Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000680 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 4.4e-59 231.1 119 100.0
Dinv18559 Davidia involucrata HOM05D007156 ORTHO05D003871 1.1e-33 146.7 110 70.9
Hma1.2p1_0712F.1_g207550 Hydrangea macrophylla HOM05D007156 ORTHO05D003871 5.7e-30 134.4 129 60.5
Cfa014479 Carpinus fangiana HOM05D007156 ORTHO05D003871 2.1e-24 115.9 125 58.4
Haze_12992 Corylus avellana HOM05D007156 ORTHO05D003871 1.8e-23 112.8 121 59.5
CSS0043735 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 1.3e-21 106.7 130 54.6
Cpa.g.sc34.47 Carica papaya HOM05D007156 ORTHO05D003871 1.6e-21 106.3 116 57.8
QL08p034497 Quercus lobata HOM05D007156 ORTHO05D003871 2.2e-21 105.9 121 58.7
Thecc.02G165500 Theobroma cacao HOM05D007156 ORTHO05D003871 2.2e-21 105.9 117 55.6
CiPaw.03G165400 Carya illinoinensis HOM05D007156 ORTHO05D003871 3.7e-21 105.1 126 54.8
COL.COLO4_13040 Corchorus olitorius HOM05D007156 ORTHO05D003871 8.2e-21 104.0 113 57.5
Rhsim06G0154900 Rhododendron simsii HOM05D007156 ORTHO05D003871 2.4e-20 102.4 136 52.2
TAR271G0004 Trochodendron aralioides HOM05D007156 ORTHO05D003871 2.4e-20 102.4 120 52.5
Ciclev10017232m.g Citrus clementina HOM05D007156 ORTHO05D003871 4.1e-20 101.7 128 54.7
Glyma.06G301200 Glycine max HOM05D007156 ORTHO05D003871 4.1e-20 101.7 128 52.3
CiPaw.04G120100 Carya illinoinensis HOM05D007156 ORTHO05D003871 6.9e-20 100.9 119 56.3
Manes.12G077701 Manihot esculenta HOM05D007156 ORTHO05D003871 2.0e-19 99.4 118 55.1
Glyma.13G304200 Glycine max HOM05D007156 ORTHO05D003871 2.6e-19 99.0 117 50.4
Phvul.011G107900 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 5.9e-19 97.8 125 48.8
Lj3g0000666 Lotus japonicus HOM05D007156 ORTHO05D003871 7.7e-19 97.4 121 46.3
Potri.019G125100 Populus trichocarpa HOM05D007156 ORTHO05D003871 1.0e-18 97.1 116 52.6
Gorai.012G132600 Gossypium raimondii HOM05D007156 ORTHO05D003871 1.3e-18 96.7 120 52.5
Sed0007405 Sechium edule HOM05D007156 ORTHO05D003871 1.3e-18 96.7 115 52.2
Atru.chr6.3108 Acer truncatum HOM05D007156 ORTHO05D003871 1.7e-18 96.3 116 56.0
VMungo1127G0041 Vigna mungo HOM05D007156 ORTHO05D003871 2.2e-18 95.9 125 49.6
Glyma.12G103200 Glycine max HOM05D007156 ORTHO05D003871 5.0e-18 94.7 128 50.8
Potri.013G152300 Populus trichocarpa HOM05D007156 ORTHO05D003871 5.0e-18 94.7 116 49.1
Prupe.3G223500 Prunus persica HOM05D007156 ORTHO05D003871 5.0e-18 94.7 124 53.2
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.4e-17 93.2 123 45.5
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.4e-17 93.2 123 45.5
Gohir.A04G106700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 3.2e-17 92.0 120 50.8
Psat7g163320 Pisum sativum HOM05D007156 ORTHO05D003871 4.2e-17 91.7 126 46.8
Sabra19G0123400 Salix brachista HOM05D007156 ORTHO05D003871 4.2e-17 91.7 116 50.9
