Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 4.1e-192 674.5 319 100.0
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 7.0e-176 620.5 318 89.9
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.0e-174 616.7 318 89.6
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 3.8e-174 614.8 318 89.6
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 6.5e-174 614.0 311 90.0
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.9e-173 612.5 313 89.5
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 1.4e-171 606.3 315 87.9
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.8e-171 605.9 317 87.7
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 8.8e-171 603.6 322 87.6
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 2.6e-170 602.1 311 88.7
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 3.4e-170 601.7 315 86.0
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 7.5e-170 600.5 315 87.6
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.7e-169 599.4 316 86.7
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 2.2e-169 599.0 314 87.3
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 2.8e-169 598.6 315 86.3
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.8e-169 597.8 315 87.3
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 8.3e-169 597.0 315 86.7
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 2.4e-168 595.5 317 85.2
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 3.1e-168 595.1 310 87.4
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.1e-168 595.1 314 87.3
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 5.3e-168 594.3 315 87.3
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 9.1e-168 593.6 314 87.6
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.2e-167 593.2 315 86.3
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 2.7e-167 592.0 315 85.7
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 2.7e-167 592.0 313 87.2
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 3.5e-167 591.7 314 86.0
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.5e-167 591.3 315 86.0
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 7.7e-167 590.5 315 86.0
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 1.0e-166 590.1 315 86.3
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 1.3e-166 589.7 315 84.8
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.3e-166 589.7 314 86.3
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 2.2e-166 589.0 319 85.3
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.9e-166 588.6 314 86.6
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 3.8e-166 588.2 315 84.8
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 3.8e-166 588.2 314 86.3
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 3.8e-166 588.2 314 86.3
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 5.0e-166 587.8 315 84.8
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 8.5e-166 587.0 309 85.8
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 8.5e-166 587.0 308 86.7
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 1.5e-165 586.3 315 84.1
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 1.9e-165 585.9 315 85.4
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 2.5e-165 585.5 315 85.1
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 2.5e-165 585.5 311 85.9
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 3.2e-165 585.1 315 85.1
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 4.2e-165 584.7 315 85.4
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 5.5e-165 584.3 318 82.4
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 5.5e-165 584.3 318 82.4
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 5.5e-165 584.3 318 83.6
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 9.4e-165 583.6 314 85.4
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 9.4e-165 583.6 314 85.4
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 9.4e-165 583.6 314 85.4
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 9.4e-165 583.6 311 86.8
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.2e-164 583.2 315 84.1
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.6e-164 582.8 314 85.7
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 4.7e-164 581.3 324 81.5
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 4.7e-164 581.3 316 83.9
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 4.7e-164 581.3 311 85.5
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 6.1e-164 580.9 314 84.7
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 8.0e-164 580.5 311 84.9
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.0e-163 580.1 315 83.8
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.0e-163 580.1 315 83.8
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.0e-163 580.1 315 84.8
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.0e-163 578.2 314 83.8
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 5.2e-163 577.8 315 83.8
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.2e-162 576.6 314 83.4
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 2.0e-162 575.9 314 83.4
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 2.6e-162 575.5 314 84.1
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 2.6e-162 575.5 314 84.1
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 2.6e-162 575.5 311 84.9
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 2.6e-162 575.5 311 84.9
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 3.4e-162 575.1 315 83.2
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 7.5e-162 573.9 315 82.5
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 9.8e-162 573.5 311 85.5
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 9.8e-162 573.5 374 73.3
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 9.8e-162 573.5 308 84.4
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 1.3e-161 573.2 317 83.3
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 2.8e-161 572.0 320 83.8
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 3.7e-161 571.6 308 85.4
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 1.1e-160 570.1 318 81.8
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 2.4e-160 568.9 314 82.5
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 5.4e-160 567.8 314 82.2
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 7.0e-160 567.4 298 87.2
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 1.6e-159 566.2 316 83.2
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 2.0e-159 565.8 317 81.1
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 4.5e-159 564.7 314 81.8
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 5.9e-159 564.3 313 81.2
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 7.7e-159 563.9 315 83.2
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 2.3e-158 562.4 314 81.2
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 1.1e-157 560.1 319 80.3
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 1.9e-157 559.3 320 80.3
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 3.3e-157 558.5 313 81.8
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 2.1e-156 555.8 308 82.1
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 3.6e-156 555.1 310 82.6
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 4.7e-156 554.7 314 79.0
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 4.0e-155 551.6 316 79.4
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 5.2e-155 551.2 316 78.5
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 4.4e-154 548.1 314 80.3
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 8.3e-153 543.9 314 79.9
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 1.4e-152 543.1 316 78.8
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 9.2e-152 540.4 336 75.0
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 5.9e-151 537.7 313 79.2
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 3.9e-150 535.0 316 77.2
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 7.3e-149 530.8 316 76.9
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 2.1e-148 529.3 316 76.6
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 1.8e-147 526.2 309 76.7
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 3.1e-147 525.4 269 90.3
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 5.2e-147 524.6 310 76.1
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 6.8e-147 524.2 278 86.3
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.7e-145 519.6 304 80.9
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 1.2e-143 513.5 300 78.0
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 1.2e-143 513.5 311 74.9
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 1.7e-142 509.6 296 75.7
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 8.0e-140 500.7 264 87.1
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 1.4e-136 490.0 310 71.0
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 1.2e-132 476.9 333 69.7
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 8.9e-131 470.7 251 84.9
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 2.0e-130 469.5 308 68.8
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 2.0e-130 469.5 308 68.8
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 4.1e-128 461.8 305 67.5
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 2.3e-126 456.1 308 65.6
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 9.3e-120 434.1 230 87.0
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 4.3e-117 425.2 307 60.3
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 4.6e-103 378.6 308 57.5
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 7.4e-101 371.3 253 68.0
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 6.5e-97 358.2 215 76.3
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 3.5e-87 325.9 315 49.2
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 7.9e-79 298.1 344 43.0
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 8.8e-70 268.1 360 39.2
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.9e-56 223.8 123 79.7
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 3.2e-35 153.3 82 86.6
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 1.4e-30 137.9 89 76.4
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.6e-23 113.2 84 67.9
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 1.7e-20 104.4 68 72.1
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 1.4e-14 84.7 48 72.9
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 5.2e-14 82.8 68 61.8
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 8.9e-14 82.0 43 79.1
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 8.9e-14 82.0 41 82.9
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 5.1e-09 66.2 42 64.3


User provided reference genes

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