Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000578 Camellia sinensis var. sinensis HOM05D007085 ORTHO05D008828 2.1e-43 179.9 213 100.0
CSS0001065 Camellia sinensis var. sinensis HOM05D007085 ORTHO05D008828 1.0e-42 177.6 213 99.5
Lj8P143T18 Lonicera japonica HOM05D007085 ORTHO05D008828 3.8e-29 132.5 216 87.5
vmacro09426 Vaccinium macrocarpon HOM05D007085 ORTHO05D008828 3.6e-27 125.9 216 85.6
Haze_08476 Corylus avellana HOM05D007085 ORTHO05D008828 7.0e-23 111.7 217 84.3
ClCG11G016990 Citrullus lanatus HOM05D007085 ORTHO05D008828 1.2e-22 110.9 213 85.4
CsaV3_4G032620 Cucumis sativus L. HOM05D007085 ORTHO05D008828 1.6e-22 110.5 204 87.7
Cfa019473 Carpinus fangiana HOM05D007085 ORTHO05D008828 3.5e-22 109.4 217 83.9
MELO3C025593.2 Cucumis melo HOM05D007085 ORTHO05D008828 5.9e-22 108.6 204 86.8
Dinv13328 Davidia involucrata HOM05D007085 ORTHO05D008828 1.7e-21 107.1 54 87.0
Peaxi162Scf00573g00042 Petunia axillaris HOM05D007085 ORTHO05D008828 1.1e-20 104.4 213 82.2
PGSC0003DMG400044445 Solanum tuberosum HOM05D007085 ORTHO05D008828 1.1e-20 104.4 213 82.2
PGSC0003DMG402021252 Solanum tuberosum HOM05D007085 ORTHO05D008828 1.1e-20 104.4 213 82.2
DCAR_021048 Daucus carota HOM05D007085 ORTHO05D008828 2.5e-20 103.2 201 65.7
Lsat_1_v5_gn_9_101401 Lactuca sativa HOM05D007085 ORTHO05D008828 1.6e-19 100.5 198 86.9
CAN.G4458.1 Capsicum annuum HOM05D007085 ORTHO05D008828 2.8e-19 99.8 215 78.1
CAN.G904.26 Capsicum annuum HOM05D007085 ORTHO05D008828 2.8e-19 99.8 215 78.1
CAN.G904.38 Capsicum annuum HOM05D007085 ORTHO05D008828 2.8e-19 99.8 215 78.1
Oeu006136.1 Olea europaea HOM05D007085 ORTHO05D008828 4.7e-19 99.0 51 84.3
SalBow8G4060 Salvia bowleyana HOM05D007085 ORTHO05D008828 8.0e-19 98.2 214 78.0
Ah.04g163870 Amaranthus hybridus HOM05D007085 ORTHO05D008828 1.4e-18 97.4 210 80.0
Migut.M00624 Erythranthe guttata HOM05D007085 ORTHO05D008828 5.2e-18 95.5 199 78.4
Ciclev10020422m.g Citrus clementina HOM05D007085 ORTHO05D008828 6.8e-18 95.1 198 86.4
TAR627G0225 Trochodendron aralioides HOM05D007085 ORTHO05D008828 6.8e-18 95.1 54 77.8
Oeu009876.3 Olea europaea HOM05D007085 ORTHO05D008828 8.9e-18 94.7 52 78.8
Nitab4.5_0000923g0040 Nicotiana tabacum HOM05D000021 ORTHO05D008828 4.4e-17 92.4 214 75.2
RhsimUnG0205600 Rhododendron simsii HOM05D007085 ORTHO05D008828 4.4e-17 92.4 51 82.4
Nn3g20730 Nelumbo nucifera HOM05D007085 ORTHO05D008828 7.5e-17 91.7 54 74.1
EL10Ac4g08466 Beta vulgaris HOM05D007085 ORTHO05D008828 1.3e-16 90.9 54 74.1
Sed0002576 Sechium edule HOM05D007085 ORTHO05D008828 1.3e-16 90.9 54 72.2
Cc05_g10440 Coffea canephora HOM05D007085 ORTHO05D008828 1.7e-16 90.5 54 75.9
