Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 5.7e-66 254.2 138 100.0
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.4e-24 116.7 99 60.6
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 3.2e-24 115.5 120 54.2
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 4.1e-24 115.2 107 53.3
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 1.2e-23 113.6 105 59.0
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 3.3e-21 105.5 99 55.6
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 7.3e-21 104.4 93 58.1
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.8e-19 99.8 91 56.0
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 7.0e-16 87.8 104 44.2
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-15 86.7 114 45.6
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 7.8e-15 84.3 106 41.5
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 1.0e-14 84.0 98 43.9
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 1.0e-14 84.0 104 45.2
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 5.0e-14 81.6 100 43.0
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 6.6e-14 81.3 100 45.0
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 6.6e-14 81.3 100 45.0
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 3.3e-13 79.0 101 43.6
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 4.3e-13 78.6 100 43.0
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 4.3e-13 78.6 97 44.3
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-12 77.0 128 39.1
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-12 77.0 127 36.2
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-12 76.6 106 43.4
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 2.8e-12 75.9 106 39.6
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 8.1e-12 74.3 103 35.9
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 8.1e-12 74.3 104 40.4
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 1.4e-11 73.6 101 42.6
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 1.8e-11 73.2 103 41.7
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.3e-11 72.8 124 33.9
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 2.3e-11 72.8 137 38.0
Haze_02030 Corylus avellana HOM05D007277 ORTHO05D006336 3.1e-11 72.4 91 44.0
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 4.0e-11 72.0 103 37.9
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 5.2e-11 71.6 134 31.3
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 5.2e-11 71.6 98 42.9
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 8.9e-11 70.9 103 40.8
TAR636G1532 Trochodendron aralioides HOM05D012741 ORTHO05D006336 8.9e-11 70.9 107 35.5
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 1.2e-10 70.5 113 36.3
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 1.5e-10 70.1 101 39.6
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 1.5e-10 70.1 127 34.6
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 1.5e-10 70.1 109 37.6
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 3.4e-10 68.9 106 34.0
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 4.4e-10 68.6 114 35.1
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 5.8e-10 68.2 101 40.6
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 7.5e-10 67.8 102 33.3
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.3e-09 67.0 119 35.3
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 1.3e-09 67.0 105 41.0
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 1.7e-09 66.6 108 33.3
Potri.017G018901 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.7e-09 66.6 103 35.0
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.7e-09 66.6 108 33.3
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 2.2e-09 66.2 111 33.3
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.2e-09 66.2 131 32.8
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.2e-09 66.2 112 33.0
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 2.9e-09 65.9 103 39.8
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 3.7e-09 65.5 104 36.5
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 4.9e-09 65.1 89 40.4
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.3e-09 64.3 104 36.5
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.1e-08 63.9 112 31.2
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 2.4e-08 62.8 104 35.6
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 2.4e-08 62.8 108 32.4
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 5.4e-08 61.6 104 34.6
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.4e-08 61.6 104 35.6
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 5.4e-08 61.6 109 32.1
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 5.4e-08 61.6 104 37.5
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 7.1e-08 61.2 104 34.6
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 7.1e-08 61.2 104 34.6
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 7.1e-08 61.2 108 31.5
TAR636G1074 Trochodendron aralioides HOM05D012741 ORTHO05D006336 9.2e-08 60.8 108 33.3
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 1.2e-07 60.5 99 32.3
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 1.6e-07 60.1 76 38.2
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.6e-07 60.1 104 31.7
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 2.1e-07 59.7 103 38.8
TAR636G3203 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.7e-07 59.3 108 31.5
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 3.5e-07 58.9 143 35.0
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.5e-07 58.9 126 31.7
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 4.6e-07 58.5 89 37.1
FAN08G2286 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.6e-07 58.5 77 37.7
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 4.6e-07 58.5 105 32.4
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 7.8e-07 57.8 103 34.0
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.0e-06 57.4 98 35.7
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 1.0e-06 57.4 101 31.7
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 1.3e-06 57.0 105 34.3
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 1.7e-06 56.6 135 32.6
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 1.7e-06 56.6 107 30.8
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 1.7e-06 56.6 103 32.0
TAR636G0488 Trochodendron aralioides HOM05D000568 ORTHO05D000628 2.3e-06 56.2 106 33.0
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 3.9e-06 55.5 105 32.4


User provided reference genes

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