Migut.M00380 Erythranthe guttata HOM05D007156 ORTHO05D003871 5.5e-17 91.3 129 47.3
Actinidia12482 Actinidia chinensis HOM05D007156 ORTHO05D003871 1.6e-16 89.7 65 76.9
MBI18_g20355_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.6e-16 89.7 123 44.7
Dinv13866 Davidia involucrata HOM05D039772 ORTHO05D003871 2.1e-16 89.4 111 50.5
FAN05G2387 Fragaria x ananassa HOM05D007156 ORTHO05D003871 2.1e-16 89.4 115 54.8
RcHm_v2.0_Chr2g0160641 Rosa chinensis HOM05D007156 ORTHO05D003871 2.1e-16 89.4 124 53.2
FAN09G0550 Fragaria x ananassa HOM05D007156 ORTHO05D003871 2.7e-16 89.0 112 54.5
Gohir.D02G185700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 2.7e-16 89.0 118 50.8
Gorai.005G208200 Gossypium raimondii HOM05D007156 ORTHO05D003871 2.7e-16 89.0 118 50.8
MBI02_g42365_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.7e-16 89.0 122 45.9
MBI02_g43089_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.7e-16 89.0 122 45.9
Medtr0945s0020 Medicago truncatula HOM05D007156 ORTHO05D003871 2.7e-16 89.0 115 47.8
Sabra13G0122400 Salix brachista HOM05D007156 ORTHO05D003871 3.6e-16 88.6 116 48.3
VMungo1080G0311 Vigna mungo HOM05D007156 ORTHO05D003871 3.6e-16 88.6 121 44.6
FAN02G1242 Fragaria x ananassa HOM05D007156 ORTHO05D003871 4.6e-16 88.2 115 53.9
TPR.G19047 Trifolium pratense HOM05D007156 ORTHO05D003871 4.6e-16 88.2 100 53.0
Phvul.005G111100 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 6.1e-16 87.8 127 45.7
Sabra19G0131200 Salix brachista HOM05D007156 ORTHO05D003871 1.4e-15 86.7 49 79.6
Gohir.A03G162600 Gossypium hirsutum HOM05D007156 ORTHO05D003871 1.8e-15 86.3 118 49.2
FvH4_6g43890 Fragaria vesca HOM05D007156 ORTHO05D003871 6.7e-15 84.3 115 53.0
FAN14G5947 Fragaria x ananassa HOM05D007156 ORTHO05D003871 6.7e-15 84.3 115 53.0
Solyc12g005690.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 6.7e-15 84.3 131 42.7
ClCG02G001520 Citrullus lanatus HOM05D007156 ORTHO05D003871 8.8e-15 84.0 114 47.4
Nitab4.5_0009996g0020 Nicotiana tabacum HOM05D007156 ORTHO05D003871 1.1e-14 83.6 126 50.8
MD09G1102100 Malus domestica HOM05D007156 ORTHO05D003871 2.5e-14 82.4 114 48.2
Nitab4.5_0001302g0030 Nicotiana tabacum HOM05D007156 ORTHO05D003871 2.5e-14 82.4 129 47.3
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 7.4e-14 80.9 71 62.0
Lalb_Chr24g0393601 Lupinus albus HOM05D007156 ORTHO05D003871 7.4e-14 80.9 108 44.4
MD09G1127500 Malus domestica HOM05D007156 ORTHO05D003871 7.4e-14 80.9 119 47.1
Psat5g266920 Pisum sativum HOM05D007156 ORTHO05D003871 9.7e-14 80.5 49 71.4
CAN.G86.35 Capsicum annuum HOM05D007156 ORTHO05D003871 1.3e-13 80.1 127 47.2
MSTRG.6540 Avicennia marina HOM05D007156 ORTHO05D003871 1.7e-13 79.7 87 52.9
unitig_746.g26730 Utricularia gibba HOM05D007156 ORTHO05D003871 2.2e-13 79.3 117 44.4
Sopen07g026540 Solanum pennellii HOM05D007156 ORTHO05D003871 3.7e-13 78.6 119 47.9