SGA_v2.0_scaffold34G13702 Striga asiatica HOM05D007085 ORTHO05D008828 1.7e-16 90.5 54 77.8
QL04p068992 Quercus lobata HOM05D007085 ORTHO05D008828 2.9e-16 89.7 54 77.8
Aqoxy2G00336 Aquilegia oxysepala HOM05D007085 ORTHO05D008828 6.4e-16 88.6 54 72.2
TWI60G0193 Tripterygium wilfordii HOM05D007085 ORTHO05D008828 6.4e-16 88.6 52 76.9
Manes.01G152600 Manihot esculenta HOM05D007085 ORTHO05D008828 1.1e-15 87.8 52 76.9
PGR031G3190 Punica granatum HOM05D007085 ORTHO05D008828 2.4e-15 86.7 52 73.1
CiPaw.12G046300 Carya illinoinensis HOM05D007085 ORTHO05D008828 3.2e-15 86.3 52 75.0
Eucgr.F03214 Eucalyptus grandis HOM05D007085 ORTHO05D008828 7.0e-15 85.1 52 71.2
SHI27645 Sapria himalayana HOM05D007085 ORTHO05D008828 9.2e-15 84.7 50 76.0
AUR62037984 Chenopodium quinoa HOM05D007085 ORTHO05D008828 1.6e-14 84.0 46 78.3
Cpa.g.sc2050.1 Carica papaya HOM05D007085 ORTHO05D008828 2.7e-14 83.2 51 74.5
Sc03g0010930 Simmondsia chinensis HOM05D007085 ORTHO05D008828 1.0e-13 81.3 214 78.5
CARHR089540 Cardamine hirsuta HOM05D007085 ORTHO05D008828 3.9e-13 79.3 51 68.6
Hma1.2p1_0587F.1_g184339 Hydrangea macrophylla HOM05D007085 ORTHO05D008828 3.9e-13 79.3 45 77.8
Hma1.2p1_0587F.1_g184370 Hydrangea macrophylla HOM05D007085 ORTHO05D008828 3.9e-13 79.3 45 77.8
AL3G26910 Arabidopsis lyrata HOM05D007085 ORTHO05D008828 5.0e-13 79.0 51 68.6
Sc03g0010950 Simmondsia chinensis HOM05D007085 ORTHO05D008828 5.0e-13 79.0 51 66.7
ATR0605G112 Amborella trichopoda HOM05D007085 ORTHO05D008828 6.6e-13 78.6 51 60.8
Thhalv10020856m.g Eutrema salsugineum HOM05D007085 ORTHO05D008828 6.6e-13 78.6 53 66.0
HanXRQChr10g0296911 Helianthus annuus HOM05D007085 ORTHO05D008828 6.6e-13 78.6 46 73.9
Carub.0003s1428 Capsella rubella HOM05D007085 ORTHO05D008828 8.6e-13 78.2 51 66.7
TPR.G29685 Trifolium pratense HOM05D007085 ORTHO05D008828 8.6e-13 78.2 213 51.2
AT3G14580 Arabidopsis thaliana HOM05D007085 ORTHO05D008828 1.5e-12 77.4 51 66.7
BcaB06g25373 Brassica carinata HOM05D007085 ORTHO05D008828 1.9e-12 77.0 49 69.4
Sp3g12850 Schrenkiella parvula HOM05D007085 ORTHO05D008828 3.3e-12 76.3 49 69.4
Aa31LG8G1790 Aethionema arabicum HOM05D000230 ORTHO05D000176 5.6e-12 75.5 51 62.7
CANSAT56G2932 Cannabis sativa HOM05D007085 ORTHO05D008828 4.7e-11 72.4 216 75.5
Medtr0060s0100 Medicago truncatula HOM05D007085 ORTHO05D008828 1.1e-10 71.2 49 69.4
BraA05t22296Z Brassica rapa HOM05D007085 ORTHO05D008828 1.4e-10 70.9 45 71.1
Gorai.007G333400 Gossypium raimondii HOM05D007085 ORTHO05D008828 1.8e-10 70.5 192 83.3
Os04g0618050 Oryza sativa ssp. japonica HOM05D007085 ORTHO05D008828 3.1e-10 69.7 52 55.8
