Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 1.9e-102 375.9 202 100.0
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.3e-70 268.9 196 77.0
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 4.9e-66 255.0 192 75.5
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 1.7e-63 246.5 177 75.7
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 8.6e-63 244.2 192 70.8
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 1.1e-62 243.8 195 69.2
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 3.3e-62 242.3 177 75.7
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 6.2e-61 238.0 165 75.2
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 8.0e-61 237.7 178 71.3
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 1.4e-60 236.9 182 70.9
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 2.3e-60 236.1 177 72.9
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 5.2e-60 235.0 163 76.7
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 1.5e-59 233.4 177 72.3
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 2.0e-59 233.0 186 67.7
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 5.8e-59 231.5 162 75.9
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 5.8e-59 231.5 194 66.5
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 9.8e-59 230.7 177 70.6
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 1.3e-58 230.3 175 72.6
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 2.2e-58 229.6 175 71.4
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 2.9e-58 229.2 185 69.7
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 6.4e-58 228.0 180 69.4
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 6.4e-58 228.0 186 67.2
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 8.3e-58 227.6 178 69.1
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 3.2e-57 225.7 180 67.8
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 7.1e-57 224.6 185 67.6
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 9.2e-57 224.2 179 70.4
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 1.6e-56 223.4 180 67.8
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 4.6e-56 221.9 179 67.0
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 6.0e-56 221.5 162 74.7
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 3.9e-55 218.8 154 77.3
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 5.1e-55 218.4 174 67.8
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 6.6e-55 218.0 168 71.4
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 8.6e-55 217.6 177 66.1
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.5e-54 216.1 177 66.1
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 3.3e-54 215.7 203 63.5
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.3e-54 215.7 177 66.1
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 3.3e-54 215.7 175 69.1
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 4.3e-54 215.3 184 67.4
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 5.6e-54 214.9 177 66.1
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 9.5e-54 214.2 173 67.1
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 1.2e-53 213.8 172 68.0
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.2e-53 213.8 180 67.8
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 1.6e-53 213.4 202 62.4
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 2.1e-53 213.0 199 62.3
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 2.8e-53 212.6 177 65.5
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 1.1e-52 210.7 176 65.3
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 1.4e-52 210.3 169 68.6
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 1.4e-52 210.3 169 68.6
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 3.1e-52 209.1 169 68.0
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 4.0e-52 208.8 179 65.4
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 4.0e-52 208.8 177 65.0
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 2.6e-51 206.1 155 71.0
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 4.4e-51 205.3 192 59.9
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 7.6e-51 204.5 179 65.9
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 2.2e-50 203.0 175 63.4
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 3.7e-50 202.2 178 64.6
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 3.7e-50 202.2 180 64.4
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 4.9e-50 201.8 198 58.6
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 6.4e-50 201.4 161 68.9
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 8.3e-50 201.1 175 62.9
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 1.1e-49 200.7 155 68.4
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 2.4e-49 199.5 169 66.3
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 2.4e-49 199.5 185 61.1
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 2.4e-49 199.5 149 69.8
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 9.2e-49 197.6 163 67.5
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 1.2e-48 197.2 163 66.9
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 1.6e-48 196.8 147 72.8
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 3.5e-48 195.7 149 68.5
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 4.6e-48 195.3 178 62.4
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 7.8e-48 194.5 179 62.0
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 1.7e-47 193.4 169 63.9
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 5.1e-47 191.8 162 64.8
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 6.6e-47 191.4 160 64.4
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 6.6e-47 191.4 188 60.1
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 4.3e-46 188.7 148 66.9
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 7.3e-46 188.0 188 60.1
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 9.6e-46 187.6 188 59.0
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 2.1e-45 186.4 112 85.7
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 2.1e-45 186.4 177 60.5
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 4.7e-45 185.3 168 61.9
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 1.1e-44 184.1 187 58.8
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 1.8e-44 183.3 149 67.1
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 3.1e-44 182.6 119 80.7
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 5.2e-44 181.8 165 61.8
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 5.2e-44 181.8 165 61.8
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 2.6e-43 179.5 181 55.8
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 5.8e-43 178.3 165 60.6
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 2.9e-42 176.0 159 64.2
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 3.2e-41 172.6 117 76.9
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 4.2e-41 172.2 150 64.0
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 7.1e-41 171.4 178 56.2
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 7.1e-41 171.4 145 65.5
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 4.6e-40 168.7 149 61.7
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 1.7e-39 166.8 150 62.7
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 1.7e-39 166.8 150 62.7
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 1.9e-38 163.3 173 57.8
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 1.9e-38 163.3 173 57.8
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.3e-37 160.6 189 54.0
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 4.0e-36 155.6 121 68.6
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 5.3e-36 155.2 115 69.6
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 1.2e-35 154.1 158 56.3
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 1.8e-28 130.2 82 76.8
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 2.4e-28 129.8 79 79.7
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 2.4e-28 129.8 86 77.9
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 6.9e-28 128.3 146 51.4
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.5e-27 127.1 162 48.8
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 1.5e-27 127.1 189 47.1
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.5e-27 125.6 167 49.7
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 7.6e-27 124.8 195 43.6
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.4e-25 119.8 129 63.6
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 4.8e-21 105.5 151 44.4
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 3.1e-20 102.8 149 43.6
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 1.6e-16 90.5 124 46.0
Rhsim01G0083000 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.5e-14 84.0 112 52.7
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 1.9e-14 83.6 178 37.6
Nitab4.5_0008976g0040 Nicotiana tabacum HOM05D006141 ORTHO05D007670 2.8e-13 79.7 80 57.5
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.1e-12 77.8 46 87.0
Rhsim01G0082000 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.8e-12 77.0 208 34.1
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 9.0e-12 74.7 44 77.3
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 1.3e-10 70.9 137 40.1
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 1.1e-09 67.8 45 68.9
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 6.1e-08 62.0 50 62.0
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 7.9e-08 61.6 124 36.3


User provided reference genes

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