Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000849 Camellia sinensis var. sinensis HOM05D007501 ORTHO05D009528 2.5e-101 372.1 183 100.0
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 3.3e-61 238.8 185 66.5
vmacro09418 Vaccinium macrocarpon HOM05D007501 ORTHO05D009528 1.4e-59 233.4 214 58.9
RhsimUnG0206300 Rhododendron simsii HOM05D007501 ORTHO05D009528 1.9e-56 223.0 175 65.7
GSVIVG01014087001 Vitis vinifera HOM05D007501 ORTHO05D009528 1.5e-53 213.4 183 60.1
Dinv13355 Davidia involucrata HOM05D007501 ORTHO05D009528 6.2e-52 208.0 183 61.7
Oeu059251.1 Olea europaea HOM05D007501 ORTHO05D009528 2.6e-50 202.6 185 58.9
MD11G1270900 Malus domestica HOM05D007501 ORTHO05D009528 1.3e-49 200.3 183 57.4
RcHm_v2.0_Chr5g0029351 Rosa chinensis HOM05D007501 ORTHO05D009528 2.3e-46 189.5 187 54.0
FAN21G3657 Fragaria x ananassa HOM05D007501 ORTHO05D009528 1.5e-45 186.8 186 52.2
Cc05_g10640 Coffea canephora HOM05D007501 ORTHO05D009528 3.3e-45 185.7 195 55.4
MD03G1250700 Malus domestica HOM05D007501 ORTHO05D009528 2.1e-44 183.0 168 57.1
FAN25G1377 Fragaria x ananassa HOM05D007501 ORTHO05D009528 2.8e-44 182.6 186 51.1
QL08p025249 Quercus lobata HOM05D007501 ORTHO05D009528 2.8e-44 182.6 191 53.4
FvH4_3g17620 Fragaria vesca HOM05D007501 ORTHO05D009528 8.1e-44 181.0 186 51.6
FAN11G3003 Fragaria x ananassa HOM05D007501 ORTHO05D009528 8.1e-44 181.0 186 51.6
Prupe.4G155600 Prunus persica HOM05D007501 ORTHO05D009528 2.4e-43 179.5 187 53.5
Gohir.D11G302600 Gossypium hirsutum HOM05D007501 ORTHO05D009528 4.0e-43 178.7 190 53.7
Gorai.007G332200 Gossypium raimondii HOM05D007501 ORTHO05D009528 5.2e-43 178.3 190 53.7
Gohir.A11G289800 Gossypium hirsutum HOM05D007501 ORTHO05D009528 6.9e-43 177.9 190 53.7
Haze_08443 Corylus avellana HOM05D007501 ORTHO05D009528 1.5e-42 176.8 184 51.6
Manes.15G099000 Manihot esculenta HOM05D007501 ORTHO05D009528 3.4e-42 175.6 195 50.3
Manes.03G078700 Manihot esculenta HOM05D007501 ORTHO05D009528 6.4e-41 171.4 199 48.7
Potri.011G103500 Populus trichocarpa HOM05D007501 ORTHO05D009528 6.4e-41 171.4 194 48.5
PSO675G1715 Papaver somniferum HOM05D007501 ORTHO05D009528 8.4e-41 171.0 188 52.7
Cfa019508 Carpinus fangiana HOM05D007501 ORTHO05D009528 1.4e-40 170.2 193 49.7
Nn3g20958 Nelumbo nucifera HOM05D007501 ORTHO05D009528 1.4e-40 170.2 162 55.6
COL.COLO4_03607 Corchorus olitorius HOM05D007501 ORTHO05D009528 3.2e-40 169.1 190 48.4
Duzib213G0875 Durio zibethinus HOM05D007501 ORTHO05D009528 4.2e-40 168.7 183 50.8
Ciclev10024060m.g Citrus clementina HOM05D007501 ORTHO05D009528 5.4e-40 168.3 190 48.9
PSO541G4098 Papaver somniferum HOM05D007501 ORTHO05D009528 1.2e-39 167.2 188 51.1
PGSC0003DMG400021255 Solanum tuberosum HOM05D007501 ORTHO05D009528 1.2e-39 167.2 186 52.2
Eucgr.F01372 Eucalyptus grandis HOM05D007501 ORTHO05D009528 1.6e-39 166.8 173 55.5
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 1.6e-39 166.8 207 46.9
HanXRQChr11g0331231 Helianthus annuus HOM05D007501 ORTHO05D009528 3.5e-39 165.6 190 51.1