ECA240G0168 Erigeron canadensis HOM05D007085 ORTHO05D008828 4.0e-10 69.3 41 73.2
BolC5t33948H Brassica oleracea HOM05D007085 ORTHO05D008828 6.8e-10 68.6 47 63.8
Prupe.4G152100 Prunus persica HOM05D007085 ORTHO05D008828 1.2e-09 67.8 52 57.7
FvH4_3g16970 Fragaria vesca HOM05D007085 ORTHO05D008828 1.5e-09 67.4 47 59.6
FAN11G1303 Fragaria x ananassa HOM05D007085 ORTHO05D008828 1.5e-09 67.4 47 59.6
FAN16G1935 Fragaria x ananassa HOM05D007085 ORTHO05D008828 1.5e-09 67.4 47 59.6
PSO063G4137 Papaver somniferum HOM05D007085 ORTHO05D008828 2.0e-09 67.0 51 54.9
Sopen10g003460 Solanum pennellii HOM05D007085 ORTHO05D008828 2.0e-09 67.0 50 62.0
BcaC05g29057 Brassica carinata HOM05D007085 ORTHO05D008828 3.4e-09 66.2 53 60.4
Zm00001eb431040 Zea mays HOM05D007085 ORTHO05D008828 3.4e-09 66.2 52 51.9
Potri.001G379500 Populus trichocarpa HOM05D007085 ORTHO05D008828 5.8e-09 65.5 41 75.6
Sabra16G0250000 Salix brachista HOM05D007085 ORTHO05D008828 5.8e-09 65.5 41 75.6
Solyc10g007520.3 Solanum lycopersicum HOM05D007085 ORTHO05D008828 9.8e-09 64.7 47 63.8
Medtr2g072170 Medicago truncatula HOM05D007085 ORTHO05D008828 1.3e-08 64.3 38 73.7
Oeu006142.1 Olea europaea HOM05D007085 ORTHO05D008828 2.2e-08 63.5 191 58.1
Lalb_Chr25g0285531 Lupinus albus HOM05D007085 ORTHO05D008828 8.3e-08 61.6 51 54.9
CDE04G0400 Ceratophyllum demersum HOM05D007085 ORTHO05D008828 5.4e-07 58.9 40 62.5
BcaC05g29059 Brassica carinata HOM05D007085 ORTHO05D008828 1.2e-06 57.8 38 65.8
C05p52690 Brassica napus HOM05D007085 ORTHO05D008828 1.2e-06 57.8 38 65.8
Gorai.007G333000 Gossypium raimondii HOM05D007085 ORTHO05D008828 1.2e-06 57.8 39 61.5
Gohir.A11G290600 Gossypium hirsutum HOM05D007085 ORTHO05D008828 1.6e-06 57.4 44 54.5
Thecc.07G142300 Theobroma cacao HOM05D007085 ORTHO05D008828 1.6e-06 57.4 34 67.6
Actinidia03646 Actinidia chinensis HOM05D007085 ORTHO05D008828 2.7e-06 56.6 28 85.7
Gohir.D11G302000 Gossypium hirsutum HOM05D007085 ORTHO05D008828 2.7e-06 56.6 39 59.0
Gorai.007G332700 Gossypium raimondii HOM05D007085 ORTHO05D008828 2.7e-06 56.6 39 59.0
Gorai.007G334000 Gossypium raimondii HOM05D007085 ORTHO05D008828 2.7e-06 56.6 39 59.0
Gorai.007G334300 Gossypium raimondii HOM05D007085 ORTHO05D008828 2.7e-06 56.6 39 59.0
Gorai.007G334700 Gossypium raimondii HOM05D007085 ORTHO05D008828 2.7e-06 56.6 39 59.0
ClCG11G017080 Citrullus lanatus HOM05D002453 ORTHO05D008746 3.5e-06 56.2 44 54.5
Nitab4.5_0009310g0040 Nicotiana tabacum HOM05D007085 ORTHO05D008828 7.8e-06 55.1 38 55.3


User provided reference genes

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