Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 5.1e-97 357.8 193 100.0
CSS0001139 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D112888 1.7e-52 209.9 178 68.0
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 1.2e-13 80.9 48 91.7
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 2.1e-13 80.1 48 89.6
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 1.0e-12 77.8 48 85.4
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 1.3e-12 77.4 48 85.4
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 2.3e-12 76.6 48 85.4
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 3.9e-12 75.9 48 83.3
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 3.9e-12 75.9 48 83.3
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 3.9e-12 75.9 48 83.3
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 3.9e-12 75.9 48 83.3
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 3.9e-12 75.9 48 83.3
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 5.1e-12 75.5 48 81.2
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 5.1e-12 75.5 53 75.5
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 5.1e-12 75.5 48 85.4
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 5.1e-12 75.5 73 60.3
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 5.1e-12 75.5 49 81.6
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 6.6e-12 75.1 48 85.4
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 8.6e-12 74.7 48 81.2
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 8.6e-12 74.7 48 81.2
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 8.6e-12 74.7 48 81.2
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 8.6e-12 74.7 48 81.2
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 8.6e-12 74.7 48 83.3
CSS0015096 Camellia sinensis var. sinensis HOM05D000696 ORTHO05D003201 1.1e-11 74.3 42 81.0
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 1.1e-11 74.3 48 81.2
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 1.1e-11 74.3 48 81.2
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 1.1e-11 74.3 48 81.2
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 1.1e-11 74.3 48 81.2
GSVIVG01002254001 Vitis vinifera HOM05D004954 ORTHO05D006267 1.1e-11 74.3 48 83.3
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 1.9e-11 73.6 46 82.6
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 1.9e-11 73.6 46 82.6
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 1.9e-11 73.6 46 82.6
CSS0002668 Camellia sinensis var. sinensis HOM05D000696 ORTHO05D003201 2.5e-11 73.2 42 78.6
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 2.5e-11 73.2 48 81.2
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 2.5e-11 73.2 73 58.9
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 3.3e-11 72.8 48 79.2
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 3.3e-11 72.8 48 81.2
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 3.3e-11 72.8 48 81.2
COL.COLO4_03295 Corchorus olitorius HOM05D004954 ORTHO05D006267 3.3e-11 72.8 48 79.2
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 3.3e-11 72.8 48 79.2
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 5.6e-11 72.0 48 77.1
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 5.6e-11 72.0 48 81.2
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 5.6e-11 72.0 48 81.2
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 7.3e-11 71.6 46 82.6
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 7.3e-11 71.6 46 82.6
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 9.5e-11 71.2 48 81.2
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 9.5e-11 71.2 48 79.2
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 1.2e-10 70.9 48 79.2
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 1.6e-10 70.5 48 77.1
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 1.6e-10 70.5 48 79.2
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 1.6e-10 70.5 48 72.9
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.6e-10 70.5 48 72.9
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.6e-10 70.5 48 72.9
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.6e-10 70.5 48 72.9
CSS0007838 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 2.1e-10 70.1 57 75.4
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 2.1e-10 70.1 48 79.2
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 2.1e-10 70.1 46 80.4
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 2.8e-10 69.7 48 77.1
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 2.8e-10 69.7 48 79.2
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 3.6e-10 69.3 61 65.6
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 3.6e-10 69.3 48 72.9
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 4.7e-10 68.9 46 82.6
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 4.7e-10 68.9 46 78.3
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 4.7e-10 68.9 48 77.1
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 4.7e-10 68.9 82 51.2
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 4.7e-10 68.9 48 77.1
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 4.7e-10 68.9 48 77.1
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 4.7e-10 68.9 46 78.3
CSS0024470 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 6.2e-10 68.6 56 73.2
