Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 0.0e+00 2062.0 1081 100.0
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 0.0e+00 1476.5 1067 76.1
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 0.0e+00 1441.0 1079 73.8
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 0.0e+00 1334.3 1095 68.4
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 0.0e+00 1305.8 1093 67.2
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 0.0e+00 1283.5 1082 66.8
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 0.0e+00 1281.2 1083 66.4
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1253.4 1082 65.6
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1249.6 1082 65.4
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 0.0e+00 1247.6 1092 63.1
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 0.0e+00 1244.2 1095 65.0
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 0.0e+00 1218.4 1084 63.1
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 0.0e+00 1216.8 1041 66.9
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 0.0e+00 1213.7 1098 61.7
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 0.0e+00 1209.9 1088 62.8
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 0.0e+00 1204.1 1094 63.2
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 0.0e+00 1199.5 1099 61.4
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1196.4 1099 61.3
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 0.0e+00 1193.7 1094 61.2
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 0.0e+00 1192.6 1105 61.9
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 0.0e+00 1191.0 1091 61.2
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1187.2 1087 61.8
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1183.3 1138 59.1
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 0.0e+00 1176.0 1092 61.1
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 0.0e+00 1172.5 1084 60.7
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1169.8 1127 59.4
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1167.5 1099 60.4
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 0.0e+00 1166.4 1097 60.8
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1165.2 1081 61.2
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1162.1 1092 61.4
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1160.6 1092 61.3
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 0.0e+00 1160.2 1092 60.1
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 0.0e+00 1158.7 1075 61.9
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 0.0e+00 1157.5 1093 62.1
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 0.0e+00 1155.2 1085 60.0
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 0.0e+00 1152.9 1088 60.5
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 0.0e+00 1150.2 1084 60.0
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 0.0e+00 1148.3 1094 62.1
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 0.0e+00 1147.5 1087 60.0
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 0.0e+00 1146.7 1122 58.4
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 0.0e+00 1146.3 1084 60.6
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 0.0e+00 1129.4 1089 59.4
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 0.0e+00 1128.2 1100 59.5
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 0.0e+00 1127.9 1100 59.0
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 0.0e+00 1125.2 1088 60.4
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 0.0e+00 1117.8 1094 58.0
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 0.0e+00 1115.5 1094 58.3
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 0.0e+00 1114.0 1080 59.4
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 0.0e+00 1105.5 1086 57.8
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 0.0e+00 1091.6 996 61.2
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 0.0e+00 1090.5 1085 57.4
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 0.0e+00 1085.1 1135 56.3
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 0.0e+00 1075.1 1093 57.3
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 8.9e-311 1070.5 1080 56.2
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 2.4e-308 1062.4 1111 55.7
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 4.4e-307 1058.1 1087 56.7
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 2.7e-304 1048.9 1084 56.1
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 5.6e-302 1041.2 1079 56.1
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 9.6e-302 1040.4 1129 53.5
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 1.2e-301 1040.0 1093 55.8
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 2.5e-294 1015.8 1095 54.1
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 4.3e-294 1015.0 1091 54.5
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 4.0e-292 1008.4 1082 56.0
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 1.7e-290 1003.0 1088 54.6
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 5.4e-289 998.0 1084 53.6
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 1.3e-287 993.4 970 57.2
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 1.1e-286 990.3 1096 53.8
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 4.3e-286 988.4 1089 53.9
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 2.8e-285 985.7 1084 54.4
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 2.6e-283 979.2 1097 53.9
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 1.9e-281 973.0 1083 54.2
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 2.4e-281 972.6 1053 55.5
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 3.5e-280 968.8 1098 53.6
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 2.5e-278 962.6 663 80.7
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 1.1e-276 957.2 1097 53.2
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 7.6e-275 951.0 1097 52.1
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 5.5e-273 944.9 1088 52.3
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 1.5e-270 936.8 1097 51.4
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 8.2e-269 931.0 1079 54.8
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 1.4e-255 887.1 1097 49.5
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 8.2e-245 851.3 1079 47.9
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 2.0e-243 846.7 1125 47.7
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 1.6e-235 820.5 1090 46.4
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 3.8e-226 789.3 1087 45.1
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 3.0e-215 753.1 636 65.7
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 9.2e-212 741.5 1002 46.2
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 3.8e-189 666.4 1019 43.8
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 7.3e-185 652.1 629 56.9
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 5.2e-183 646.0 653 58.0
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 2.2e-157 560.8 1170 36.4
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 1.8e-154 551.2 1066 38.1
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 1.6e-131 474.9 1071 37.2
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 1.8e-130 471.5 1184 33.5
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 9.1e-127 459.1 409 62.6
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 1.3e-117 428.7 445 60.2
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 8.0e-107 392.9 515 48.2
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 2.2e-104 384.8 412 52.4
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 6.8e-82 310.1 521 39.0
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 9.6e-68 263.1 1268 26.7
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 1.4e-63 249.2 409 38.1
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 6.2e-59 233.8 216 58.8
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 3.8e-40 171.4 270 42.6
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 5.0e-32 144.4 273 37.4
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 4.5e-25 121.3 103 58.3
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 5.9e-25 120.9 101 59.4
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 2.9e-24 118.6 91 62.6
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 6.5e-24 117.5 113 52.2
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 1.9e-23 115.9 107 58.9
TAR623G0866 Trochodendron aralioides HOM05D006963 ORTHO05D008783 7.2e-23 114.0 92 63.0
TAR629G2211 Trochodendron aralioides HOM05D002089 ORTHO05D022294 5.7e-12 77.8 84 51.2
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 4.2e-07 61.6 74 41.9
Cre07.g347700 Chlamydomonas reinhardtii HOM05D006963 ORTHO05D141144 2.7e-06 58.9 139 28.1


User provided reference genes

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