Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 7.9e-126 453.8 224 100.0
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 3.3e-63 245.7 230 63.0
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 3.3e-63 245.7 230 63.0
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.0e-61 238.8 187 71.7
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.8e-61 238.0 188 69.7
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 2.4e-58 229.6 182 69.8
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 2.9e-51 206.1 194 63.9
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 3.8e-51 205.7 234 55.6
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.9e-50 203.4 230 55.7
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 1.9e-50 203.4 230 55.7
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.2e-49 200.7 146 74.0
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.5e-49 199.1 189 63.0
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 1.0e-48 197.6 143 74.8
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 1.3e-48 197.2 190 62.1
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 3.0e-48 196.1 227 55.5
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.9e-48 195.7 226 54.9
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.5e-47 193.7 164 65.2
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.5e-47 193.0 136 74.3
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 3.3e-47 192.6 193 61.7
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 8.1e-46 188.0 188 59.0
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 7.6e-44 181.4 174 61.5
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 3.8e-43 179.1 190 58.4
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 3.8e-43 179.1 190 58.4
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 3.8e-43 179.1 190 58.4
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 3.8e-43 179.1 190 58.4
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 3.8e-43 179.1 243 49.8
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.2e-42 175.6 117 75.2
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 2.1e-41 173.3 227 52.4
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.6e-41 172.2 113 77.9
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 6.0e-41 171.8 118 73.7
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 1.7e-40 170.2 142 64.1
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.9e-40 169.1 117 76.1
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 3.9e-40 169.1 102 81.4
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 3.9e-40 169.1 102 81.4
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.1e-40 168.7 122 72.1
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.5e-39 167.2 143 61.5
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 3.3e-39 166.0 148 64.9
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.3e-39 165.6 139 64.0
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 1.3e-38 164.1 142 62.0
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 1.3e-38 164.1 101 78.2
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 1.4e-37 160.6 97 82.5
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 4.0e-37 159.1 136 62.5
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 1.2e-36 157.5 154 56.5
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 1.5e-36 157.1 97 80.4
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 3.4e-36 156.0 101 75.2
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.4e-36 156.0 135 63.0
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.4e-36 156.0 135 63.0
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 4.5e-36 155.6 100 74.0
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.7e-35 153.7 99 76.8
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 2.9e-35 152.9 104 71.2
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.1e-34 151.0 139 61.9
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 9.3e-34 147.9 139 61.2
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.0e-32 142.9 97 74.2
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 3.0e-32 142.9 150 56.7
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.9e-32 142.5 101 71.3
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 5.1e-32 142.1 101 72.3
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 1.9e-31 140.2 82 81.7
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 2.1e-30 136.7 150 55.3
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 2.1e-30 136.7 150 55.3
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-29 134.4 152 50.7
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.4e-29 134.0 143 52.4
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 1.4e-29 134.0 168 51.8
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.8e-29 133.7 146 52.1
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.1e-29 132.9 137 58.4
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.1e-29 132.9 143 55.9
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.6e-28 129.8 98 68.4
Glyma.05G084600 Glycine max HOM05D000963 ORTHO05D005131 1.3e-27 127.5 154 48.1
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 1.1e-26 124.4 73 84.9
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.9e-26 123.6 98 65.3
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.5e-26 123.2 73 83.6
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.2e-26 122.9 88 72.7
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 9.3e-26 121.3 74 81.1
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.0e-25 118.6 139 56.1
Manes.02G203601 Manihot esculenta HOM05D000963 ORTHO05D005131 6.0e-25 118.6 175 45.7
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-24 117.1 134 54.5
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 3.0e-24 116.3 107 59.8
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 5.1e-24 115.5 71 77.5
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 6.7e-24 115.2 110 59.1
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 8.7e-24 114.8 93 66.7
