Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 9.0e-137 490.3 264 100.0
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 9.8e-91 337.4 280 68.6
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.2e-87 326.2 281 71.9
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 2.2e-82 309.7 271 66.4
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 4.7e-77 292.0 274 62.8
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 4.1e-73 278.9 282 63.1
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 2.3e-71 273.1 281 59.1
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 5.6e-70 268.5 278 58.6
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 2.1e-69 266.5 274 59.1
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 2.8e-69 266.2 275 58.5
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 3.6e-69 265.8 274 59.1
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 1.0e-68 264.2 274 60.9
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 4.0e-68 262.3 285 60.7
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 8.9e-68 261.2 274 60.2
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 8.9e-68 261.2 274 60.2
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 2.0e-67 260.0 281 58.4
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 2.0e-67 260.0 281 61.6
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 8.3e-66 254.6 274 57.7
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 1.9e-65 253.4 279 55.2
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 2.4e-65 253.1 282 56.4
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 1.2e-64 250.8 281 59.4
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.2e-64 250.8 281 57.3
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 7.8e-64 248.1 279 58.8
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 2.5e-62 243.0 275 57.1
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 5.6e-62 241.9 273 57.5
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 5.6e-62 241.9 282 55.0
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 9.5e-62 241.1 281 61.2
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 9.5e-62 241.1 281 60.9
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 2.8e-61 239.6 282 57.4
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.6e-61 239.2 282 59.9
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 6.2e-61 238.4 282 59.9
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 6.2e-61 238.4 276 55.8
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.1e-60 237.7 198 69.2
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 8.9e-60 234.6 282 59.6
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 2.0e-59 233.4 282 56.7
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 2.6e-59 233.0 284 54.6
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 5.8e-59 231.9 281 55.9
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 7.5e-59 231.5 288 53.8
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 7.5e-59 231.5 281 55.5
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 9.8e-59 231.1 266 55.3
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 9.8e-59 231.1 300 51.0
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.3e-58 230.7 278 55.8
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.3e-58 230.7 280 55.7
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.7e-58 230.3 284 56.0
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 2.2e-58 229.9 278 55.8
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 2.2e-58 229.9 271 55.7
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 2.9e-58 229.6 277 54.2
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 6.4e-58 228.4 286 52.1
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 8.3e-58 228.0 280 54.6
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 8.3e-58 228.0 270 55.2
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 1.4e-57 227.3 276 53.3
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 2.4e-57 226.5 266 56.8
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 5.4e-57 225.3 270 56.3
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 2.1e-56 223.4 284 53.2
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 7.8e-56 221.5 281 52.3
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 7.8e-56 221.5 271 54.6
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 2.3e-55 219.9 271 56.1
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 2.5e-54 216.5 280 52.9
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 4.3e-54 215.7 277 54.2
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 1.8e-52 210.3 249 55.8
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 1.8e-52 210.3 292 50.3
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 1.7e-50 203.8 268 51.1
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 2.2e-50 203.4 285 50.5
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 6.4e-50 201.8 281 51.6
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 2.4e-49 199.9 268 54.1
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.7e-48 196.4 273 48.4
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 6.0e-48 195.3 287 50.2
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 1.3e-47 194.1 293 49.1
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 1.7e-47 193.7 298 47.3
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 6.6e-47 191.8 259 57.1
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 1.1e-46 191.0 309 46.6
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 1.5e-46 190.7 274 48.9
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 1.5e-46 190.7 273 50.2
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 1.9e-46 190.3 272 51.1
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 1.9e-46 190.3 272 49.6
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 5.6e-46 188.7 270 46.7
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 4.0e-44 182.6 243 51.4
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 6.8e-44 181.8 267 47.9
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 1.2e-43 181.0 275 46.2
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 1.5e-43 180.6 233 52.4
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 2.0e-43 180.3 241 54.4
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 1.3e-42 177.6 270 48.5
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 1.3e-42 177.6 270 48.5
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 1.7e-42 177.2 274 47.4
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 2.2e-42 176.8 296 47.0
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 1.1e-41 174.5 249 50.2
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 2.4e-41 173.3 270 48.5
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 3.2e-41 172.9 270 47.8
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 5.4e-41 172.2 270 48.1
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 5.4e-41 172.2 289 46.4
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.3e-39 167.5 285 44.9
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 5.6e-38 162.2 167 59.9
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 2.1e-37 160.2 251 49.4
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 4.8e-37 159.1 168 66.1
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.4e-36 157.5 216 51.4
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 2.4e-36 156.8 273 48.0
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 4.5e-35 152.5 282 43.3
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 9.3e-33 144.8 210 50.0
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 1.6e-32 144.1 256 46.9
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 2.7e-32 143.3 263 42.2
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 2.7e-32 143.3 260 42.3
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 5.6e-30 135.6 102 77.5
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 1.3e-29 134.4 274 39.8
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 8.1e-29 131.7 235 42.6
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 4.0e-28 129.4 177 51.4
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 1.2e-24 117.9 337 33.8
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 1.8e-23 114.0 229 38.9
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 2.9e-18 96.7 178 44.9
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 7.1e-17 92.0 94 53.2
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.0e-15 88.2 228 36.8
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 2.3e-15 87.0 176 42.6
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 9.3e-09 65.1 85 47.1
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 3.6e-08 63.2 78 48.7
vmacro15008 Vaccinium macrocarpon HOM05D002674 ORTHO05D426855 6.1e-08 62.4 35 80.0
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 1.8e-07 60.8 192 37.5
Rhsim01G0284900 Rhododendron simsii HOM05D000113 ORTHO05D008110 2.3e-07 60.5 34 82.4


User provided reference genes

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