Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000878 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 5.9e-115 417.5 210 100.0
CSS0033607 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.4e-108 396.4 209 96.2
CSS0013170 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.2e-107 393.3 209 95.7
CSS0012449 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 7.5e-102 374.0 210 90.5
CSS0037169 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.4e-100 369.0 209 89.5
CSS0038207 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.2e-91 340.1 209 83.3
CSS0023953 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 3.3e-89 332.0 209 84.7
CSS0046839 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.6e-38 161.4 199 47.7
CSS0040223 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.7e-34 148.3 205 46.8
CSS0041497 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-32 144.1 206 45.6
CSS0026441 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-31 141.0 203 42.9
CSS0022166 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-31 139.4 204 45.6
CSS0046557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-25 120.9 207 39.6
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.7e-25 118.6 183 41.0
CSS0021557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-24 117.5 194 42.3
vmacro23521 Vaccinium macrocarpon HOM05D000157 ORTHO05D016144 1.1e-20 104.4 236 35.6
Dinv13014 Davidia involucrata HOM05D011494 ORTHO05D016144 6.9e-15 85.1 147 36.7
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 1.0e-13 81.3 157 34.4
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.0e-13 81.3 152 40.1
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.0e-13 81.3 168 36.3
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 2.2e-13 80.1 157 37.6
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 3.8e-13 79.3 149 35.6
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-13 79.3 149 35.6
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 3.8e-13 79.3 149 35.6
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 3.8e-13 79.3 149 35.6
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-13 79.0 149 35.6
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 5.0e-13 79.0 157 36.9
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 6.5e-13 78.6 149 35.6
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-13 78.6 191 30.9
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 8.5e-13 78.2 149 34.9
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.1e-12 77.8 154 39.0
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 1.9e-12 77.0 149 32.2
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.5e-12 75.5 157 37.6
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 4.7e-11 72.4 171 32.2
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 1.0e-10 71.2 179 31.8
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 2.3e-10 70.1 70 47.1
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 3.0e-10 69.7 67 49.3
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 3.9e-10 69.3 68 48.5
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 3.9e-10 69.3 68 47.1
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 3.9e-10 69.3 68 47.1
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 5.1e-10 68.9 163 31.3
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.8e-10 68.2 86 46.5
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 1.1e-09 67.8 68 48.5
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 1.5e-09 67.4 68 45.6
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.5e-09 67.4 79 48.1
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 2.0e-09 67.0 143 36.4
TWI09G0132 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.6e-09 66.6 141 31.2
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 3.3e-09 66.2 184 33.2
TWI63G0592 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.3e-09 66.2 141 33.3
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.4e-09 65.9 84 44.0
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 5.7e-09 65.5 73 47.9
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 5.7e-09 65.5 73 47.9
CSS0025827 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.7e-09 65.5 69 47.8
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 5.7e-09 65.5 188 34.6
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 7.4e-09 65.1 70 50.0
PSO013G0379 Papaver somniferum HOM05D000004 ORTHO05D000224 7.4e-09 65.1 68 44.1
CSS0026637 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 9.7e-09 64.7 69 47.8
CSS0014469 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.3e-08 64.3 65 47.7
CSS0014554 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.3e-08 64.3 69 47.8
FvH4_6g27413 Fragaria vesca HOM05D000004 ORTHO05D000224 1.3e-08 64.3 199 29.6
TWI79G1342 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 1.7e-08 63.9 177 29.9
CSS0009469 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D000034 2.8e-08 63.2 54 53.7
PSO170G5394 Papaver somniferum HOM05D000004 ORTHO05D000002 2.8e-08 63.2 63 46.0
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 2.8e-08 63.2 82 39.0
Actinidia34655 Actinidia chinensis HOM05D000004 ORTHO05D000034 3.7e-08 62.8 176 31.2
