Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000599 Camellia sinensis var. sinensis HOM05D003943 ORTHO05D004753 3.8e-171 604.7 304 100.0
Lsat_1_v5_gn_6_32361 Lactuca sativa HOM05D003943 ORTHO05D004753 3.8e-139 498.4 265 93.2
Lsat_1_v5_gn_4_88760 Lactuca sativa HOM05D003943 ORTHO05D004753 8.5e-139 497.3 258 95.3
Actinidia38793 Actinidia chinensis HOM05D003943 ORTHO05D004753 2.5e-138 495.7 258 95.7
Oeu049654.1 Olea europaea HOM05D003943 ORTHO05D004753 2.5e-138 495.7 258 95.3
Dinv20358 Davidia involucrata HOM05D003943 ORTHO05D004753 5.5e-138 494.6 258 95.0
Actinidia21868 Actinidia chinensis HOM05D003943 ORTHO05D004753 7.2e-138 494.2 258 95.0
Oeu039454.1 Olea europaea HOM05D003943 ORTHO05D004753 7.2e-138 494.2 258 95.3
Atru.chr8.1362 Acer truncatum HOM05D003943 ORTHO05D004753 1.6e-137 493.0 258 95.3
Ciclev10012509m.g Citrus clementina HOM05D003943 ORTHO05D004753 2.1e-137 492.7 258 95.3
Lj6A21G25 Lonicera japonica HOM05D003943 ORTHO05D004753 4.7e-137 491.5 258 94.2
Lj6A3G40 Lonicera japonica HOM05D003943 ORTHO05D004753 4.7e-137 491.5 258 94.2
ClCG01G015010 Citrullus lanatus HOM05D003943 ORTHO05D004753 7.9e-137 490.7 258 95.3
TAR633G0404 Trochodendron aralioides HOM05D003943 ORTHO05D004753 7.9e-137 490.7 258 94.2
GSVIVG01011153001 Vitis vinifera HOM05D003943 ORTHO05D004753 7.9e-137 490.7 258 95.0
Atru.chr12.911 Acer truncatum HOM05D003943 ORTHO05D004753 1.0e-136 490.3 258 94.6
MSTRG.10894 Avicennia marina HOM05D003943 ORTHO05D004753 1.0e-136 490.3 258 94.6
CsaV3_6G041100 Cucumis sativus L. HOM05D003943 ORTHO05D004753 1.4e-136 490.0 258 95.3
Sed0023950 Sechium edule HOM05D003943 ORTHO05D004753 1.8e-136 489.6 258 94.6
Sopen09g036280 Solanum pennellii HOM05D003943 ORTHO05D004753 1.8e-136 489.6 258 95.3
MELO3C024586.2 Cucumis melo HOM05D003943 ORTHO05D004753 2.3e-136 489.2 261 94.3
Nn2g14305 Nelumbo nucifera HOM05D003943 ORTHO05D004753 2.3e-136 489.2 258 94.6
unitig_32.g11085 Utricularia gibba HOM05D003943 ORTHO05D004753 3.0e-136 488.8 258 94.2
TAR623G0676 Trochodendron aralioides HOM05D003943 ORTHO05D004753 3.9e-136 488.4 258 94.2
vmacro18760 Vaccinium macrocarpon HOM05D003943 ORTHO05D004753 3.9e-136 488.4 262 93.1
PGSC0003DMG400021625 Solanum tuberosum HOM05D003943 ORTHO05D004753 5.1e-136 488.0 258 95.0
CiPaw.10G017400 Carya illinoinensis HOM05D003943 ORTHO05D004753 6.7e-136 487.6 258 94.2
Rhsim08G0248000 Rhododendron simsii HOM05D003943 ORTHO05D004753 6.7e-136 487.6 261 92.3
Sed0024685 Sechium edule HOM05D003943 ORTHO05D004753 1.1e-135 486.9 258 93.8
Migut.I01176 Erythranthe guttata HOM05D003943 ORTHO05D004753 3.3e-135 485.3 258 93.0