Solyc07g052990.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 8.2e-13 77.4 77 61.0
CSS0048777 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 1.4e-12 76.6 118 39.0
TPR.G18057 Trifolium pratense HOM05D007156 ORTHO05D003871 1.4e-12 76.6 115 46.1
Ca_01559_v3 Cicer arietinum L. HOM05D007156 ORTHO05D003871 3.1e-12 75.5 54 64.8
CsaV3_7G003930 Cucumis sativus L. HOM05D007156 ORTHO05D003871 3.1e-12 75.5 105 47.6
Peaxi162Scf00012g00273 Petunia axillaris HOM05D007156 ORTHO05D003871 3.1e-12 75.5 123 45.5
Lj3g0015957 Lotus japonicus HOM05D007156 ORTHO05D003871 5.3e-12 74.7 120 47.5
PGSC0003DMG400013754 Solanum tuberosum HOM05D007156 ORTHO05D003871 1.2e-11 73.6 58 69.0
Dinv10890 Davidia involucrata HOM05D039772 ORTHO05D178898 1.5e-11 73.2 95 48.4
Nn1g06910 Nelumbo nucifera HOM05D007156 ORTHO05D003871 2.0e-11 72.8 125 36.8
Nn2g11286 Nelumbo nucifera HOM05D007156 ORTHO05D003871 2.0e-11 72.8 159 33.3
Eucgr.A01740 Eucalyptus grandis HOM05D007156 ORTHO05D003871 2.6e-11 72.4 125 44.8
Nn1g03759 Nelumbo nucifera HOM05D007156 ORTHO05D003871 3.4e-11 72.0 121 38.8
ATR0804G053 Amborella trichopoda HOM05D007156 ORTHO05D003871 5.9e-11 71.2 69 53.6
Dinv17859 Davidia involucrata HOM05D001601 ORTHO05D006936 5.9e-11 71.2 100 42.0
TAR633G1059 Trochodendron aralioides HOM05D007866 ORTHO05D003871 1.3e-10 70.1 145 37.9
unitig_899.g15247 Utricularia gibba HOM05D007156 ORTHO05D003871 1.3e-10 70.1 73 53.4
PGSC0003DMG400026188 Solanum tuberosum HOM05D007156 ORTHO05D003871 2.2e-10 69.3 112 43.8
Gohir.D01G209950 Gossypium hirsutum HOM05D007866 ORTHO05D003871 3.8e-10 68.6 126 38.9
MBI18_g38397_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 3.8e-10 68.6 61 62.3
Sed0001937 Sechium edule HOM05D007156 ORTHO05D003871 5.0e-10 68.2 104 46.2
Gorai.002G255600 Gossypium raimondii HOM05D007866 ORTHO05D003871 6.5e-10 67.8 126 38.9
Dinv18957 Davidia involucrata HOM05D007156 ORTHO05D003871 1.1e-09 67.0 58 56.9
Gohir.A01G221050 Gossypium hirsutum HOM05D007866 ORTHO05D003871 1.4e-09 66.6 126 37.3
SGA_v2.0_scaffold70G23435 Striga asiatica HOM05D007156 ORTHO05D003871 1.4e-09 66.6 117 39.3
Oeu030552.1 Olea europaea HOM05D007866 ORTHO05D003871 2.5e-09 65.9 142 38.7
ClCG02G011170 Citrullus lanatus HOM05D007156 ORTHO05D003871 3.2e-09 65.5 109 43.1
Peaxi162Scf00007g00157 Petunia axillaris HOM05D007156 ORTHO05D003871 3.2e-09 65.5 63 63.5
Sed0003235 Sechium edule HOM05D007156 ORTHO05D003871 3.2e-09 65.5 111 43.2
Thecc.06G206300 Theobroma cacao HOM05D001601 ORTHO05D006936 3.2e-09 65.5 107 43.0
Ciclev10013493m.g Citrus clementina HOM05D007866 ORTHO05D003871 5.5e-09 64.7 138 33.3
Prupe.6G264300 Prunus persica HOM05D007866 ORTHO05D003871 7.2e-09 64.3 98 46.9
Duzib160G0418 Durio zibethinus HOM05D001601 ORTHO05D006936 9.4e-09 63.9 46 60.9
CiPaw.09G201000 Carya illinoinensis HOM05D007866 ORTHO05D003871 1.6e-08 63.2 72 48.6
