Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000833 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004038 3.5e-118 428.3 220 100.0
Actinidia16225 Actinidia chinensis HOM05D000141 ORTHO05D004038 4.8e-67 258.5 221 63.8
Dinv06246 Davidia involucrata HOM05D000141 ORTHO05D004038 1.1e-47 194.1 230 53.5
Dinv15520 Davidia involucrata HOM05D000141 ORTHO05D004038 1.1e-47 194.1 230 53.5
vmacro04278 Vaccinium macrocarpon HOM05D000141 ORTHO05D004038 4.1e-26 122.5 191 45.5
Rhsim13G0235100 Rhododendron simsii HOM05D000141 ORTHO05D004038 2.7e-25 119.8 189 42.9
Potri.001G000800 Populus trichocarpa HOM05D000141 ORTHO05D004038 1.4e-21 107.5 227 37.4
Atru.chr3.2046 Acer truncatum HOM05D000141 ORTHO05D004038 1.2e-20 104.4 227 39.2
QL01p007777 Quercus lobata HOM05D000141 ORTHO05D004038 1.2e-20 104.4 230 39.1
Prupe.6G000800 Prunus persica HOM05D000141 ORTHO05D004038 1.5e-20 104.0 231 35.1
Thecc.09G206200 Theobroma cacao HOM05D000141 ORTHO05D004038 2.2e-19 100.1 229 37.1
RcHm_v2.0_Chr5g0084121 Rosa chinensis HOM05D000141 ORTHO05D004038 4.9e-19 99.0 209 38.3
Sabra01G0000700 Salix brachista HOM05D000141 ORTHO05D004038 8.3e-19 98.2 225 34.2
Potri.003G223800 Populus trichocarpa HOM05D000141 ORTHO05D004038 1.8e-18 97.1 224 35.7
FvH4_3g46040 Fragaria vesca HOM05D000141 ORTHO05D004038 4.6e-17 92.4 198 37.4
FAN21G0611 Fragaria x ananassa HOM05D000141 ORTHO05D004038 2.3e-16 90.1 198 37.9
Duzib170G0369 Durio zibethinus HOM05D000141 ORTHO05D004038 3.9e-16 89.4 227 36.1
Cfa009525 Carpinus fangiana HOM05D000141 ORTHO05D004038 5.0e-16 89.0 228 34.6
TWI34G1411 Tripterygium wilfordii HOM05D000141 ORTHO05D004038 6.6e-16 88.6 227 34.4
Ciclev10014163m.g Citrus clementina HOM05D000141 ORTHO05D004038 2.1e-14 83.6 236 36.4
FAN16G0239 Fragaria x ananassa HOM05D000141 ORTHO05D004038 2.1e-14 83.6 198 35.9
Manes.15G111300 Manihot esculenta HOM05D000141 ORTHO05D004038 2.1e-14 83.6 227 33.5
Sabra03G0166200 Salix brachista HOM05D000141 ORTHO05D004038 6.8e-13 78.6 228 31.6
Haze_22916 Corylus avellana HOM05D000141 ORTHO05D004038 1.2e-12 77.8 228 33.3
GSVIVG01025512001 Vitis vinifera HOM05D000141 ORTHO05D004038 3.4e-12 76.3 180 35.0
COL.COLO4_35062 Corchorus olitorius HOM05D000141 ORTHO05D004038 4.4e-12 75.9 229 30.6
FAN11G3403 Fragaria x ananassa HOM05D000141 ORTHO05D004038 4.9e-11 72.4 154 38.3
MD03G1001300 Malus domestica HOM05D000141 ORTHO05D004038 8.3e-11 71.6 232 28.9
Cpa.g.sc119.9 Carica papaya HOM05D000141 ORTHO05D004038 3.2e-10 69.7 232 31.0
Nitab4.5_0000890g0100 Nicotiana tabacum HOM05D000141 ORTHO05D004038 4.1e-10 69.3 223 31.4
TAR633G0592 Trochodendron aralioides HOM05D000141 ORTHO05D004038 6.0e-09 65.5 248 31.0
TWI32G0986 Tripterygium wilfordii HOM05D000141 ORTHO05D004038 7.3e-07 58.5 153 32.7
Nn7g35784 Nelumbo nucifera HOM05D000141 ORTHO05D004038 2.8e-06 56.6 55 58.2
Nn7g35786 Nelumbo nucifera HOM05D000141 ORTHO05D004038 2.8e-06 56.6 55 58.2
Gorai.004G097800 Gossypium raimondii HOM05D000141 ORTHO05D004038 3.6e-06 56.2 226 30.5
Nn7g35771 Nelumbo nucifera HOM05D000141 ORTHO05D004038 6.2e-06 55.5 96 42.7


User provided reference genes

Program Settings