HanXRQChr09g0277391 Helianthus annuus HOM05D003943 ORTHO05D004753 4.4e-135 485.0 258 93.8
Haze_03432 Corylus avellana HOM05D003943 ORTHO05D004753 7.4e-135 484.2 258 93.4
Haze_20185 Corylus avellana HOM05D003943 ORTHO05D004753 7.4e-135 484.2 258 93.4
Hma1.2p1_1104F.1_g257380 Hydrangea macrophylla HOM05D003943 ORTHO05D004753 7.4e-135 484.2 257 94.2
CDE10G1025 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 9.7e-135 483.8 258 93.8
HanXRQChr17g0533251 Helianthus annuus HOM05D003943 ORTHO05D004753 9.7e-135 483.8 258 93.4
TWI77G0554 Tripterygium wilfordii HOM05D003943 ORTHO05D004753 1.7e-134 483.0 258 93.8
PGR004G2105 Punica granatum HOM05D003943 ORTHO05D004753 2.2e-134 482.6 258 92.6
PGR142G4032 Punica granatum HOM05D003943 ORTHO05D004753 2.2e-134 482.6 258 92.6
QL07p036748 Quercus lobata HOM05D003943 ORTHO05D004753 2.2e-134 482.6 257 93.0
SalBow6G5742 Salvia bowleyana HOM05D003943 ORTHO05D004753 2.2e-134 482.6 258 92.6
Cc04_g00390 Coffea canephora HOM05D003943 ORTHO05D004753 4.8e-134 481.5 267 90.3
TWI74G1172 Tripterygium wilfordii HOM05D003943 ORTHO05D004753 4.8e-134 481.5 258 93.4
Eucgr.K02620 Eucalyptus grandis HOM05D003943 ORTHO05D004753 8.2e-134 480.7 258 92.6
CANSAT64G2459 Cannabis sativa HOM05D003943 ORTHO05D004753 1.1e-133 480.3 258 91.9
Manes.01G025400 Manihot esculenta HOM05D003943 ORTHO05D004753 1.1e-133 480.3 258 92.6
Manes.08G033500 Manihot esculenta HOM05D003943 ORTHO05D004753 2.4e-133 479.2 258 92.2
Cfa010504 Carpinus fangiana HOM05D003943 ORTHO05D004753 4.1e-133 478.4 258 91.9
Potri.006G203400 Populus trichocarpa HOM05D003943 ORTHO05D004753 5.3e-133 478.0 258 92.2
Prupe.4G241300 Prunus persica HOM05D003943 ORTHO05D004753 7.0e-133 477.6 258 91.5
Sabra16G0070600 Salix brachista HOM05D003943 ORTHO05D004753 9.1e-133 477.2 258 92.2
Sabra16G0072800 Salix brachista HOM05D003943 ORTHO05D004753 9.1e-133 477.2 258 92.2
THA.LOC104826802 Tarenaya hassleriana HOM05D003943 ORTHO05D004753 1.2e-132 476.9 258 92.6
Potri.016G070400 Populus trichocarpa HOM05D003943 ORTHO05D004753 1.5e-132 476.5 258 92.2
Hund10875 Selenicereus undatus HOM05D003943 ORTHO05D004753 1.5e-132 476.5 258 91.9
ATR0772G207 Amborella trichopoda HOM05D003943 ORTHO05D004753 2.0e-132 476.1 258 91.1
Glyma.02G196900 Glycine max HOM05D003943 ORTHO05D004753 2.6e-132 475.7 258 91.5
RcHm_v2.0_Chr2g0122251 Rosa chinensis HOM05D003943 ORTHO05D004753 2.6e-132 475.7 258 91.1
RcHm_v2.0_Chr4g0409741 Rosa chinensis HOM05D003943 ORTHO05D004753 2.6e-132 475.7 258 91.1
Gorai.002G235200 Gossypium raimondii HOM05D003943 ORTHO05D004753 3.5e-132 475.3 258 91.1