Nitab4.5_0000362g0160 Nicotiana tabacum HOM05D007866 ORTHO05D003871 2.7e-08 62.4 49 59.2
RcHm_v2.0_Chr3g0464671 Rosa chinensis HOM05D007866 ORTHO05D003871 2.7e-08 62.4 116 37.9
CsaV3_6G012600 Cucumis sativus L. HOM05D007156 ORTHO05D003871 3.6e-08 62.0 55 61.8
Ca_26200_v3 Cicer arietinum L. HOM05D007156 ORTHO05D003871 4.7e-08 61.6 98 43.9
Potri.004G029700 Populus trichocarpa HOM05D012748 ORTHO05D014783 4.7e-08 61.6 64 54.7
Rhsim02G0116500 Rhododendron simsii HOM05D007156 ORTHO05D003871 4.7e-08 61.6 89 41.6
Solyc09g011430.1 Solanum lycopersicum HOM05D007866 ORTHO05D003871 4.7e-08 61.6 64 53.1
Cc05_g05520 Coffea canephora HOM05D007156 ORTHO05D003871 7.9e-08 60.8 136 35.3
Lj3g0011949 Lotus japonicus HOM05D007866 ORTHO05D003871 7.9e-08 60.8 39 66.7
THA.LOC104816660 Tarenaya hassleriana HOM05D007866 ORTHO05D003871 7.9e-08 60.8 68 47.1
Atru.chr8.2088 Acer truncatum HOM05D007866 ORTHO05D003871 1.0e-07 60.5 138 31.9
CSS0047873 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 1.0e-07 60.5 132 34.1
MD12G1154500 Malus domestica HOM05D007866 ORTHO05D003871 1.0e-07 60.5 81 43.2
CSS0008619 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 1.4e-07 60.1 40 70.0
Haze_20881 Corylus avellana HOM05D007866 ORTHO05D003871 1.4e-07 60.1 150 34.0
Haze_20890 Corylus avellana HOM05D007866 ORTHO05D003871 1.4e-07 60.1 150 34.0
Medtr2g089190 Medicago truncatula HOM05D007156 ORTHO05D003871 1.4e-07 60.1 66 48.5
Rhsim05G0199600 Rhododendron simsii HOM05D007866 ORTHO05D003871 1.4e-07 60.1 65 52.3
Lsat_1_v5_gn_8_130461 Lactuca sativa HOM05D025642 ORTHO05D003871 1.8e-07 59.7 112 39.3
Peaxi162Scf00014g00168 Petunia axillaris HOM05D007866 ORTHO05D003871 1.8e-07 59.7 55 52.7
PGSC0003DMG400021719 Solanum tuberosum HOM05D001601 ORTHO05D006936 1.8e-07 59.7 47 51.1
SalBow4G1352 Salvia bowleyana HOM05D007866 ORTHO05D003871 2.3e-07 59.3 69 46.4
PGSC0003DMG400037339 Solanum tuberosum HOM05D007866 ORTHO05D003871 2.3e-07 59.3 65 49.2
BcaB04g18538 Brassica carinata HOM05D007866 ORTHO05D003871 3.0e-07 58.9 108 40.7
BcaB04g18539 Brassica carinata HOM05D007866 ORTHO05D003871 3.0e-07 58.9 108 40.7
Os07g0549100 Oryza sativa ssp. japonica HOM05D052182 ORTHO05D003871 3.0e-07 58.9 43 65.1
Sed0027672 Sechium edule HOM05D007866 ORTHO05D003871 3.0e-07 58.9 128 36.7
Sopen09g006160 Solanum pennellii HOM05D007866 ORTHO05D003871 3.0e-07 58.9 65 47.7
BraA03t12778Z Brassica rapa HOM05D007866 ORTHO05D003871 3.9e-07 58.5 70 48.6
Lalb_Chr07g0193271 Lupinus albus HOM05D007866 ORTHO05D003871 3.9e-07 58.5 39 61.5
Rhsim13G0163300 Rhododendron simsii HOM05D007156 ORTHO05D003871 3.9e-07 58.5 114 36.0
Sopen02g024570 Solanum pennellii HOM05D007156 ORTHO05D003871 3.9e-07 58.5 47 53.2
Nitab4.5_0001134g0060 Nicotiana tabacum HOM05D007156 ORTHO05D003871 5.1e-07 58.2 73 50.7
Sabra16G0103600 Salix brachista HOM05D007866 ORTHO05D003871 5.1e-07 58.2 59 50.8
