004681 1.1e-15 88.6 183 33.9
DCAR_031922 Daucus carota HOM05D004023 ORTHO05D004681 1.1e-15 88.6 258 31.0
DCAR_024747 Daucus carota HOM05D004023 ORTHO05D004681 1.4e-15 88.2 197 34.5
FAN26G3281 Fragaria x ananassa HOM05D004023 ORTHO05D004681 4.0e-15 86.7 217 31.3
Gohir.D13G196385 Gossypium hirsutum HOM05D004023 ORTHO05D004681 5.3e-15 86.3 219 33.3
Gorai.013G224500 Gossypium raimondii HOM05D004023 ORTHO05D004681 5.3e-15 86.3 219 33.3
Phvul.003G131100 Phaseolus vulgaris HOM05D004023 ORTHO05D004681 5.3e-15 86.3 210 33.3
Gohir.D06G075200 Gossypium hirsutum HOM05D004023 ORTHO05D004681 6.9e-15 85.9 178 32.0
Gohir.A13G191000 Gossypium hirsutum HOM05D004023 ORTHO05D004681 2.0e-14 84.3 219 32.9
Cpa.g.sc28.45 Carica papaya HOM05D004023 ORTHO05D004681 4.4e-14 83.2 113 46.9
EL10Ac8g19063 Beta vulgaris HOM05D004023 ORTHO05D004681 2.4e-12 77.4 130 38.5
Nn8g38657 Nelumbo nucifera HOM05D004023 ORTHO05D004681 2.4e-12 77.4 152 38.2
Sc18g0002510 Simmondsia chinensis HOM05D004023 ORTHO05D004681 2.4e-12 77.4 207 30.4
Duzib168G1033 Durio zibethinus HOM05D004023 ORTHO05D004681 3.2e-12 77.0 172 32.6
vmacro06339 Vaccinium macrocarpon HOM05D004023 ORTHO05D004681 1.6e-11 74.7 181 34.3
Rhsim03G0227800 Rhododendron simsii HOM05D004023 ORTHO05D004681 6.6e-10 69.3 170 32.4
Manes.03G040200 Manihot esculenta HOM05D004023 ORTHO05D004681 8.7e-10 68.9 176 34.1
Mapoly0023s0080 Marchantia polymorpha HOM05D004023 ORTHO05D004681 4.3e-09 66.6 256 27.7
Oeu020552.2 Olea europaea HOM05D004023 ORTHO05D004681 5.6e-09 66.2 104 41.3
Solyc05g025890.3 Solanum lycopersicum HOM05D004023 ORTHO05D004681 1.6e-08 64.7 214 28.5
MELO3C015518.2 Cucumis melo HOM05D004023 ORTHO05D004681 4.8e-08 63.2 157 31.2
CSS0040778 Camellia sinensis var. sinensis HOM05D017684 ORTHO05D109899 1.4e-07 61.6 69 55.1
CSS0041518 Camellia sinensis var. sinensis HOM05D017684 ORTHO05D109142 1.4e-07 61.6 54 64.8
Sopen05g021320 Solanum pennellii HOM05D004023 ORTHO05D004681 3.1e-07 60.5 214 27.6
CSS0000593 Camellia sinensis var. sinensis HOM05D017684 ORTHO05D112352 4.0e-07 60.1 52 65.4
arahy.Tifrunner.gnm1.ann1.NU1P8G Arachis hypogaea HOM05D004023 ORTHO05D004681 5.3e-07 59.7 171 31.0
Sed0008804 Sechium edule HOM05D004023 ORTHO05D004681 5.3e-07 59.7 193 29.0
CSS0041271 Camellia sinensis var. sinensis HOM05D005315 ORTHO05D006589 9.0e-07 58.9 83 51.8
CSS0040624 Camellia sinensis var. sinensis HOM05D017684 ORTHO05D110270 1.5e-06 58.2 54 61.1
Migut.L01563 Erythranthe guttata HOM05D004023 ORTHO05D004681 1.5e-06 58.2 102 39.2
CSS0017761 Camellia sinensis var. sinensis HOM05D005315 ORTHO05D006589 2.6e-06 57.4 83 50.6
PSO339G4574 Papaver somniferum HOM05D004023 ORTHO05D004681 3.4e-06 57.0 179 29.6
AagrBONN_evm.TU.Sc2ySwM_117.2238 Anthoceros agrestis HOM05D004023 ORTHO05D004681 7.6e-06 55.8 152 28.9


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