Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000769 Camellia sinensis var. sinensis HOM05D000223 ORTHO05D111089 2.6e-64 248.4 117 100.0
vmacro06555 Vaccinium macrocarpon HOM05D000223 ORTHO05D001289 4.9e-26 121.3 86 69.8
Rhsim03G0200600 Rhododendron simsii HOM05D000223 ORTHO05D001289 7.8e-24 114.0 86 65.1
Dinv05474 Davidia involucrata HOM05D000223 ORTHO05D001289 1.3e-23 113.2 86 67.4
CSS0031252 Camellia sinensis var. sinensis HOM05D000223 ORTHO05D001289 1.5e-22 109.8 86 65.1
Actinidia34205 Actinidia chinensis HOM05D000598 ORTHO05D001289 8.0e-21 104.0 86 64.0
Lj3A908G66 Lonicera japonica HOM05D000223 ORTHO05D001289 1.2e-16 90.1 86 55.8
TAR375G0127 Trochodendron aralioides HOM05D000223 ORTHO05D001289 2.7e-16 89.0 86 50.0
Hma1.2p1_0538F.1_g174460 Hydrangea macrophylla HOM05D000223 ORTHO05D001289 7.8e-16 87.4 86 54.7
Oeu041340.1 Olea europaea HOM05D000223 ORTHO05D001289 7.8e-16 87.4 86 58.1
Actinidia06162 Actinidia chinensis HOM05D000223 ORTHO05D001289 2.3e-15 85.9 77 55.8
Cpa.g.sc405.1 Carica papaya HOM05D000223 ORTHO05D001289 3.0e-15 85.5 86 52.3
Nitab4.5_0009157g0020 Nicotiana tabacum HOM05D000223 ORTHO05D001289 5.1e-15 84.7 87 54.0
TAR374G0235 Trochodendron aralioides HOM05D000223 ORTHO05D001289 1.1e-14 83.6 86 48.8
Nitab4.5_0005134g0010 Nicotiana tabacum HOM05D000223 ORTHO05D001289 1.5e-14 83.2 87 52.9
CiPaw.05G256700 Carya illinoinensis HOM05D000223 ORTHO05D001289 9.5e-14 80.5 79 53.2
Thecc.03G194300 Theobroma cacao HOM05D000223 ORTHO05D001289 9.5e-14 80.5 87 49.4
Atru.chr1.234 Acer truncatum HOM05D000223 ORTHO05D001289 1.2e-13 80.1 88 48.9
Ciclev10005301m.g Citrus clementina HOM05D000223 ORTHO05D001289 1.6e-13 79.7 86 48.8
Oeu049106.2 Olea europaea HOM05D000223 ORTHO05D001289 4.7e-13 78.2 86 52.3
Migut.F01042 Erythranthe guttata HOM05D000223 ORTHO05D001289 1.8e-12 76.3 86 51.2
Manes.14G007652 Manihot esculenta HOM05D000223 ORTHO05D001289 1.8e-12 76.3 86 47.7
Oeu032286.2 Olea europaea HOM05D000223 ORTHO05D001289 1.8e-12 76.3 86 50.0
Potri.015G019200 Populus trichocarpa HOM05D000223 ORTHO05D001289 3.1e-12 75.5 88 48.9
SalBow2G3073 Salvia bowleyana HOM05D000223 ORTHO05D001289 6.8e-12 74.3 86 52.3
GSVIVG01028710001 Vitis vinifera HOM05D000223 ORTHO05D001289 6.8e-12 74.3 86 47.7
Nn1g01885 Nelumbo nucifera HOM05D000223 ORTHO05D001289 8.9e-12 73.9 89 44.9
MSTRG.8494 Avicennia marina HOM05D000223 ORTHO05D001289 3.4e-11 72.0 86 50.0
CAN.G108.39 Capsicum annuum HOM05D000223 ORTHO05D001289 3.4e-11 72.0 86 46.5
Duzib205G1115 Durio zibethinus HOM05D000223 ORTHO05D001289 1.3e-10 70.1 88 45.5
Glyma.14G161400 Glycine max HOM05D000223 ORTHO05D001289 2.2e-10 69.3 86 40.7
Peaxi162Scf00904g00011 Petunia axillaris HOM05D000223 ORTHO05D001289 2.2e-10 69.3 89 48.3
CsaV3_3G022030 Cucumis sativus L. HOM05D000223 ORTHO05D001289 2.9e-10 68.9 86 45.3
Phvul.001G061300 Phaseolus vulgaris HOM05D000223 ORTHO05D001289 2.9e-10 68.9 86 40.7
VMungo0647G2295 Vigna mungo HOM05D000223 ORTHO05D001289 6.4e-10 67.8 87 42.5
THA.LOC104811929 Tarenaya hassleriana HOM05D000223 ORTHO05D001289 1.1e-09 67.0 86 45.3
Haze_00126 Corylus avellana HOM05D000223 ORTHO05D001289 1.4e-09 66.6 79 45.6
Glyma.13G042100 Glycine max HOM05D000223 ORTHO05D001289 1.4e-09 66.6 86 40.7