ECA236G0060 Erigeron canadensis HOM05D007501 ORTHO05D009528 2.3e-38 162.9 185 51.4
Lj3g0021891 Lotus japonicus HOM05D007501 ORTHO05D009528 2.3e-38 162.9 204 44.6
Potri.001G382800 Populus trichocarpa HOM05D007501 ORTHO05D009528 3.0e-38 162.5 200 49.0
Glyma.15G211700 Glycine max HOM05D007501 ORTHO05D009528 8.7e-38 161.0 203 46.3
VMungo1127G2061 Vigna mungo HOM05D007501 ORTHO05D009528 8.7e-38 161.0 212 43.9
Peaxi162Scf01338g00001 Petunia axillaris HOM05D007501 ORTHO05D009528 1.1e-37 160.6 164 54.3
Glyma.15G210500 Glycine max HOM05D007501 ORTHO05D009528 1.9e-37 159.8 205 45.4
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 9.6e-37 157.5 189 49.7
Solyc10g007490.2 Solanum lycopersicum HOM05D007501 ORTHO05D009528 2.1e-36 156.4 186 48.9
Sabra11G0077300 Salix brachista HOM05D007501 ORTHO05D009528 2.8e-36 156.0 189 47.1
DCAR_019618 Daucus carota HOM05D007501 ORTHO05D009528 3.6e-36 155.6 190 51.6
Sopen10g003430 Solanum pennellii HOM05D007501 ORTHO05D009528 6.2e-36 154.8 186 48.9
TWI39G1127 Tripterygium wilfordii HOM05D007501 ORTHO05D009528 1.1e-35 154.1 176 48.9
Sabra11G0082200 Salix brachista HOM05D007501 ORTHO05D009528 1.4e-35 153.7 189 46.6
arahy.Tifrunner.gnm1.ann1.5U50EQ Arachis hypogaea HOM05D007501 ORTHO05D009528 6.9e-35 151.4 174 48.9
Thecc.07G134800 Theobroma cacao HOM05D007501 ORTHO05D009528 4.5e-34 148.7 190 46.8
PGR083G0065 Punica granatum HOM05D007501 ORTHO05D009528 7.6e-34 147.9 188 46.3
Aqoxy4G00171 Aquilegia oxysepala HOM05D007501 ORTHO05D009528 1.1e-32 144.1 184 46.2
AL3G27070 Arabidopsis lyrata HOM05D007501 ORTHO05D009528 1.4e-32 143.7 189 48.7
CiPaw.12G110200 Carya illinoinensis HOM05D007501 ORTHO05D009528 4.2e-32 142.1 196 45.4
CARHR089710 Cardamine hirsuta HOM05D007501 ORTHO05D009528 5.4e-32 141.7 185 45.9
Thhalv10021658m.g Eutrema salsugineum HOM05D007501 ORTHO05D009528 9.3e-32 141.0 189 47.6
A01p39060 Brassica napus HOM05D007501 ORTHO05D009528 2.7e-31 139.4 189 47.6
Carub.0003s1443 Capsella rubella HOM05D007501 ORTHO05D009528 2.7e-31 139.4 189 47.1
Dinv26703 Davidia involucrata HOM05D007501 ORTHO05D009528 3.5e-31 139.0 131 58.0
Psat4g135600 Pisum sativum HOM05D007501 ORTHO05D009528 7.9e-31 137.9 214 40.2
Sp3g12990 Schrenkiella parvula HOM05D007501 ORTHO05D009528 7.9e-31 137.9 186 45.2
BraA01t03953Z Brassica rapa HOM05D007501 ORTHO05D009528 1.0e-30 137.5 186 46.8
BolC1t04925H Brassica oleracea HOM05D007501 ORTHO05D009528 1.8e-30 136.7 186 46.8
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 3.0e-30 136.0 163 46.6
SalBow8G3616 Salvia bowleyana HOM05D007501 ORTHO05D009528 3.9e-30 135.6 156 47.4
C01p49690 Brassica napus HOM05D007501 ORTHO05D009528 6.7e-30 134.8 186 46.8
AT3G14760 Arabidopsis thaliana HOM05D007501 ORTHO05D009528 1.1e-29 134.0 189 47.6
TPR.G16483 Trifolium pratense HOM05D007501 ORTHO05D009528 7.4e-29 131.3 215 39.1
Aa31LG8G1980 Aethionema arabicum HOM05D007501 ORTHO05D009528 1.3e-28 130.6 183 41.5
