Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-104 382.5 204 100.0
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.9e-103 378.3 204 98.0
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.7e-96 355.5 202 93.1
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.9e-90 334.7 205 84.4
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.9e-90 334.7 204 87.3
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.4e-75 285.4 205 76.1
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-74 283.1 205 75.6
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.4e-74 281.2 205 76.6
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.3e-70 267.7 204 67.6
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-69 266.9 194 74.2
CSS0015212 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.6e-59 232.6 205 68.3
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.9e-58 229.2 204 66.2
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-51 207.2 203 56.7
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.3e-49 197.6 126 81.7
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.4e-46 188.0 209 54.1
CSS0014991 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.3e-45 184.9 143 73.4
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-38 164.1 112 70.5
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-36 157.5 205 47.8
CSS0009699 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-25 120.6 197 44.2
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 2.5e-25 119.8 187 44.4
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 1.1e-20 104.4 182 40.7
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 2.7e-16 89.7 140 43.6
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 3.0e-15 86.3 130 39.2
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 5.2e-15 85.5 136 36.0
Rhsim02G0175700 Rhododendron simsii HOM05D008623 ORTHO05D007789 6.7e-15 85.1 158 39.2
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 1.2e-14 84.3 128 42.2
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 2.0e-14 83.6 125 39.2
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 4.4e-14 82.4 137 37.2
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 5.7e-14 82.0 148 39.9
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 7.5e-14 81.6 119 39.5
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 1.3e-13 80.9 136 35.3
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 1.7e-13 80.5 128 36.7
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 3.7e-13 79.3 119 38.7
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 8.2e-13 78.2 128 39.8
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 1.2e-11 74.3 100 42.0
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.5e-11 72.8 131 30.5
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 5.9e-11 72.0 114 37.7
Dinv36278 Davidia involucrata HOM05D000519 ORTHO05D001210 7.7e-11 71.6 119 37.0
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.0e-10 71.2 128 40.6
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 1.0e-10 71.2 138 38.4
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.3e-10 70.9 122 37.7
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.2e-10 70.1 203 30.5
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.2e-10 70.1 203 30.5
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.9e-10 69.7 131 37.4
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.9e-10 69.7 131 36.6
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.9e-10 69.7 136 32.4
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.5e-10 68.6 131 37.4
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.5e-10 68.6 124 37.9
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 6.5e-10 68.6 139 36.0
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 8.5e-10 68.2 134 34.3
Lj1A777T20 Lonicera japonica HOM05D011954 ORTHO05D014236 1.5e-09 67.4 136 35.3
Lj1A773T40 Lonicera japonica HOM05D011954 ORTHO05D014236 1.9e-09 67.0 136 34.6
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.5e-09 66.6 106 36.8
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 3.2e-09 66.2 143 31.5
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.2e-09 66.2 117 36.8
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 7.2e-09 65.1 121 34.7
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 7.2e-09 65.1 179 26.8
Peaxi162Scf00045g00629 Petunia axillaris HOM05D010354 ORTHO05D012840 7.2e-09 65.1 137 37.2
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 9.4e-09 64.7 136 33.8
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.2e-08 64.3 122 35.2
PGSC0003DMG400006632 Solanum tuberosum HOM05D010354 ORTHO05D012840 2.7e-08 63.2 147 34.0
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 4.7e-08 62.4 129 36.4
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 4.7e-08 62.4 111 36.0
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 6.1e-08 62.0 130 37.7
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.1e-08 62.0 110 33.6
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 6.1e-08 62.0 108 36.1
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 6.1e-08 62.0 108 36.1
Nitab4.5_0000043g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 8.0e-08 61.6 171 27.5
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 8.0e-08 61.6 121 32.2
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 8.0e-08 61.6 118 33.1
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 8.0e-08 61.6 108 31.5
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.0e-07 61.2 126 34.9
Sed0024472 Sechium edule HOM05D034586 ORTHO05D007789 1.0e-07 61.2 141 37.6
Nitab4.5_0000559g0160 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.4e-07 60.8 89 37.1
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 1.4e-07 60.8 89 39.3
COL.COLO4_08085 Corchorus olitorius HOM05D016489 ORTHO05D007789 1.8e-07 60.5 121 35.5
Cc02_g13970 Coffea canephora HOM05D039367 ORTHO05D010647 2.3e-07 60.1 118 33.1
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 2.3e-07 60.1 121 29.8
Rhsim13G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.3e-07 60.1 58 51.7
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 3.0e-07 59.7 125 35.2
Nitab4.5_0002593g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 3.0e-07 59.7 154 33.1
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 3.0e-07 59.7 131 33.6
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 5.2e-07 58.9 112 33.9
arahy.Tifrunner.gnm1.ann1.JW8DXZ Arachis hypogaea HOM05D010841 ORTHO05D007789 6.8e-07 58.5 113 32.7
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 6.8e-07 58.5 141 30.5
arahy.Tifrunner.gnm1.ann1.J4CNX7 Arachis hypogaea HOM05D010841 ORTHO05D007789 8.8e-07 58.2 118 33.1
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 1.2e-06 57.8 111 33.3
Rhsim06G0038200 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.2e-06 57.8 123 30.9
arahy.Tifrunner.gnm1.ann1.82LERJ Arachis hypogaea HOM05D010841 ORTHO05D007789 1.5e-06 57.4 109 34.9
BolC4t28134H Brassica oleracea HOM05D002666 ORTHO05D004769 1.5e-06 57.4 118 34.7
Nitab4.5_0000078g0430 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.5e-06 57.4 101 35.6
Dinv25408 Davidia involucrata HOM05D000519 ORTHO05D035051 2.0e-06 57.0 104 31.7
Peaxi162Scf01013g00008 Petunia axillaris HOM05D008744 ORTHO05D010647 2.0e-06 57.0 105 31.4
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.0e-06 57.0 106 33.0
Dinv01174 Davidia involucrata HOM05D008623 ORTHO05D007789 2.6e-06 56.6 119 33.6
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.6e-06 56.6 137 38.0
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.6e-06 56.6 111 32.4
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 3.4e-06 56.2 89 33.7
PGSC0003DMG400007626 Solanum tuberosum HOM05D008744 ORTHO05D010647 3.4e-06 56.2 86 32.6
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 4.4e-06 55.8 106 35.8
Peaxi162Scf00700g00239 Petunia axillaris HOM05D008744 ORTHO05D010647 4.4e-06 55.8 117 32.5
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 7.5e-06 55.1 110 30.0
PGSC0003DMG401029222 Solanum tuberosum HOM05D008744 ORTHO05D010647 7.5e-06 55.1 86 32.6
vmacro01230 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 7.5e-06 55.1 130 31.5
BcaNung03124 Brassica carinata HOM05D002666 ORTHO05D004769 9.8e-06 54.7 129 34.9
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 9.8e-06 54.7 110 33.6
PGSC0003DMG400006633 Solanum tuberosum HOM05D010354 ORTHO05D012840 9.8e-06 54.7 141 30.5


User provided reference genes

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