Cpa.g.sc104.32 Carica papaya HOM05D003943 ORTHO05D004753 4.5e-132 474.9 258 91.9
Lalb_Chr02g0144091 Lupinus albus HOM05D003943 ORTHO05D004753 4.5e-132 474.9 258 91.5
THA.LOC104809953 Tarenaya hassleriana HOM05D003943 ORTHO05D004753 4.5e-132 474.9 258 92.6
Aa31sc52G210 Aethionema arabicum HOM05D003943 ORTHO05D004753 5.9e-132 474.6 258 91.9
COL.COLO4_29575 Corchorus olitorius HOM05D003943 ORTHO05D004753 5.9e-132 474.6 258 92.6
Gohir.A09G134200 Gossypium hirsutum HOM05D003943 ORTHO05D004753 5.9e-132 474.6 258 91.1
Gorai.006G149400 Gossypium raimondii HOM05D003943 ORTHO05D004753 5.9e-132 474.6 258 91.1
FvH4_1g24730 Fragaria vesca HOM05D003943 ORTHO05D004753 7.7e-132 474.2 258 90.7
FvH4_1g24810 Fragaria vesca HOM05D003943 ORTHO05D004753 7.7e-132 474.2 258 90.7
FAN19G3070 Fragaria x ananassa HOM05D003943 ORTHO05D004753 7.7e-132 474.2 258 90.7
Phvul.007G268100 Phaseolus vulgaris HOM05D003943 ORTHO05D004753 7.7e-132 474.2 258 91.1
Glyma.10G081400 Glycine max HOM05D003943 ORTHO05D004753 1.0e-131 473.8 258 90.7
Gohir.D01G191300 Gossypium hirsutum HOM05D003943 ORTHO05D004753 1.0e-131 473.8 258 90.7
AT5G06360 Arabidopsis thaliana HOM05D003943 ORTHO05D004753 1.3e-131 473.4 258 91.9
Glyma.10G002300 Glycine max HOM05D003943 ORTHO05D004753 1.3e-131 473.4 258 90.7
Sp6g36490 Schrenkiella parvula HOM05D003943 ORTHO05D004753 1.3e-131 473.4 264 89.4
arahy.Tifrunner.gnm1.ann1.07MWYB Arachis hypogaea HOM05D003943 ORTHO05D004753 2.2e-131 472.6 258 90.7
arahy.Tifrunner.gnm1.ann1.T05T6P Arachis hypogaea HOM05D003943 ORTHO05D004753 2.2e-131 472.6 258 90.7
Lalb_Chr11g0067891 Lupinus albus HOM05D003943 ORTHO05D004753 2.2e-131 472.6 258 91.1
Phvul.010G103000 Phaseolus vulgaris HOM05D003943 ORTHO05D004753 2.9e-131 472.2 258 90.7
Gohir.A01G201400 Gossypium hirsutum HOM05D003943 ORTHO05D004753 3.8e-131 471.9 258 90.7
Peaxi162Scf00286g00330 Petunia axillaris HOM05D003943 ORTHO05D004753 3.8e-131 471.9 261 90.8
VMungo0331G0074 Vigna mungo HOM05D003943 ORTHO05D004753 5.0e-131 471.5 258 90.3
VMungo0720G1310 Vigna mungo HOM05D003943 ORTHO05D004753 5.0e-131 471.5 258 90.3
MD05G1235300 Malus domestica HOM05D003943 ORTHO05D004753 6.5e-131 471.1 258 90.3
Duzib093G1950 Durio zibethinus HOM05D003943 ORTHO05D004753 1.5e-130 469.9 258 90.7
ECA233G4676 Erigeron canadensis HOM05D003943 ORTHO05D004753 1.5e-130 469.9 258 90.7
Thecc.05G104300 Theobroma cacao HOM05D003943 ORTHO05D004753 1.5e-130 469.9 258 90.7
Nitab4.5_0008073g0030 Nicotiana tabacum HOM05D003943 ORTHO05D004753 2.5e-130 469.2 258 91.9
PSO384G4082 Papaver somniferum HOM05D003943 ORTHO05D004753 2.5e-130 469.2 258 89.1