CSS0033375 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.7e-08 62.8 73 46.6
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.7e-08 62.8 77 45.5
SHI46790 Sapria himalayana HOM05D000004 ORTHO05D000224 3.7e-08 62.8 75 37.3
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 4.8e-08 62.4 73 46.6
CSS0027245 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.2e-08 61.6 73 45.2
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.2e-08 61.6 209 29.2
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 8.2e-08 61.6 212 28.3
TWI31G0044 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-07 60.8 140 32.1
CSS0030164 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.8e-07 60.5 69 43.5
TWI63G1291 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.8e-07 60.5 70 42.9
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 1.8e-07 60.5 153 29.4
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.4e-07 60.1 65 46.2
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-07 60.1 161 31.7
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-07 60.1 159 32.1
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 2.4e-07 60.1 79 40.5
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-07 59.7 184 31.5
FvH4_3g35241 Fragaria vesca HOM05D000004 ORTHO05D000002 4.1e-07 59.3 105 35.2
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 4.1e-07 59.3 160 28.1
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.3e-07 58.9 66 48.5
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.3e-07 58.9 218 28.9
CSS0034226 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.3e-07 58.9 66 48.5
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 5.3e-07 58.9 150 33.3
Thecc.02G145100 Theobroma cacao HOM05D010356 ORTHO05D000034 5.3e-07 58.9 174 27.6
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 7.0e-07 58.5 58 51.7
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.0e-07 58.5 186 30.1
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 7.0e-07 58.5 146 32.2
PSO478G0812 Papaver somniferum HOM05D000004 ORTHO05D000224 7.0e-07 58.5 132 31.1
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.0e-07 58.5 198 27.3
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.1e-07 58.2 210 30.0
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 9.1e-07 58.2 105 35.2
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 1.2e-06 57.8 163 27.0
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 1.2e-06 57.8 163 27.0
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-06 57.8 218 28.4
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-06 57.8 218 28.4
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-06 57.8 186 29.0
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-06 57.8 218 28.4
PSO339G1570 Papaver somniferum HOM05D000004 ORTHO05D000224 1.2e-06 57.8 62 53.2
Rhsim07G0155000 Rhododendron simsii HOM05D011494 ORTHO05D016144 1.2e-06 57.8 58 53.4
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 1.5e-06 57.4 139 30.2
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 1.5e-06 57.4 70 42.9
PSO461G0080 Papaver somniferum HOM05D011494 ORTHO05D003797 1.5e-06 57.4 142 28.2
Thecc.06G081500 Theobroma cacao HOM05D010356 ORTHO05D000034 1.5e-06 57.4 174 27.6
TWI63G1229 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.5e-06 57.4 141 32.6
TWI81G0457 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.5e-06 57.4 141 30.5
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-06 57.0 160 28.8
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-06 57.0 210 28.1
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 2.0e-06 57.0 82 39.0
vmacro21906 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 2.0e-06 57.0 80 37.5
CSS0007342 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.6e-06 56.6 65 43.1
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 2.6e-06 56.6 149 35.6
Ca_04624_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.6e-06 56.6 154 29.2
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.5e-06 56.2 186 29.0
MBI01_g37335_MAGBIO Magnolia biondii HOM05D009540 ORTHO05D000034 3.5e-06 56.2 77 39.0
CSS0001225 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.5e-06 55.8 61 45.9
CSS0033175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.5e-06 55.8 66 45.5
ClCG10G007890 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.5e-06 55.8 229 25.8
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.5e-06 55.8 146 32.2
PSO700G0012 Papaver somniferum HOM05D000004 ORTHO05D000002 4.5e-06 55.8 164 30.5
SHI17174 Sapria himalayana HOM05D000004 ORTHO05D000002 4.5e-06 55.8 87 39.1
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.9e-06 55.5 210 29.0
Ca_04323_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 5.9e-06 55.5 77 37.7
Hma1.2p1_0866F.1_g230150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 5.9e-06 55.5 56 48.2
TWI32G0319 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.9e-06 55.5 83 36.1
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.7e-06 55.1 210 27.6
FvH4_3g28463 Fragaria vesca HOM05D011494 ORTHO05D000034 7.7e-06 55.1 91 38.5


User provided reference genes

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