Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 9.5e-107 390.2 198 100.0
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 1.3e-87 326.6 169 98.2
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 2.2e-87 325.9 170 95.9
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 3.8e-87 325.1 180 91.1
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 3.8e-87 325.1 170 97.1
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 4.9e-87 324.7 170 96.5
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 6.4e-87 324.3 170 96.5
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 6.4e-87 324.3 170 96.5
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.1e-86 323.6 170 96.5
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 1.4e-86 323.2 170 95.3
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 1.4e-86 323.2 170 95.3
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 1.9e-86 322.8 170 95.9
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 2.4e-86 322.4 170 95.9
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 2.4e-86 322.4 170 95.9
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 3.2e-86 322.0 170 96.5
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 4.2e-86 321.6 170 95.3
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 4.2e-86 321.6 170 95.3
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 4.2e-86 321.6 170 95.3
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 4.2e-86 321.6 169 96.4
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 5.4e-86 321.2 170 94.7
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 5.4e-86 321.2 170 95.3
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 5.4e-86 321.2 170 95.9
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 7.1e-86 320.9 170 95.3
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 9.3e-86 320.5 170 94.7
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 9.3e-86 320.5 170 95.3
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 1.2e-85 320.1 169 95.9
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 1.6e-85 319.7 170 95.3
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 1.6e-85 319.7 170 94.7
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 1.6e-85 319.7 170 95.3
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 1.6e-85 319.7 170 94.1
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 2.1e-85 319.3 170 94.7
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 2.1e-85 319.3 170 94.1
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 2.7e-85 318.9 170 94.7
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 3.5e-85 318.5 170 94.1
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 6.0e-85 317.8 170 94.1
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 6.0e-85 317.8 170 94.1
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 7.8e-85 317.4 170 94.1
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 7.8e-85 317.4 169 95.9
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 7.8e-85 317.4 170 94.1
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 1.0e-84 317.0 170 93.5
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.0e-84 317.0 168 94.6
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.0e-84 317.0 168 94.6
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.0e-84 317.0 168 94.6
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.3e-84 316.6 170 93.5
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.7e-84 316.2 168 93.5
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 1.7e-84 316.2 170 93.5
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 2.3e-84 315.8 168 95.2
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 3.0e-84 315.5 170 93.5
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 5.1e-84 314.7 170 92.9
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 5.1e-84 314.7 170 92.9
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 5.1e-84 314.7 170 92.9
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 5.1e-84 314.7 170 93.5
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 6.6e-84 314.3 170 92.9
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 6.6e-84 314.3 170 92.9
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 6.6e-84 314.3 170 92.9
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 6.6e-84 314.3 170 92.9
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 8.7e-84 313.9 167 94.6
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 8.7e-84 313.9 170 92.9
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 8.7e-84 313.9 176 92.0
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 7.3e-83 310.8 171 93.6
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 7.3e-83 310.8 170 91.2
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 2.1e-82 309.3 188 85.6
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 2.8e-82 308.9 166 92.8
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 4.8e-82 308.1 183 87.4
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 6.2e-82 307.8 171 92.4
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.1e-81 307.0 170 92.9
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 1.8e-81 306.2 183 86.9
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 3.1e-81 305.4 170 89.4
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 4.0e-81 305.1 170 92.4
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 6.9e-81 304.3 190 85.3
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 2.9e-79 298.9 168 89.9
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 3.8e-79 298.5 157 94.3
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 7.1e-78 294.3 168 86.9
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 9.3e-78 293.9 157 93.6
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 1.2e-77 293.5 167 87.4
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 7.9e-77 290.8 175 88.0
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 5.1e-76 288.1 162 90.7
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.9e-75 286.2 151 95.4
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 2.5e-75 285.8 150 96.0
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 7.3e-75 284.3 164 87.2
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 1.3e-74 283.5 151 94.0
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 3.6e-74 282.0 147 97.3
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 6.9e-73 277.7 147 95.2
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 3.8e-71 271.9 173 76.9
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 4.9e-71 271.6 147 93.2
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 1.4e-70 270.0 140 95.7
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 4.2e-70 268.5 140 95.0
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 4.2e-70 268.5 141 95.0
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 5.5e-70 268.1 139 97.1
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 3.5e-69 265.4 141 93.6
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 3.9e-68 261.9 170 81.2
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 3.7e-66 255.4 262 58.0
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 4.8e-66 255.0 164 81.7
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 1.3e-63 246.9 170 79.4
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 3.8e-63 245.4 170 77.6
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 3.8e-63 245.4 128 96.9
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 6.5e-63 244.6 168 78.0
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 1.4e-62 243.4 130 96.2
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.3e-59 231.9 120 100.0
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.3e-59 231.9 120 100.0
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 9.6e-59 230.7 125 95.2
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 2.8e-58 229.2 229 61.6
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 1.5e-56 223.4 233 57.9
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 7.6e-56 221.1 129 86.0
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 8.7e-52 207.6 109 97.2
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 3.3e-51 205.7 169 60.9
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 4.3e-51 205.3 110 93.6
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 6.7e-44 181.4 115 81.7
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 2.2e-42 176.4 173 53.2
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.5e-40 170.2 166 59.6
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 8.2e-34 147.9 117 68.4
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 7.0e-33 144.8 76 93.4
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 9.1e-33 144.4 75 96.0
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 2.0e-32 143.3 75 94.7
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.5e-30 137.1 66 97.0
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.0e-28 129.4 67 92.5
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 4.1e-25 119.0 73 79.5
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 2.0e-24 116.7 60 95.0
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 1.0e-23 114.4 69 87.0
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 4.4e-19 99.0 50 94.0
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 1.7e-07 60.5 59 61.0


User provided reference genes

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