Medtr8g040260 Medicago truncatula HOM05D000963 ORTHO05D005131 1.9e-23 113.6 223 37.7
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 7.4e-23 111.7 204 39.7
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 1.3e-22 110.9 95 65.3
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.1e-22 110.2 73 76.7
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 6.3e-22 108.6 105 58.1
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 8.2e-22 108.2 67 76.1
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.4e-21 106.7 80 63.8
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 4.1e-21 105.9 80 66.2
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 4.1e-21 105.9 82 68.3
arahy.Tifrunner.gnm1.ann1.J9XL5M Arachis hypogaea HOM05D000963 ORTHO05D005131 5.3e-21 105.5 91 68.1
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 5.3e-21 105.5 79 68.4
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 9.0e-21 104.8 80 62.5
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.6e-20 103.2 70 71.4
SEGI_10061 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 2.6e-20 103.2 125 47.2
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 3.4e-20 102.8 59 79.7
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 5.9e-20 102.1 86 67.4
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 5.9e-20 102.1 86 67.4
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 7.6e-20 101.7 96 58.3
arahy.Tifrunner.gnm1.ann1.LWFR1C Arachis hypogaea HOM05D000963 ORTHO05D005131 1.0e-19 101.3 85 69.4
MBI08_g48228_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 3.8e-19 99.4 85 68.2
arahy.Tifrunner.gnm1.ann1.A049RL Arachis hypogaea HOM05D000963 ORTHO05D005131 6.5e-19 98.6 53 83.0
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 8.5e-19 98.2 100 58.0
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 8.5e-19 98.2 87 63.2
HPP92_028387 Vanilla planifolia HOM05D000963 ORTHO05D005131 1.1e-18 97.8 91 63.7
Migut.D01497 Erythranthe guttata HOM05D000963 ORTHO05D005131 1.9e-18 97.1 137 50.4
Sed0026848 Sechium edule HOM05D000963 ORTHO05D005131 1.9e-18 97.1 54 81.5
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 2.5e-18 96.7 61 77.0
VMungo1215G3364 Vigna mungo HOM05D001592 ORTHO05D001533 2.5e-18 96.7 53 81.1
SGA_v2.0_scaffold140G35502 Striga asiatica HOM05D000963 ORTHO05D005131 3.2e-18 96.3 54 83.3
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.2e-18 95.9 54 81.5
Sopen08g004620 Solanum pennellii HOM05D001396 ORTHO05D000493 2.7e-17 93.2 57 77.2
Potri.002G073450 Populus trichocarpa HOM05D000963 ORTHO05D005131 4.6e-17 92.4 161 40.4
arahy.Tifrunner.gnm1.ann1.LAST4K Arachis hypogaea HOM05D000963 ORTHO05D005131 1.5e-15 87.4 53 71.7
VMungo1024G0002 Vigna mungo HOM05D000963 ORTHO05D005131 2.5e-15 86.7 114 45.6
Medtr3g035650 Medicago truncatula HOM05D000963 ORTHO05D005131 4.3e-15 85.9 53 75.5
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 5.7e-15 85.5 49 79.6
arahy.Tifrunner.gnm1.ann1.9M10FC Arachis hypogaea HOM05D000940 ORTHO05D000782 9.7e-15 84.7 49 77.6
Lsat_1_v5_gn_9_35301 Lactuca sativa HOM05D000963 ORTHO05D005131 1.3e-14 84.3 85 56.5
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 2.2e-14 83.6 54 74.1
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.4e-13 80.9 57 64.9
SHI36890 Sapria himalayana HOM05D000963 ORTHO05D005131 5.3e-13 79.0 73 64.4
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 1.5e-12 77.4 67 67.2
Nitab4.5_0008665g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.0e-12 77.0 67 59.7
CDE02G2642 Ceratophyllum demersum HOM05D000963 ORTHO05D005131 1.1e-10 71.2 75 53.3
CsaV3_4G036830 Cucumis sativus L. HOM05D000963 ORTHO05D005131 4.2e-10 69.3 40 80.0
CsaV3_UNG209450 Cucumis sativus L. HOM05D010604 ORTHO05D012476 4.2e-10 69.3 90 46.7
arahy.Tifrunner.gnm1.ann1.05XESX Arachis hypogaea HOM05D010604 ORTHO05D012476 5.5e-10 68.9 90 47.8
arahy.Tifrunner.gnm1.ann1.0LX666 Arachis hypogaea HOM05D010604 ORTHO05D012476 5.5e-10 68.9 90 47.8
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 7.2e-10 68.6 79 54.4
Lsat_1_v5_gn_5_152921 Lactuca sativa HOM05D010604 ORTHO05D012476 1.2e-09 67.8 90 46.7
arahy.Tifrunner.gnm1.ann1.KZ3I51 Arachis hypogaea HOM05D010604 ORTHO05D012476 2.1e-09 67.0 48 68.8
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 4.6e-09 65.9 90 45.6
VMungo0329G0006 Vigna mungo HOM05D010604 ORTHO05D012476 4.6e-09 65.9 90 46.7
Oeu012823.1 Olea europaea HOM05D000963 ORTHO05D005131 7.9e-09 65.1 44 70.5
Potri.007G062061 Populus trichocarpa HOM05D010604 ORTHO05D012476 7.9e-09 65.1 77 50.6
RhsimMtG0000800 Rhododendron simsii HOM05D010604 ORTHO05D012476 1.4e-08 64.3 48 66.7
Oeu043433.1 Olea europaea HOM05D000963 ORTHO05D005131 1.8e-08 63.9 59 57.6
Gorai.008G144300 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.0e-07 60.5 49 59.2
arahy.Tifrunner.gnm1.ann1.7DQW64 Arachis hypogaea HOM05D000963 ORTHO05D005131 3.3e-07 59.7 32 84.4
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 3.3e-07 59.7 42 69.0
Solyc00g500039.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 5.7e-07 58.9 32 81.2
Solyc00g500044.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 5.7e-07 58.9 32 81.2
Solyc00g500083.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 5.7e-07 58.9 32 81.2
Solyc00g500301.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 5.7e-07 58.9 32 81.2
Solyc00g500325.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 5.7e-07 58.9 32 81.2
BolSC46t60969H Brassica oleracea HOM05D000963 ORTHO05D005131 1.7e-06 57.4 62 53.2
Hma1.2p1_0045F.1_g026530 Hydrangea macrophylla HOM05D000963 ORTHO05D005131 2.2e-06 57.0 73 45.2
Sopen09g020260 Solanum pennellii HOM05D010604 ORTHO05D012476 2.2e-06 57.0 48 58.3
arahy.Tifrunner.gnm1.ann1.JE53Y0 Arachis hypogaea HOM05D000963 ORTHO05D005131 2.8e-06 56.6 38 76.3
Sopen10g016560 Solanum pennellii HOM05D000963 ORTHO05D005131 6.3e-06 55.5 38 73.7
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 8.2e-06 55.1 54 51.9
Sc25g0002260 Simmondsia chinensis HOM05D000963 ORTHO05D005131 8.2e-06 55.1 53 52.8


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