PSO339G3654 Papaver somniferum HOM05D003943 ORTHO05D004753 4.2e-130 468.4 258 88.8
Lj1g0010263 Lotus japonicus HOM05D003943 ORTHO05D004753 1.2e-129 466.8 258 88.8
Ca_16636_v3 Cicer arietinum L. HOM05D003943 ORTHO05D004753 2.1e-129 466.1 258 90.3
C09p70420 Brassica napus HOM05D003943 ORTHO05D004753 2.7e-129 465.7 258 90.3
BolC9t59788H Brassica oleracea HOM05D003943 ORTHO05D004753 2.7e-129 465.7 258 90.3
MD10G1211300 Malus domestica HOM05D003943 ORTHO05D004753 2.7e-129 465.7 258 89.5
A10p30010 Brassica napus HOM05D003943 ORTHO05D004753 3.6e-129 465.3 258 90.3
BraA10t45041Z Brassica rapa HOM05D003943 ORTHO05D004753 3.6e-129 465.3 258 90.3
AL6G16440 Arabidopsis lyrata HOM05D003943 ORTHO05D004753 6.1e-129 464.5 258 90.7
CARHR207110 Cardamine hirsuta HOM05D003943 ORTHO05D004753 1.0e-128 463.8 258 88.8
C02p02670 Brassica napus HOM05D003943 ORTHO05D004753 1.8e-128 463.0 258 89.9
BolC2t06233H Brassica oleracea HOM05D003943 ORTHO05D004753 1.8e-128 463.0 258 89.9
HPP92_002146 Vanilla planifolia HOM05D003943 ORTHO05D004753 1.8e-128 463.0 253 90.1
BcaB05g21673 Brassica carinata HOM05D003943 ORTHO05D004753 2.3e-128 462.6 258 89.5
BcaC03g13169 Brassica carinata HOM05D003943 ORTHO05D004753 3.0e-128 462.2 258 89.5
Psat6g114680 Pisum sativum HOM05D003943 ORTHO05D004753 3.9e-128 461.8 258 88.4
BraA02t04878Z Brassica rapa HOM05D003943 ORTHO05D004753 5.2e-128 461.5 258 89.5
Sabra06G0156600 Salix brachista HOM05D003943 ORTHO05D004753 5.2e-128 461.5 282 84.0
Carub.0006s0525 Capsella rubella HOM05D003943 ORTHO05D004753 1.1e-127 460.3 258 90.3
Pp3c7_2280 Physcomitrium patens HOM05D003943 ORTHO05D004753 1.1e-127 460.3 258 87.2
Aqoxy1G00659 Aquilegia oxysepala HOM05D003943 ORTHO05D004753 1.5e-127 459.9 258 88.8
EL10Ac5g12966 Beta vulgaris HOM05D003943 ORTHO05D004753 2.6e-127 459.1 258 88.8
Mapoly0020s0123 Marchantia polymorpha HOM05D003943 ORTHO05D004753 4.4e-127 458.4 258 87.6
SGA_v2.0_scaffold71G24009 Striga asiatica HOM05D003943 ORTHO05D004753 4.4e-127 458.4 258 89.1
TPR.G5876 Trifolium pratense HOM05D003943 ORTHO05D004753 4.4e-127 458.4 258 89.1
AUR62036383 Chenopodium quinoa HOM05D003943 ORTHO05D004753 7.4e-127 457.6 258 88.4
Ca_11700_v3 Cicer arietinum L. HOM05D003943 ORTHO05D004753 7.4e-127 457.6 258 88.4
Thhalv10014439m.g Eutrema salsugineum HOM05D003943 ORTHO05D004753 2.2e-126 456.1 258 89.1
SMO367G0573 Selaginella moellendorffii HOM05D003943 ORTHO05D004753 3.7e-126 455.3 258 86.4
AagrBONN_evm.TU.Sc2ySwM_369.90 Anthoceros agrestis HOM05D003943 ORTHO05D004753 4.8e-126 454.9 258 86.4
FAN23G0735 Fragaria x ananassa HOM05D003943 ORTHO05D004753 6.3e-126 454.5 274 84.3
