Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000622 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 4.8e-271 937.2 451 100.0
CSS0029958 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 7.6e-261 903.3 451 96.7
CSS0027577 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 1.3e-172 610.1 463 70.6
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 4.6e-72 276.2 430 40.9
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 1.6e-69 267.7 430 38.6
vmacro07839 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 5.8e-67 259.2 458 38.4
Rhsim02G0133500 Rhododendron simsii HOM05D019272 ORTHO05D020252 3.4e-59 233.4 434 35.5
Rhsim06G0012900 Rhododendron simsii HOM05D011274 ORTHO05D012136 6.7e-15 86.3 245 28.2
vmacro10955 Vaccinium macrocarpon HOM05D011274 ORTHO05D012136 6.7e-15 86.3 259 27.8
Rhsim02G0162400 Rhododendron simsii HOM05D015811 ORTHO05D014676 2.8e-13 80.9 323 26.6
Rhsim11G0054100 Rhododendron simsii HOM05D015811 ORTHO05D014676 6.3e-13 79.7 295 27.8
QL08p064279 Quercus lobata HOM05D011274 ORTHO05D012136 1.4e-12 78.6 367 24.5
Rhsim04G0227100 Rhododendron simsii HOM05D015811 ORTHO05D014676 2.4e-12 77.8 323 25.1
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 1.2e-11 75.5 252 26.2
QL08p063661 Quercus lobata HOM05D011274 ORTHO05D012136 1.2e-11 75.5 283 27.9
Rhsim02G0162000 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.2e-11 75.5 308 26.6
QL07p010851 Quercus lobata HOM05D011274 ORTHO05D012136 1.5e-11 75.1 255 25.5
Rhsim04G0226700 Rhododendron simsii HOM05D015811 ORTHO05D014676 2.6e-11 74.3 292 25.7
Rhsim06G0014500 Rhododendron simsii HOM05D000059 ORTHO05D012136 3.4e-11 73.9 241 26.6
QL07p010661 Quercus lobata HOM05D011274 ORTHO05D012136 5.9e-11 73.2 256 25.4
QL08p063682 Quercus lobata HOM05D011274 ORTHO05D012136 7.7e-11 72.8 283 27.2
QL10p018154 Quercus lobata HOM05D011274 ORTHO05D012136 2.9e-10 70.9 253 26.5
QL08p063692 Quercus lobata HOM05D011274 ORTHO05D012136 6.5e-10 69.7 272 26.5
Rhsim02G0161800 Rhododendron simsii HOM05D015811 ORTHO05D014676 5.5e-09 66.6 280 25.7
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 1.2e-08 65.5 198 30.3
Rhsim04G0226600 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.2e-08 65.5 289 25.6
RhsimUnG0050900 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.6e-08 65.1 294 25.5
Rhsim04G0226100 Rhododendron simsii HOM05D015811 ORTHO05D014676 2.7e-08 64.3 296 25.0
CSS0012204 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 1.1e-06 58.9 215 26.0
QL08p064561 Quercus lobata HOM05D011274 ORTHO05D012136 2.0e-06 58.2 203 26.6
QL12p011282 Quercus lobata HOM05D011274 ORTHO05D012136 2.0e-06 58.2 263 25.1
CSS0024213 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 2.5e-06 57.8 215 25.6
Lj2P199T12 Lonicera japonica HOM05D021051 ORTHO05D012833 4.3e-06 57.0 193 26.9
Ah.09g227600 Amaranthus hybridus HOM05D037678 ORTHO05D012136 7.4e-06 56.2 267 22.8


User provided reference genes

Program Settings