Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000753 Camellia sinensis var. sinensis HOM05D002872 ORTHO05D003204 2.5e-28 128.3 73 100.0
CSS0040810 Camellia sinensis var. sinensis HOM05D002872 ORTHO05D003204 2.5e-28 128.3 73 100.0
Dinv01806 Davidia involucrata HOM05D002872 ORTHO05D003204 1.2e-14 82.8 68 63.2
ECA233G5319 Erigeron canadensis HOM05D000141 ORTHO05D004038 1.6e-11 72.4 65 58.5
Hma1.2p1_0589F.1_g184710 Hydrangea macrophylla HOM05D002872 ORTHO05D003204 2.8e-11 71.6 38 86.8
Cc01_g00260 Coffea canephora HOM05D002872 ORTHO05D003204 4.7e-11 70.9 67 55.2
Rhsim13G0234800 Rhododendron simsii HOM05D002872 ORTHO05D003204 1.4e-10 69.3 70 57.1
Oeu018898.1 Olea europaea HOM05D002872 ORTHO05D003204 5.2e-10 67.4 39 82.1
Sopen01g019280 Solanum pennellii HOM05D002872 ORTHO05D003204 5.2e-10 67.4 39 82.1
Actinidia00918 Actinidia chinensis HOM05D002872 ORTHO05D003204 6.8e-10 67.0 68 64.7
Nitab4.5_0000890g0190 Nicotiana tabacum HOM05D002872 ORTHO05D003204 1.2e-09 66.2 40 75.0
Lsat_1_v5_gn_6_56180 Lactuca sativa HOM05D002872 ORTHO05D003204 1.5e-09 65.9 66 56.1
Lj2A888G14 Lonicera japonica HOM05D002872 ORTHO05D003204 2.0e-09 65.5 40 80.0
Solyc01g049960.4 Solanum lycopersicum HOM05D002872 ORTHO05D003204 5.8e-09 63.9 39 79.5
AUR62040893 Chenopodium quinoa HOM05D002872 ORTHO05D003204 7.5e-09 63.5 41 70.7
AUR62042622 Chenopodium quinoa HOM05D002872 ORTHO05D003204 7.5e-09 63.5 41 70.7
Aqoxy1G00089 Aquilegia oxysepala HOM05D002872 ORTHO05D003204 1.7e-08 62.4 65 50.8
Sc16g0012250 Simmondsia chinensis HOM05D002872 ORTHO05D003204 2.2e-08 62.0 39 71.8
Lsat_1_v5_gn_3_74580 Lactuca sativa HOM05D002872 ORTHO05D022846 2.9e-08 61.6 65 53.8
Ah.04g161360 Amaranthus hybridus HOM05D000115 ORTHO05D000464 3.7e-08 61.2 66 48.5
Lsat_1_v5_gn_3_41961 Lactuca sativa HOM05D000912 ORTHO05D008576 6.4e-08 60.5 66 53.0
Aqoxy386s003 Aquilegia oxysepala HOM05D002872 ORTHO05D003204 1.1e-07 59.7 55 54.5
HanXRQChr02g0057611 Helianthus annuus HOM05D002872 ORTHO05D003204 5.4e-07 57.4 65 49.2
Migut.N00530 Erythranthe guttata HOM05D002872 ORTHO05D003204 7.0e-07 57.0 40 67.5
Nn2g15900 Nelumbo nucifera HOM05D002872 ORTHO05D003204 7.0e-07 57.0 68 50.0
MBI19_g09318_MAGBIO Magnolia biondii HOM05D002872 ORTHO05D003204 9.2e-07 56.6 39 64.1
Peaxi162Scf00186g01511 Petunia axillaris HOM05D002872 ORTHO05D003204 9.2e-07 56.6 39 69.2
TAR623G1141 Trochodendron aralioides HOM05D002872 ORTHO05D003204 7.8e-06 53.5 39 64.1


User provided reference genes

Program Settings