Sp3g07650 Schrenkiella parvula HOM05D007866 ORTHO05D003871 5.1e-07 58.2 67 46.3
CSS0026310 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 6.7e-07 57.8 54 46.3
CsaV3_4G025580 Cucumis sativus L. HOM05D007866 ORTHO05D003871 6.7e-07 57.8 74 41.9
FvH4_6g12750 Fragaria vesca HOM05D007866 ORTHO05D003871 6.7e-07 57.8 117 33.3
FAN09G3925 Fragaria x ananassa HOM05D007866 ORTHO05D003871 6.7e-07 57.8 112 34.8
FAN14G2102 Fragaria x ananassa HOM05D007866 ORTHO05D003871 6.7e-07 57.8 117 33.3
QL07p028342 Quercus lobata HOM05D007866 ORTHO05D003871 6.7e-07 57.8 84 40.5
COL.COLO4_14698 Corchorus olitorius HOM05D007866 ORTHO05D003871 8.8e-07 57.4 95 36.8
Gohir.A09G152500 Gossypium hirsutum HOM05D007866 ORTHO05D003871 8.8e-07 57.4 99 40.4
EL10Ac7g16230 Beta vulgaris HOM05D007866 ORTHO05D003871 1.1e-06 57.0 35 71.4
C03p43730 Brassica napus HOM05D007866 ORTHO05D003871 1.1e-06 57.0 60 51.7
Manes.09G098200 Manihot esculenta HOM05D007866 ORTHO05D003871 1.1e-06 57.0 64 51.6
Nitab4.5_0005140g0010 Nicotiana tabacum HOM05D007156 ORTHO05D003871 1.1e-06 57.0 36 66.7
AL70U10030 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 1.5e-06 56.6 71 46.5
Nitab4.5_0008116g0010 Nicotiana tabacum HOM05D007866 ORTHO05D003871 1.5e-06 56.6 86 34.9
COL.COLO4_31669 Corchorus olitorius HOM05D007156 ORTHO05D014783 2.0e-06 56.2 112 39.3
MELO3C003184.2 Cucumis melo HOM05D007866 ORTHO05D003871 2.0e-06 56.2 81 43.2
Thhalv10021969m.g Eutrema salsugineum HOM05D007866 ORTHO05D003871 2.0e-06 56.2 98 40.8
Oeu041272.1 Olea europaea HOM05D007156 ORTHO05D003871 2.0e-06 56.2 116 37.9
Solyc02g079800.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 2.0e-06 56.2 47 51.1
AL3G20400 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 2.6e-06 55.8 71 45.1
Carub.0003s0839 Capsella rubella HOM05D007866 ORTHO05D003871 2.6e-06 55.8 68 47.1
unitig_744.g24528 Utricularia gibba HOM05D004209 ORTHO05D004970 2.6e-06 55.8 42 54.8
BcaC01g04222 Brassica carinata HOM05D007866 ORTHO05D003871 3.3e-06 55.5 70 47.1
CARHR083640 Cardamine hirsuta HOM05D007866 ORTHO05D003871 3.3e-06 55.5 54 53.7
Duzib128G0987 Durio zibethinus HOM05D007866 ORTHO05D003871 3.3e-06 55.5 66 47.0
TAR633G1409 Trochodendron aralioides HOM05D007866 ORTHO05D003871 3.3e-06 55.5 41 58.5
AT3G09280 Arabidopsis thaliana HOM05D007866 ORTHO05D003871 4.4e-06 55.1 71 45.1
Potri.006G092200 Populus trichocarpa HOM05D007866 ORTHO05D003871 4.4e-06 55.1 97 34.0
ECA246G1369 Erigeron canadensis HOM05D025642 ORTHO05D045214 7.4e-06 54.3 126 38.9
FAN05G4429 Fragaria x ananassa HOM05D007866 ORTHO05D003871 7.4e-06 54.3 113 34.5
Aqoxy4G02532 Aquilegia oxysepala HOM05D007156 ORTHO05D003871 9.7e-06 53.9 128 33.6
Eucgr.B02728 Eucalyptus grandis HOM05D007866 ORTHO05D003871 9.7e-06 53.9 75 42.7
Gorai.006G169200 Gossypium raimondii HOM05D007866 ORTHO05D003871 9.7e-06 53.9 99 38.4


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