Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 8.3e-249 863.2 429 100.0
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 9.4e-176 620.5 429 70.4
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 3.8e-169 598.6 427 68.6
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.5e-168 595.9 421 67.7
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 1.5e-165 586.6 479 65.1
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 2.6e-165 585.9 418 69.1
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 1.4e-163 580.1 421 67.7
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 3.1e-163 578.9 425 66.6
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 2.6e-162 575.9 443 67.9
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 1.0e-161 573.9 424 65.8
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 1.7e-161 573.2 443 65.0
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 2.5e-160 569.3 421 64.6
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 5.5e-160 568.2 425 66.8
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 1.8e-158 563.1 421 64.1
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 5.2e-158 561.6 539 56.0
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 3.7e-156 555.4 420 64.5
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 1.4e-155 553.5 424 64.6
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 2.4e-155 552.7 426 64.6
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 5.3e-155 551.6 420 64.0
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 1.6e-154 550.1 428 64.3
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 4.5e-154 548.5 416 66.3
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 7.7e-154 547.7 427 63.0
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 1.0e-153 547.4 422 66.1
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 3.8e-153 545.4 429 66.2
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 8.5e-153 544.3 420 64.0
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 8.5e-153 544.3 422 65.9
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 8.5e-153 544.3 408 65.7
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 5.5e-152 541.6 428 65.0
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 2.7e-151 539.3 414 65.0
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 8.0e-151 537.7 430 64.9
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 1.4e-150 537.0 421 64.1
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 2.3e-150 536.2 418 65.3
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 6.8e-150 534.6 422 61.4
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 3.4e-149 532.3 422 64.0
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 9.8e-149 530.8 432 64.6
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 1.3e-148 530.4 445 61.8
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 4.1e-147 525.4 424 64.9
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 9.1e-147 524.2 429 60.4
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 1.6e-146 523.5 452 60.4
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 1.6e-146 523.5 452 60.4
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 2.7e-146 522.7 419 59.4
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 2.7e-146 522.7 425 62.1
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 3.5e-146 522.3 422 61.4
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.1e-144 517.3 378 66.4
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 3.3e-144 515.8 432 63.2
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 5.5e-144 515.0 429 60.6
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 1.4e-139 500.4 427 61.1
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 3.1e-139 499.2 440 58.9
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 4.1e-139 498.8 430 58.1
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.2e-138 497.3 430 60.5
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 1.2e-138 497.3 428 56.5
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 2.0e-138 496.5 425 58.8
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 3.5e-138 495.7 428 59.6
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 8.6e-137 491.1 418 58.6
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 1.1e-136 490.7 426 57.3
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 1.1e-136 490.7 432 57.6
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 7.3e-136 488.0 422 58.5
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 2.6e-133 479.6 419 56.1
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 9.8e-133 477.6 419 56.1
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 1.3e-132 477.2 419 56.6
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 1.9e-131 473.4 418 58.4
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 3.2e-131 472.6 467 52.7
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 3.2e-131 472.6 420 58.1
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 5.4e-131 471.9 379 62.0
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 7.0e-131 471.5 431 55.9
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 1.2e-130 470.7 421 58.9
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 4.6e-130 468.8 417 55.2
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 7.8e-130 468.0 420 55.0
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 1.3e-129 467.2 422 55.0
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 1.7e-129 466.8 420 55.0
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 1.7e-129 466.8 328 68.3
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 1.1e-128 464.2 435 53.6
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 1.6e-127 460.3 426 52.8
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 4.7e-127 458.8 420 54.8
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 1.4e-126 457.2 380 61.8
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 4.0e-126 455.7 421 54.6
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.5e-125 453.8 430 56.7
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 1.4e-123 447.2 426 52.3
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 3.0e-121 439.5 411 55.0
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 9.9e-117 424.5 446 51.6
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 4.9e-116 422.2 336 59.8
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 1.9e-115 420.2 404 55.9
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.5e-112 409.8 433 51.0
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 7.3e-112 408.3 380 55.3
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 6.2e-111 405.2 337 60.2
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 2.6e-109 399.8 456 48.2
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 1.9e-107 393.7 351 57.5
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 4.6e-106 389.0 430 48.1
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 3.9e-105 386.0 356 60.4
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.7e-100 370.5 370 54.6
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 5.4e-99 365.5 291 63.2
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 3.6e-95 352.8 426 43.9
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 7.6e-93 345.1 341 57.2
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 3.5e-90 336.3 403 44.9
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 3.5e-90 336.3 451 43.7
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 9.6e-88 328.2 425 43.1
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 8.7e-81 305.1 351 46.7
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 2.5e-80 303.5 291 49.8
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 5.7e-64 249.2 161 69.6
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 9.7e-64 248.4 230 63.9
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 1.7e-55 221.1 194 52.6
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 1.5e-53 214.5 236 51.7
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 4.2e-51 206.5 392 32.4
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.0e-49 201.8 162 67.9
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 5.3e-46 189.5 225 45.3
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 4.1e-38 163.3 162 59.9
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.2e-24 118.6 164 45.1
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 2.0e-24 117.9 82 67.1
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 2.4e-14 84.3 64 57.8
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 4.6e-13 80.1 92 58.7
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 6.6e-12 76.3 53 71.7
Prupe.1G388100 Prunus persica HOM05D000823 ORTHO05D000088 3.4e-08 63.9 51 60.8


User provided reference genes

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