Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 1.2e-29 133.7 153 100.0
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 4.3e-22 108.6 76 77.6
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 8.1e-21 104.4 64 81.2
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 8.1e-21 104.4 67 80.6
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 1.4e-20 103.6 61 88.5
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 2.3e-20 102.8 64 79.7
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 5.2e-20 101.7 67 74.6
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 5.2e-20 101.7 67 77.6
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 6.8e-20 101.3 67 77.6
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 8.9e-20 100.9 68 77.9
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 1.2e-19 100.5 64 78.1
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 1.2e-19 100.5 68 79.4
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 2.0e-19 99.8 67 77.6
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 4.4e-19 98.6 67 74.6
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 7.5e-19 97.8 67 77.6
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 1.3e-18 97.1 68 79.4
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 1.3e-18 97.1 68 75.0
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 1.3e-18 97.1 68 75.0
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 1.7e-18 96.7 67 77.6
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 1.7e-18 96.7 67 76.1
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 2.2e-18 96.3 67 73.1
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 3.7e-18 95.5 68 76.5
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 6.4e-18 94.7 67 71.6
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 6.4e-18 94.7 67 71.6
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 6.4e-18 94.7 68 75.0
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 8.3e-18 94.4 67 70.1
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 8.3e-18 94.4 62 82.3
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 2.4e-17 92.8 67 70.1
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 2.4e-17 92.8 68 72.1
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 3.2e-17 92.4 67 73.1
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 3.2e-17 92.4 66 74.2
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 3.2e-17 92.4 67 70.1
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 5.4e-17 91.7 67 71.6
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 5.4e-17 91.7 67 71.6
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 5.4e-17 91.7 62 75.8
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 5.4e-17 91.7 68 70.6
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 7.1e-17 91.3 62 77.4
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 1.2e-16 90.5 53 81.1
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 1.6e-16 90.1 65 72.3
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 1.6e-16 90.1 65 72.3
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 1.6e-16 90.1 68 69.1
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 1.6e-16 90.1 68 69.1
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 3.5e-16 89.0 67 68.7
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 4.6e-16 88.6 70 65.7
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 4.6e-16 88.6 65 73.8
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 7.8e-16 87.8 58 75.9
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 1.0e-15 87.4 67 68.7
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 1.3e-15 87.0 64 71.9
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 1.3e-15 87.0 67 68.7
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 3.0e-15 85.9 68 67.6
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 3.9e-15 85.5 65 70.8
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 3.9e-15 85.5 65 70.8
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 3.9e-15 85.5 62 64.5
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 3.9e-15 85.5 65 69.2
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 8.6e-15 84.3 64 68.8
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 1.1e-14 84.0 64 70.3
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 1.5e-14 83.6 67 62.7
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 1.9e-14 83.2 64 68.8
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 2.5e-14 82.8 64 70.3
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 4.3e-14 82.0 65 67.7
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 5.6e-14 81.6 53 71.7
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 5.6e-14 81.6 53 71.7
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 5.6e-14 81.6 53 71.7
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 5.6e-14 81.6 53 71.7
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 7.3e-14 81.3 50 82.0
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 9.5e-14 80.9 68 67.6
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 9.5e-14 80.9 54 74.1
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 1.2e-13 80.5 68 61.8
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 1.6e-13 80.1 67 64.2
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 2.1e-13 79.7 65 72.3
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 2.8e-13 79.3 67 68.7
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 3.6e-13 79.0 68 61.8
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 6.2e-13 78.2 67 64.2
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 1.1e-12 77.4 67 67.2
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 1.4e-12 77.0 50 76.0
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 1.8e-12 76.6 53 69.8
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 1.8e-12 76.6 67 59.7
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 3.1e-12 75.9 55 74.5
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 3.1e-12 75.9 153 77.8
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 5.2e-12 75.1 50 72.0
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 6.8e-12 74.7 68 60.3
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 8.9e-12 74.3 61 67.2
HPP92_013978 Vanilla planifolia HOM05D007144 ORTHO05D008709 8.9e-12 74.3 67 56.7
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 1.2e-11 73.9 68 66.2
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 1.2e-11 73.9 67 61.2
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 3.4e-11 72.4 59 66.1
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 5.8e-11 71.6 67 61.2
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 5.8e-11 71.6 67 61.2
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 5.8e-11 71.6 67 61.2
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 5.8e-11 71.6 67 61.2
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 5.8e-11 71.6 51 76.5
PGR102G1924 Punica granatum HOM05D007144 ORTHO05D008709 2.9e-10 69.3 58 60.3
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 4.9e-10 68.6 52 69.2
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 4.9e-10 68.6 68 58.8
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 6.4e-10 68.2 57 63.2
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 5.4e-09 65.1 43 76.7
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 1.6e-08 63.5 83 48.2
Mapoly0026s0092 Marchantia polymorpha HOM05D007144 ORTHO05D008709 6.0e-08 61.6 50 60.0
Lj1A285T18 Lonicera japonica HOM05D007144 ORTHO05D008709 1.1e-06 57.4 32 87.5
Phvul.006G021300 Phaseolus vulgaris HOM05D007144 ORTHO05D008709 3.3e-06 55.8 36 66.7
Pp3c2_27120 Physcomitrium patens HOM05D007144 ORTHO05D008709 5.6e-06 55.1 47 59.6
CBR_g48945 Chara braunii HOM05D007144 ORTHO05D008709 9.6e-06 54.3 48 56.2


User provided reference genes

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