AUR62030745 Chenopodium quinoa HOM05D003943 ORTHO05D004753 9.1e-125 450.7 253 88.1
Ah.12g059190 Amaranthus hybridus HOM05D003943 ORTHO05D004753 1.6e-124 449.9 258 86.4
Medtr3g088865 Medicago truncatula HOM05D003943 ORTHO05D004753 2.0e-124 449.5 257 86.0
Medtr0508s0010 Medicago truncatula HOM05D003943 ORTHO05D004753 2.5e-122 442.6 258 85.7
CiPaw.09G020900 Carya illinoinensis HOM05D003943 ORTHO05D004753 3.2e-122 442.2 237 92.8
Lj2g0010046 Lotus japonicus HOM05D003943 ORTHO05D004753 3.2e-122 442.2 258 86.0
CBR_g12036 Chara braunii HOM05D003943 ORTHO05D004753 9.4e-122 440.7 258 82.9
TPR.G2813 Trifolium pratense HOM05D003943 ORTHO05D004753 8.0e-121 437.6 273 82.1
Os07g0673100 Oryza sativa ssp. japonica HOM05D003943 ORTHO05D004753 4.0e-120 435.3 258 84.9
FAN19G1372 Fragaria x ananassa HOM05D003943 ORTHO05D004753 2.6e-119 432.6 238 89.9
FAN28G2380 Fragaria x ananassa HOM05D003943 ORTHO05D004753 7.5e-119 431.0 238 89.5
Zm00001eb111290 Zea mays HOM05D003943 ORTHO05D004753 3.2e-114 415.6 258 81.0
Zm00001eb330440 Zea mays HOM05D003943 ORTHO05D004753 3.2e-114 415.6 258 81.0
PGSC0003DMG400029099 Solanum tuberosum HOM05D003943 ORTHO05D004753 1.2e-113 413.7 258 83.7
Dinv37798 Davidia involucrata HOM05D003943 ORTHO05D004753 1.6e-113 413.3 213 94.8
MCO03G138 Micromonas commoda HOM05D003943 ORTHO05D004753 2.1e-113 412.9 257 76.7
PRCOL_00000915 Prasinoderma coloniale HOM05D003943 ORTHO05D004753 8.0e-113 411.0 258 79.5
Gohir.D09G130700 Gossypium hirsutum HOM05D003943 ORTHO05D004753 1.8e-112 409.8 258 82.2
AagrBONN_evm.TU.Sc2ySwM_340.394 Anthoceros agrestis HOM05D003943 ORTHO05D004753 1.3e-110 403.7 263 79.1
Cre12.g507300 Chlamydomonas reinhardtii HOM05D003943 ORTHO05D004753 1.7e-110 403.3 257 77.4
Rhsim05G0206200 Rhododendron simsii HOM05D003943 ORTHO05D004753 3.7e-110 402.1 258 81.0
CAN.G710.48 Capsicum annuum HOM05D003943 ORTHO05D004753 1.0e-107 394.0 306 71.2
unitig_748.g7832 Utricularia gibba HOM05D003943 ORTHO05D004753 2.9e-107 392.5 201 95.5
Sc14g0006610 Simmondsia chinensis HOM05D003943 ORTHO05D004753 8.6e-107 391.0 219 89.5
FAN26G0481 Fragaria x ananassa HOM05D003943 ORTHO05D004753 4.2e-106 388.7 334 63.5
DCAR_016668 Daucus carota HOM05D003943 ORTHO05D004753 1.8e-104 383.3 251 78.1
DCAR_017903 Daucus carota HOM05D003943 ORTHO05D004753 3.0e-104 382.5 237 80.6
SEGI_04875 Sequoiadendron giganteum HOM05D003943 ORTHO05D004753 1.1e-101 374.0 195 91.3
Aa31LG3G5080 Aethionema arabicum HOM05D003943 ORTHO05D004753 1.6e-100 370.2 200 92.0
Nitab4.5_0003291g0080 Nicotiana tabacum HOM05D003943 ORTHO05D004753 8.3e-94 347.8 253 75.1
Haze_27191 Corylus avellana HOM05D003943 ORTHO05D004753 7.3e-90 334.7 256 65.6