Manes.06G158500 Manihot esculenta HOM05D000223 ORTHO05D001289 1.4e-09 66.6 86 43.0
TWI14G0712 Tripterygium wilfordii HOM05D000223 ORTHO05D001289 1.9e-09 66.2 86 43.0
Duzib068G0602 Durio zibethinus HOM05D000223 ORTHO05D001289 3.2e-09 65.5 87 42.5
Sabra15G0014600 Salix brachista HOM05D000223 ORTHO05D001289 4.1e-09 65.1 88 44.3
MELO3C006983.2 Cucumis melo HOM05D000223 ORTHO05D001289 7.1e-09 64.3 88 43.2
HanXRQChr13g0393121 Helianthus annuus HOM05D000223 ORTHO05D001289 1.6e-08 63.2 87 43.7
RcHm_v2.0_Chr1g0380251 Rosa chinensis HOM05D000223 ORTHO05D001289 1.6e-08 63.2 87 43.7
ClCG05G008770 Citrullus lanatus HOM05D000223 ORTHO05D001289 2.1e-08 62.8 86 41.9
Eucgr.A01489 Eucalyptus grandis HOM05D000223 ORTHO05D001289 2.1e-08 62.8 86 41.9
CANSAT21G1697 Cannabis sativa HOM05D000223 ORTHO05D001289 2.7e-08 62.4 87 39.1
Gohir.D12G251900 Gossypium hirsutum HOM05D000223 ORTHO05D001289 3.5e-08 62.0 88 46.6
Gorai.008G270000 Gossypium raimondii HOM05D000223 ORTHO05D001289 3.5e-08 62.0 88 46.6
Prupe.2G308600 Prunus persica HOM05D000223 ORTHO05D001289 4.6e-08 61.6 86 40.7
Sabra12G0019300 Salix brachista HOM05D000223 ORTHO05D001289 4.6e-08 61.6 89 46.1
Sed0007715 Sechium edule HOM05D000223 ORTHO05D001289 4.6e-08 61.6 88 40.9
Sed0001892 Sechium edule HOM05D000223 ORTHO05D001289 6.0e-08 61.2 86 41.9
Potri.012G002100 Populus trichocarpa HOM05D000223 ORTHO05D001289 7.8e-08 60.8 88 45.5
SGA_v2.0_scaffold10G05246 Striga asiatica HOM05D000223 ORTHO05D001289 7.8e-08 60.8 86 46.5
Duzib084G1303 Durio zibethinus HOM05D000223 ORTHO05D001289 1.0e-07 60.5 63 47.6
QL09p010558 Quercus lobata HOM05D000223 ORTHO05D001289 1.0e-07 60.5 79 43.0
THA.LOC104800300 Tarenaya hassleriana HOM05D000223 ORTHO05D001289 1.0e-07 60.5 86 39.5
Gohir.A12G251100 Gossypium hirsutum HOM05D000223 ORTHO05D001289 1.3e-07 60.1 88 45.5
Lsat_1_v5_gn_8_4981 Lactuca sativa HOM05D000223 ORTHO05D001289 1.3e-07 60.1 87 39.1
Lalb_Chr01g0013711 Lupinus albus HOM05D000223 ORTHO05D001289 1.3e-07 60.1 89 40.4
MD07G1286600 Malus domestica HOM05D000223 ORTHO05D001289 1.7e-07 59.7 86 40.7
Hund11679 Selenicereus undatus HOM05D000223 ORTHO05D001289 1.7e-07 59.7 89 41.6
SGA_v2.0_scaffold55G19752 Striga asiatica HOM05D000223 ORTHO05D001289 2.3e-07 59.3 86 44.2
BcaB01g04227 Brassica carinata HOM05D000223 ORTHO05D001289 3.0e-07 58.9 87 43.7
FAN03G1446 Fragaria x ananassa HOM05D000223 ORTHO05D001289 3.9e-07 58.5 86 39.5
Sc25g0000830 Simmondsia chinensis HOM05D000223 ORTHO05D001289 3.9e-07 58.5 89 40.4
AUR62019354 Chenopodium quinoa HOM05D000223 ORTHO05D001289 5.1e-07 58.2 89 39.3
Sp6g15320 Schrenkiella parvula HOM05D000223 ORTHO05D001289 5.1e-07 58.2 87 43.7
Cc02_g01770 Coffea canephora HOM05D000223 ORTHO05D001289 8.6e-07 57.4 33 75.8
Solyc03g007270.3 Solanum lycopersicum HOM05D000223 ORTHO05D001289 8.6e-07 57.4 33 75.8
Sopen03g003240 Solanum pennellii HOM05D000223 ORTHO05D001289 8.6e-07 57.4 33 75.8
PGSC0003DMG400009111 Solanum tuberosum HOM05D000223 ORTHO05D001289 1.1e-06 57.0 33 75.8
Thhalv10013676m.g Eutrema salsugineum HOM05D000223 ORTHO05D001289 1.5e-06 56.6 86 39.5
FAN01G2671 Fragaria x ananassa HOM05D000223 ORTHO05D001289 1.9e-06 56.2 86 39.5
AUR62006135 Chenopodium quinoa HOM05D000223 ORTHO05D001289 7.3e-06 54.3 89 38.2


User provided reference genes

Program Settings