SEGI_36119 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 6.2e-10 68.6 46 76.1
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 8.1e-10 68.2 48 77.1
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 1.1e-09 67.8 48 79.2
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 1.1e-09 67.8 46 76.1
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 1.1e-09 67.8 47 74.5
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 1.4e-09 67.4 48 75.0
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 1.4e-09 67.4 48 75.0
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 1.4e-09 67.4 48 75.0
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 1.4e-09 67.4 48 75.0
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 1.8e-09 67.0 46 76.1
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 2.3e-09 66.6 46 78.3
CSS0002516 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D014145 3.1e-09 66.2 55 76.4
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 3.1e-09 66.2 48 72.9
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 3.1e-09 66.2 48 72.9
CSS0018520 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 4.0e-09 65.9 57 70.2
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 4.0e-09 65.9 69 55.1
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 5.2e-09 65.5 50 72.0
Ca_12408_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 5.2e-09 65.5 50 72.0
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 5.2e-09 65.5 48 72.9
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 5.2e-09 65.5 61 59.0
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 6.8e-09 65.1 48 70.8
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 6.8e-09 65.1 46 78.3
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 6.8e-09 65.1 70 57.1
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 1.2e-08 64.3 48 66.7
CSS0024000 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 1.5e-08 63.9 55 74.5
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 1.5e-08 63.9 48 70.8
CSS0034897 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 2.0e-08 63.5 58 65.5
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 2.0e-08 63.5 48 70.8
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 2.0e-08 63.5 48 70.8
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 2.6e-08 63.2 46 73.9
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 3.4e-08 62.8 48 68.8
CSS0027546 Camellia sinensis var. sinensis HOM05D000696 ORTHO05D003201 3.4e-08 62.8 35 77.1
QL09p053445 Quercus lobata HOM05D004954 ORTHO05D030058 3.4e-08 62.8 45 73.3
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 7.6e-08 61.6 48 70.8
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 7.6e-08 61.6 48 70.8
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 7.6e-08 61.6 47 66.0
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 7.6e-08 61.6 70 55.7
CSS0012027 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D014145 9.9e-08 61.2 68 60.3
Dinv42789 Davidia involucrata HOM05D000696 ORTHO05D003201 9.9e-08 61.2 37 70.3
Dinv43312 Davidia involucrata HOM05D000696 ORTHO05D003201 9.9e-08 61.2 37 70.3
CSS0000457 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 1.3e-07 60.8 55 70.9
CSS0037793 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.3e-07 60.8 78 56.4
MD05G1161700 Malus domestica HOM05D004954 ORTHO05D006267 1.7e-07 60.5 40 77.5
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 1.7e-07 60.5 46 73.9
Atru.chr12.964 Acer truncatum HOM05D004954 ORTHO05D006267 2.9e-07 59.7 44 68.2
Actinidia33312 Actinidia chinensis HOM05D000696 ORTHO05D003201 4.9e-07 58.9 35 71.4
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 4.9e-07 58.9 73 47.9
CAN.G551.5 Capsicum annuum HOM05D000696 ORTHO05D003201 2.4e-06 56.6 36 69.4
Ciclev10018232m.g Citrus clementina HOM05D004954 ORTHO05D006267 2.4e-06 56.6 45 62.2
Actinidia20952 Actinidia chinensis HOM05D000696 ORTHO05D003201 3.2e-06 56.2 42 64.3
Hma1.2p1_0156F.1_g068700 Hydrangea macrophylla HOM05D000696 ORTHO05D003201 3.2e-06 56.2 36 63.9
Hma1.2p1_1495F.1_g287000 Hydrangea macrophylla HOM05D000696 ORTHO05D003201 3.2e-06 56.2 36 63.9
CSS0008873 Camellia sinensis var. sinensis HOM05D000696 ORTHO05D003201 4.1e-06 55.8 27 88.9
CSS0010447 Camellia sinensis var. sinensis HOM05D000740 ORTHO05D014145 4.1e-06 55.8 84 45.2
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 4.1e-06 55.8 45 64.4
Hma1.2p1_1531F.1_g289260 Hydrangea macrophylla HOM05D000696 ORTHO05D003201 5.4e-06 55.5 34 67.6
vmacro13059 Vaccinium macrocarpon HOM05D000696 ORTHO05D003201 5.4e-06 55.5 36 66.7
CiPaw.08G040700 Carya illinoinensis HOM05D000696 ORTHO05D003201 7.1e-06 55.1 36 66.7
Haze_22174 Corylus avellana HOM05D000696 ORTHO05D003201 7.1e-06 55.1 44 63.6
Eucgr.C00214 Eucalyptus grandis HOM05D000696 ORTHO05D003201 7.1e-06 55.1 36 66.7
PGSC0003DMG400007879 Solanum tuberosum HOM05D000696 ORTHO05D003201 7.1e-06 55.1 36 66.7
Zm00001eb278340 Zea mays HOM05D004954 ORTHO05D006267 7.1e-06 55.1 48 60.4
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 9.2e-06 54.7 40 70.0
CiPaw.07G186200 Carya illinoinensis HOM05D000696 ORTHO05D003201 9.2e-06 54.7 32 75.0
Gohir.A08G093500 Gossypium hirsutum HOM05D000696 ORTHO05D003201 9.2e-06 54.7 36 66.7
Gorai.004G104100 Gossypium raimondii HOM05D000696 ORTHO05D003201 9.2e-06 54.7 36 66.7


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