FAN23G1436 Fragaria x ananassa HOM05D003943 ORTHO05D004753 1.1e-88 330.9 177 89.3
Peaxi162Scf01149g00220 Petunia axillaris HOM05D003943 ORTHO05D004753 6.6e-83 311.6 161 92.5
Cfa024104 Carpinus fangiana HOM05D003943 ORTHO05D123184 2.6e-71 273.1 229 59.4
TPR.G6300 Trifolium pratense HOM05D003943 ORTHO05D004753 3.2e-69 266.2 240 60.0
CDE10G0220 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 2.5e-58 229.9 113 97.3
CDE10G0110 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 9.6e-58 228.0 132 88.6
BcaC06g32370 Brassica carinata HOM05D003943 ORTHO05D004753 1.3e-57 227.6 140 85.0
BcaNung06320 Brassica carinata HOM05D003943 ORTHO05D004753 8.1e-57 224.9 140 84.3
SHI12410 Sapria himalayana HOM05D003943 ORTHO05D004753 7.4e-50 201.8 98 95.9
Lsat_1_v5_gn_8_162181 Lactuca sativa HOM05D003943 ORTHO05D004753 8.4e-46 188.3 140 71.4
RcHm_v2.0_Chr7g0216551 Rosa chinensis HOM05D003943 ORTHO05D004753 3.0e-43 179.9 271 46.5
Duzib106G1686 Durio zibethinus HOM05D003943 ORTHO05D004753 7.4e-42 175.3 196 53.1
RcHm_v2.0_Chr7g0216591 Rosa chinensis HOM05D003943 ORTHO05D004753 1.1e-40 171.4 108 79.6
EL10Ac3g06422 Beta vulgaris HOM05D003943 ORTHO05D004753 5.8e-39 165.6 135 65.9
HanXRQChr03g0072971 Helianthus annuus HOM05D003943 ORTHO05D004753 2.9e-38 163.3 92 87.0
Lj9C540G13 Lonicera japonica HOM05D003943 ORTHO05D004753 2.7e-36 156.8 195 49.7
BcaC01g01015 Brassica carinata HOM05D003943 ORTHO05D004753 1.1e-34 151.4 100 81.0
Lsat_1_v5_gn_6_65181 Lactuca sativa HOM05D003943 ORTHO05D000236 5.9e-31 139.0 92 77.2
SHI12413 Sapria himalayana HOM05D003943 ORTHO05D004753 8.5e-30 135.2 81 82.7
Actinidia21636 Actinidia chinensis HOM05D003943 ORTHO05D004753 6.3e-25 119.0 111 62.2
SHI12416 Sapria himalayana HOM05D001600 ORTHO05D001502 5.7e-18 95.9 64 78.1
RcHm_v2.0_Chr7g0216581 Rosa chinensis HOM05D003943 ORTHO05D004753 6.5e-14 82.4 81 58.0
SHI17182 Sapria himalayana HOM05D000004 ORTHO05D367797 2.0e-10 70.9 94 46.8
CAN.G1001.28 Capsicum annuum HOM05D003943 ORTHO05D005733 4.8e-09 66.2 59 59.3
C03p87270 Brassica napus HOM05D000836 ORTHO05D000709 1.1e-08 65.1 85 45.9
Nitab4.5_0006519g0020 Nicotiana tabacum HOM05D000032 ORTHO05D005217 4.1e-08 63.2 52 67.3
BcaC05g26689 Brassica carinata HOM05D003943 ORTHO05D004753 2.0e-07 60.8 38 73.7
C04p30500 Brassica napus HOM05D002284 ORTHO05D033292 3.5e-07 60.1 34 82.4
SHI30650 Sapria himalayana HOM05D004596 ORTHO05D005853 1.3e-06 58.2 60 58.3
SHI32256 Sapria himalayana HOM05D003943 ORTHO05D001502 1.3e-06 58.2 34 79.4


User provided reference genes

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