arahy.Tifrunner.gnm1.ann1.652QPS Arachis hypogaea HOM05D007501 ORTHO05D009528 2.1e-28 129.8 174 46.0
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 2.8e-28 129.4 193 42.0
Peaxi162Scf00111g00124 Petunia axillaris HOM05D007501 ORTHO05D009528 3.7e-28 129.0 156 46.8
PGSC0003DMG400043590 Solanum tuberosum HOM05D007501 ORTHO05D009528 4.8e-28 128.6 163 46.0
Medtr8g042500 Medicago truncatula HOM05D007501 ORTHO05D009528 1.1e-27 127.5 217 39.2
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 1.8e-27 126.7 169 47.9
Nitab4.5_0000383g0020 Nicotiana tabacum HOM05D007501 ORTHO05D009528 2.4e-27 126.3 148 50.0
Sopen07g030380 Solanum pennellii HOM05D007501 ORTHO05D009528 5.3e-27 125.2 163 45.4
Nitab4.5_0008460g0030 Nicotiana tabacum HOM05D007501 ORTHO05D009528 4.5e-26 122.1 159 47.8
CAN.G375.54 Capsicum annuum HOM05D007501 ORTHO05D009528 3.8e-25 119.0 155 45.2
Nitab4.5_0001140g0140 Nicotiana tabacum HOM05D007501 ORTHO05D009528 1.4e-24 117.1 158 47.5
BcaC09g48445 Brassica carinata HOM05D007501 ORTHO05D009528 9.3e-24 114.4 174 44.3
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 6.7e-22 108.2 156 42.3
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 1.1e-21 107.5 210 38.6
AUR62013946 Chenopodium quinoa HOM05D007501 ORTHO05D009528 1.5e-21 107.1 172 38.4
MELO3C027342.2 Cucumis melo HOM05D007501 ORTHO05D009528 4.3e-21 105.5 156 41.7
CsaV3_4G032800 Cucumis sativus L. HOM05D007501 ORTHO05D009528 5.6e-21 105.1 186 39.2
AUR62019665 Chenopodium quinoa HOM05D007501 ORTHO05D009528 8.2e-20 101.3 169 37.3
ClCG11G017140 Citrullus lanatus HOM05D007501 ORTHO05D009528 5.3e-19 98.6 156 39.1
Lalb_Chr03g0031351 Lupinus albus HOM05D007501 ORTHO05D009528 4.9e-17 92.0 156 37.8
Sed0021060 Sechium edule HOM05D007501 ORTHO05D009528 1.1e-16 90.9 185 36.2
Peaxi162Scf00069g01713 Petunia axillaris HOM05D007501 ORTHO05D009528 1.9e-16 90.1 90 55.6
ATR0681G022 Amborella trichopoda HOM05D007501 ORTHO05D009528 5.1e-14 82.0 164 37.8
EL10Ac4g08429 Beta vulgaris HOM05D007501 ORTHO05D009528 4.3e-13 79.0 95 45.3
Os02g0320600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 1.7e-09 67.0 44 61.4
Os02g0321600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 6.5e-09 65.1 59 54.2
Zm00001eb055040 Zea mays HOM05D007501 ORTHO05D009528 6.5e-09 65.1 37 73.0
Zm00001eb314570 Zea mays HOM05D007501 ORTHO05D009528 1.4e-08 63.9 57 50.9
Zm00001eb100670 Zea mays HOM05D007501 ORTHO05D009528 4.2e-08 62.4 33 72.7
SEGI_41065 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 7.2e-08 61.6 52 53.8
SMO367G0928 Selaginella moellendorffii HOM05D002803 ORTHO05D003089 1.4e-06 57.4 113 34.5
SEGI_16996 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 1.4e-06 57.4 40 60.0
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 3.9e-06 55.8 99 36.4
ATR0053G026 Amborella trichopoda HOM05D002803 ORTHO05D003089 3.9e-06 55.8 77 36.4
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 8.8e-06 54.7 76 38.2


User provided reference genes

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