Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 6.7e-69 263.8 130 100.0
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 3.6e-38 161.8 126 70.6
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 5.8e-36 154.5 125 69.6
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 8.3e-35 150.6 124 62.9
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 1.7e-32 142.9 125 63.2
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 3.0e-32 142.1 123 61.8
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 9.5e-31 137.1 125 63.2
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 1.2e-30 136.7 147 56.5
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 1.1e-29 133.7 125 59.2
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 1.8e-29 132.9 124 59.7
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 3.1e-29 132.1 122 58.2
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 5.2e-29 131.3 125 59.2
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 8.9e-29 130.6 120 58.3
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 8.9e-29 130.6 124 58.9
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.2e-28 130.2 124 58.9
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 3.4e-28 128.6 124 57.3
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 3.4e-28 128.6 122 59.8
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 4.4e-28 128.3 124 58.9
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 7.5e-28 127.5 124 53.2
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 1.3e-27 126.7 125 56.8
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 1.3e-27 126.7 124 58.1
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 1.7e-27 126.3 124 52.4
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 1.7e-27 126.3 119 53.8
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 1.7e-27 126.3 125 56.0
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 2.9e-27 125.6 124 56.5
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 4.9e-27 124.8 124 52.4
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 1.4e-26 123.2 100 66.0
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 1.4e-26 123.2 119 56.3
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 1.9e-26 122.9 125 53.6
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 1.9e-26 122.9 124 51.6
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 7.1e-26 120.9 123 53.7
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 9.2e-26 120.6 125 53.6
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 1.2e-25 120.2 126 56.3
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.2e-25 120.2 125 56.8
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 2.1e-25 119.4 124 57.3
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 2.1e-25 119.4 125 55.2
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 3.5e-25 118.6 125 53.6
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 4.6e-25 118.2 124 54.0
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 4.6e-25 118.2 128 53.9
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 4.6e-25 118.2 106 65.1
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 6.0e-25 117.9 121 52.9
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 1.0e-24 117.1 123 55.3
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 1.7e-24 116.3 122 54.9
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 3.9e-24 115.2 124 53.2
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 3.9e-24 115.2 125 54.4
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 3.9e-24 115.2 124 54.8
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 5.1e-24 114.8 125 53.6
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 5.1e-24 114.8 121 52.1
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 8.6e-24 114.0 125 56.8
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 1.5e-23 113.2 126 51.6
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 4.3e-23 111.7 125 51.2
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 9.5e-23 110.5 126 54.8
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 9.5e-23 110.5 125 52.0
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 1.6e-22 109.8 128 53.9
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 2.1e-22 109.4 125 52.8
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 3.6e-22 108.6 124 51.6
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 4.7e-22 108.2 124 53.2
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.4e-21 106.7 124 52.4
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 6.8e-21 104.4 154 44.2
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 2.6e-20 102.4 121 51.2
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 5.8e-20 101.3 127 50.4
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 1.7e-19 99.8 120 51.7
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 2.2e-19 99.4 123 50.4
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 2.2e-19 99.4 119 47.1
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 2.9e-19 99.0 127 49.6
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 3.8e-19 98.6 97 52.6
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 3.8e-19 98.6 125 48.8
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 4.9e-19 98.2 132 47.7
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 8.4e-19 97.4 113 53.1
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 3.2e-18 95.5 128 50.0
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 7.1e-18 94.4 108 50.0
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 1.6e-17 93.2 129 45.7
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 4.6e-17 91.7 66 66.7
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 3.0e-16 89.0 124 43.5
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 3.9e-16 88.6 135 43.7
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 1.1e-15 87.0 100 49.0
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 1.1e-15 87.0 63 65.1
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 7.3e-15 84.3 120 45.8
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.6e-14 83.2 153 41.2
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 1.6e-14 83.2 89 55.1
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 2.1e-14 82.8 135 45.2
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 2.1e-14 82.8 63 65.1
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 3.6e-14 82.0 56 69.6
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 4.8e-14 81.6 123 43.9
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 6.2e-14 81.3 59 62.7
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 1.8e-13 79.7 135 37.8
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 1.8e-13 79.7 90 52.2
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 5.3e-13 78.2 50 72.0
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 6.9e-13 77.8 55 69.1
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 2.0e-12 76.3 116 44.0
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 2.0e-12 76.3 50 70.0
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 1.3e-11 73.6 58 62.1
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 2.9e-11 72.4 120 43.3
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 2.9e-11 72.4 62 53.2
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 8.4e-11 70.9 67 59.7
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 1.1e-10 70.5 131 44.3
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 1.1e-10 70.5 41 78.0
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 1.4e-10 70.1 36 86.1
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 1.4e-10 70.1 123 43.9
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 1.4e-10 70.1 116 44.0
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 1.9e-10 69.7 44 72.7
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 1.9e-10 69.7 44 77.3
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 3.2e-10 68.9 44 75.0
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 4.2e-10 68.6 109 47.7
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 4.2e-10 68.6 40 72.5
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 7.1e-10 67.8 113 42.5
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 7.1e-10 67.8 116 42.2
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 7.1e-10 67.8 44 65.9
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 1.2e-09 67.0 113 43.4
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 1.6e-09 66.6 127 40.9
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 1.6e-09 66.6 125 41.6
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 2.1e-09 66.2 38 73.7
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 2.7e-09 65.9 162 35.8
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 2.7e-09 65.9 44 65.9
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 2.7e-09 65.9 123 42.3
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 3.5e-09 65.5 104 41.3
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 3.5e-09 65.5 110 40.0
Cpa.g.sc91.24 Carica papaya HOM05D005141 ORTHO05D006250 3.5e-09 65.5 91 45.1
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 4.6e-09 65.1 67 49.3
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 6.0e-09 64.7 114 40.4
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 6.0e-09 64.7 112 42.9
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 1.0e-08 63.9 43 62.8
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 2.3e-08 62.8 55 54.5
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 1.9e-07 59.7 134 32.8
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 4.3e-07 58.5 125 34.4


User provided reference genes

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