Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 1.1e-162 576.6 294 100.0
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 6.1e-118 427.9 254 85.0
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 3.2e-111 405.6 254 80.7
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 8.0e-110 401.0 233 85.8
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 1.4e-109 400.2 309 70.6
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 1.8e-109 399.8 269 77.7
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 2.3e-109 399.4 265 80.0
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 5.7e-108 394.8 310 69.7
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 9.8e-108 394.0 254 78.7
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 1.7e-107 393.3 256 78.5
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 3.7e-107 392.1 254 78.0
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 4.1e-106 388.7 253 77.9
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 5.9e-105 384.8 253 78.3
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 7.7e-105 384.4 256 76.2
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.0e-104 384.0 253 77.9
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 1.0e-104 384.0 259 74.5
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 1.7e-104 383.3 257 76.3
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 2.3e-104 382.9 257 76.3
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 2.9e-104 382.5 270 73.3
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 2.9e-104 382.5 239 81.2
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 8.6e-104 380.9 239 80.8
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.1e-103 380.6 253 77.9
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 1.1e-103 380.6 266 74.8
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 4.3e-103 378.6 256 75.4
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 2.8e-102 375.9 253 75.1
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 3.6e-102 375.6 258 74.8
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 6.1e-102 374.8 226 80.5
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 1.2e-100 370.5 254 74.8
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 4.4e-100 368.6 230 78.7
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 7.5e-100 367.9 266 71.8
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 9.8e-100 367.5 230 80.4
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 1.3e-99 367.1 263 75.3
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 1.7e-99 366.7 257 71.6
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 1.7e-99 366.7 258 72.9
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 2.9e-99 365.9 257 75.1
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 2.9e-99 365.9 257 75.1
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 4.9e-99 365.2 287 67.9
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 6.4e-99 364.8 259 74.1
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 8.3e-99 364.4 266 70.3
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 8.3e-99 364.4 265 71.7
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 1.1e-98 364.0 272 71.0
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 3.2e-98 362.5 286 67.5
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 4.1e-98 362.1 266 69.9
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 5.4e-98 361.7 267 72.7
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 5.4e-98 361.7 266 69.9
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 9.2e-98 360.9 269 70.6
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 2.0e-97 359.8 273 69.6
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 3.5e-97 359.0 257 71.6
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 3.5e-97 359.0 231 75.8
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 1.0e-96 357.5 257 70.0
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 1.0e-96 357.5 257 71.2
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 1.0e-96 357.5 266 69.2
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 1.3e-96 357.1 216 81.0
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 1.7e-96 356.7 257 70.4
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 3.0e-96 355.9 257 69.6
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 8.6e-96 354.4 234 75.2
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 8.6e-96 354.4 273 66.7
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 1.1e-95 354.0 202 86.6
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 3.3e-95 352.4 231 75.8
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 3.3e-95 352.4 231 75.8
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 3.6e-94 349.0 266 67.7
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 8.0e-94 347.8 256 68.4
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 8.0e-94 347.8 266 66.5
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 1.0e-93 347.4 239 71.5
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 4.0e-93 345.5 269 66.9
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 1.5e-92 343.6 241 71.4
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 2.0e-92 343.2 239 70.7
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 1.3e-91 340.5 211 77.3
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 3.7e-91 339.0 230 72.2
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 4.9e-91 338.6 240 70.4
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 1.4e-90 337.0 204 81.9
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 1.9e-90 336.7 266 64.7
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 3.2e-90 335.9 201 80.6
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 4.1e-90 335.5 226 72.1
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 1.2e-89 334.0 247 68.4
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 1.7e-88 330.1 265 64.5
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 3.0e-88 329.3 266 64.3
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 3.9e-88 328.9 256 66.0
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 5.0e-88 328.6 189 86.2
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 8.6e-88 327.8 244 68.0
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 7.3e-87 324.7 201 75.1
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 8.1e-86 321.2 257 68.5
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 1.1e-85 320.9 260 66.2
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 3.4e-84 315.8 265 66.4
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 4.6e-81 305.4 235 68.5
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 4.6e-81 305.4 202 72.8
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 1.5e-79 300.4 176 81.2
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 1.4e-77 293.9 239 64.0
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 1.2e-73 280.8 272 59.9
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 2.1e-73 280.0 407 42.8
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 9.6e-71 271.2 201 70.1
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 4.4e-68 262.3 233 56.7
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 9.3e-66 254.6 231 61.5
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 1.6e-65 253.8 204 61.3
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 2.7e-65 253.1 255 51.4
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 3.5e-65 252.7 254 52.0
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 2.8e-62 243.0 184 70.1
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 5.6e-55 218.8 191 61.3
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 8.1e-54 214.9 219 50.7
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 1.0e-48 198.0 177 60.5
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 7.4e-47 191.8 156 66.7
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 1.2e-33 147.9 79 89.9
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.3e-27 127.9 78 74.4
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 2.5e-26 123.6 85 70.6
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 1.4e-24 117.9 73 78.1
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.1e-23 114.8 96 57.3
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 2.0e-20 104.0 58 82.8
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 1.0e-19 101.7 83 71.1
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.4e-16 91.3 56 71.4
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 5.2e-16 89.4 70 65.7
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 2.6e-15 87.0 53 71.7
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 7.0e-13 79.0 91 50.5
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 1.2e-12 78.2 49 77.6
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 2.3e-08 63.9 153 30.1
Gohir.A07G149550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 4.4e-07 59.7 68 52.9
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 5.7e-07 59.3 88 35.2
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 2.8e-06 57.0 76 47.4


User provided reference genes

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