Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 0.0e+00 1243.4 610 100.0
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 0.0e+00 1151.3 635 90.9
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 5.1e-276 954.1 629 76.5
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 3.7e-266 921.4 644 72.7
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 4.6e-261 904.4 681 68.7
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 1.3e-252 876.3 634 68.0
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 1.4e-249 866.3 636 67.5
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 2.4e-249 865.5 621 68.6
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 3.1e-249 865.1 636 67.6
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 2.6e-248 862.1 636 67.1
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 4.5e-248 861.3 636 67.0
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 5.9e-248 860.9 632 67.6
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 3.8e-247 858.2 637 67.7
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 5.0e-247 857.8 629 68.2
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 8.5e-247 857.1 635 67.4
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 3.2e-246 855.1 631 66.7
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 4.2e-246 854.7 635 66.3
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 5.5e-246 854.4 636 65.7
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 5.5e-246 854.4 634 67.7
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 1.2e-245 853.2 628 67.0
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 1.2e-245 853.2 634 67.5
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 2.1e-245 852.4 633 66.2
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 7.9e-245 850.5 632 66.0
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 5.1e-244 847.8 634 65.8
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 8.8e-244 847.0 663 64.4
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.0e-243 845.9 674 63.6
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 2.0e-243 845.9 636 64.8
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 2.0e-243 845.9 635 64.9
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 2.5e-243 845.5 633 68.4
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 2.5e-243 845.5 656 64.9
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 1.3e-242 843.2 633 66.7
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 6.3e-242 840.9 634 66.4
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 1.1e-241 840.1 636 67.3
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 2.4e-241 839.0 635 65.4
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 3.1e-241 838.6 617 66.8
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 9.1e-241 837.0 656 64.8
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 1.2e-240 836.6 633 66.2
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 2.6e-240 835.5 638 64.9
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 7.7e-240 833.9 656 64.6
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 1.0e-239 833.6 627 65.6
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 2.5e-238 828.9 626 65.5
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 2.5e-238 828.9 659 64.3
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 5.5e-238 827.8 620 65.0
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 2.7e-237 825.5 635 65.2
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 1.5e-235 819.7 630 64.8
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 2.0e-235 819.3 638 62.5
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 2.2e-234 815.8 636 64.6
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 3.7e-234 815.1 639 65.1
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 4.8e-234 814.7 635 66.1
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 1.1e-233 813.5 651 62.4
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 1.5e-232 809.7 598 66.6
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 3.5e-232 808.5 633 64.8
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 7.7e-232 807.4 646 64.1
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 1.0e-231 807.0 637 64.2
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 1.1e-230 803.5 632 65.3
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 1.1e-230 803.5 642 64.0
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 1.1e-230 803.5 642 64.0
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 1.9e-230 802.7 632 65.2
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 4.7e-229 798.1 623 62.1
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 3.0e-228 795.4 638 62.9
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 4.4e-227 791.6 637 62.2
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 1.3e-226 790.0 637 61.9
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 2.2e-226 789.3 640 61.6
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 4.8e-226 788.1 636 62.6
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 1.1e-225 786.9 631 61.6
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 1.1e-225 786.9 628 62.7
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 2.0e-224 782.7 631 62.1
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 2.6e-224 782.3 630 62.5
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 5.9e-224 781.2 624 62.8
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 7.7e-224 780.8 643 60.8
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 1.7e-223 779.6 638 62.1
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 1.7e-223 779.6 625 62.7
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 1.5e-222 776.5 625 62.9
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 2.5e-222 775.8 639 60.9
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 4.2e-222 775.0 630 61.6
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 4.2e-222 775.0 651 61.0
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 2.7e-221 772.3 645 61.4
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 3.6e-221 771.9 534 71.7
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 8.0e-221 770.8 626 62.3
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 1.8e-220 769.6 626 61.3
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 1.4e-217 760.0 634 62.5
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 2.9e-215 752.3 636 59.4
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 2.1e-213 746.1 576 63.0
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 1.8e-212 743.0 610 60.7
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 4.5e-208 728.4 638 58.5
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 1.7e-207 726.5 471 75.2
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 5.4e-201 704.9 612 57.0
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 5.2e-196 688.3 578 60.4
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 8.9e-188 661.0 624 55.1
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 1.7e-186 656.8 445 71.5
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 6.6e-175 618.2 613 52.9
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 3.6e-173 612.5 603 53.2
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 1.3e-170 604.0 607 51.6
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 1.5e-163 580.5 496 59.5
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 4.8e-157 558.9 419 64.4
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 3.9e-151 539.3 593 48.6
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 3.4e-139 499.6 349 68.2
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 1.6e-133 480.7 454 51.8
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 1.6e-128 464.2 325 69.8
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 4.1e-124 449.5 329 66.9
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 1.8e-100 370.9 406 48.8
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 3.5e-75 287.0 249 56.6
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 1.1e-71 275.4 189 64.0
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 2.8e-64 250.8 192 67.7
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 9.6e-57 225.7 190 57.9
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 1.4e-52 211.8 185 58.9
Ca_23662_v3 Cicer arietinum L. HOM05D006991 ORTHO05D028457 1.7e-50 204.9 154 65.6
AUR62033321 Chenopodium quinoa HOM05D006991 ORTHO05D028457 2.3e-50 204.5 128 74.2
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 3.4e-46 190.7 133 67.7
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 9.3e-44 182.6 127 70.9
PSO782G3099 Papaver somniferum HOM05D006991 ORTHO05D028457 1.1e-36 159.1 170 50.6
CAN.G1527.6 Capsicum annuum HOM05D006991 ORTHO05D028457 3.9e-34 150.6 106 67.0
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 3.1e-31 141.0 102 69.6
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 7.4e-25 119.8 57 93.0
AUR62036784 Chenopodium quinoa HOM05D006991 ORTHO05D138340 3.7e-24 117.5 77 68.8
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 1.9e-20 105.1 65 73.8


User provided reference genes

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