Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000513 Camellia sinensis var. sinensis HOM05D007527 ORTHO05D009523 9.6e-72 273.5 146 100.0
Actinidia15754 Actinidia chinensis HOM05D007527 ORTHO05D009523 4.6e-34 148.3 147 63.3
vmacro16881 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 2.8e-31 139.0 149 57.0
Rhsim12G0190600 Rhododendron simsii HOM05D007527 ORTHO05D009523 2.9e-28 129.0 148 54.1
Dinv30616 Davidia involucrata HOM05D007527 ORTHO05D009523 1.4e-25 120.2 112 64.3
COL.COLO4_11916 Corchorus olitorius HOM05D007527 ORTHO05D009523 2.3e-25 119.4 146 52.7
Hma1.2p1_0242F.1_g100670 Hydrangea macrophylla HOM05D007527 ORTHO05D009523 1.8e-22 109.8 147 48.3
Gorai.006G101400 Gossypium raimondii HOM05D007527 ORTHO05D009523 2.4e-22 109.4 146 48.6
Gohir.D09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 1.2e-21 107.1 146 47.9
Thecc.06G029900 Theobroma cacao HOM05D007527 ORTHO05D009523 1.2e-21 107.1 146 48.6
Gohir.A09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 2.6e-21 105.9 144 47.2
Duzib160G0519 Durio zibethinus HOM05D007527 ORTHO05D009523 4.5e-21 105.1 110 57.3
Atru.chr1.2902 Acer truncatum HOM05D007527 ORTHO05D009523 1.9e-19 99.8 143 49.0
Cfa001953 Carpinus fangiana HOM05D007527 ORTHO05D009523 3.2e-19 99.0 153 44.4
TWI12G0113 Tripterygium wilfordii HOM05D007527 ORTHO05D009523 3.2e-19 99.0 95 60.0
Lsat_1_v5_gn_5_131420 Lactuca sativa HOM05D007527 ORTHO05D009523 7.2e-19 97.8 89 59.6
CiPaw.01G249100 Carya illinoinensis HOM05D007527 ORTHO05D009523 1.6e-18 96.7 98 53.1
Ciclev10026543m.g Citrus clementina HOM05D007527 ORTHO05D009523 2.1e-18 96.3 151 46.4
GSVIVG01017356001 Vitis vinifera HOM05D007527 ORTHO05D009523 2.7e-18 95.9 104 55.8
TAR383G1076 Trochodendron aralioides HOM05D007527 ORTHO05D009523 4.7e-18 95.1 144 48.6
Haze_16571 Corylus avellana HOM05D007527 ORTHO05D009523 1.0e-17 94.0 146 43.8
Eucgr.B02436 Eucalyptus grandis HOM05D007527 ORTHO05D009523 1.4e-17 93.6 107 52.3
Manes.04G111800 Manihot esculenta HOM05D007527 ORTHO05D009523 3.0e-17 92.4 96 50.0
SGA_v2.0_scaffold43G16304 Striga asiatica HOM05D007527 ORTHO05D009523 6.7e-17 91.3 87 57.5
Migut.N01835 Erythranthe guttata HOM05D007527 ORTHO05D009523 1.1e-16 90.5 89 59.6
Manes.11G058100 Manihot esculenta HOM05D007527 ORTHO05D009523 1.1e-16 90.5 61 70.5
vmacro07515 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.1e-16 90.5 106 53.8
MBI15_g00959_MAGBIO Magnolia biondii HOM05D007527 ORTHO05D009523 1.5e-16 90.1 66 68.2
PGR102G2450 Punica granatum HOM05D007527 ORTHO05D009523 2.0e-16 89.7 121 49.6
FAN05G4324 Fragaria x ananassa HOM05D007527 ORTHO05D009523 4.4e-16 88.6 145 44.1
ClCG07G012200 Citrullus lanatus HOM05D007527 ORTHO05D009523 5.7e-16 88.2 147 44.9
MD17G1213600 Malus domestica HOM05D007527 ORTHO05D009523 5.7e-16 88.2 145 44.1
RcHm_v2.0_Chr2g0134671 Rosa chinensis HOM05D007527 ORTHO05D009523 7.4e-16 87.8 62 72.6
MSTRG.5063 Avicennia marina HOM05D007527 ORTHO05D009523 1.3e-15 87.0 146 41.8
Cc04_g04490 Coffea canephora HOM05D007527 ORTHO05D009523 1.7e-15 86.7 143 44.8
MELO3C017840.2 Cucumis melo HOM05D007527 ORTHO05D009523 1.7e-15 86.7 145 43.4
FvH4_6g29470 Fragaria vesca HOM05D007527 ORTHO05D009523 2.8e-15 85.9 148 43.2
Nitab4.5_0003463g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 2.8e-15 85.9 112 46.4
CsaV3_4G001960 Cucumis sativus L. HOM05D007527 ORTHO05D009523 3.7e-15 85.5 74 63.5
FAN02G0939 Fragaria x ananassa HOM05D007527 ORTHO05D009523 3.7e-15 85.5 103 50.5
FAN14G2734 Fragaria x ananassa HOM05D007527 ORTHO05D009523 3.7e-15 85.5 148 43.2
Nn8g39533 Nelumbo nucifera HOM05D007527 ORTHO05D009523 3.7e-15 85.5 98 52.0
PGSC0003DMG400000643 Solanum tuberosum HOM05D007527 ORTHO05D009523 4.8e-15 85.1 115 47.8
FAN09G0177 Fragaria x ananassa HOM05D007527 ORTHO05D009523 8.2e-15 84.3 104 49.0
RcHm_v2.0_Chr2g0134751 Rosa chinensis HOM05D007527 ORTHO05D009523 8.2e-15 84.3 144 43.8
Solyc03g116800.4 Solanum lycopersicum HOM05D007527 ORTHO05D009523 8.2e-15 84.3 115 44.3
CAN.G407.74 Capsicum annuum HOM05D007527 ORTHO05D009523 1.1e-14 84.0 97 51.5
HanXRQChr10g0302821 Helianthus annuus HOM05D007527 ORTHO05D009523 1.1e-14 84.0 135 43.7
Nitab4.5_0008560g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 1.1e-14 84.0 112 44.6
Sabra03G0018000 Salix brachista HOM05D007527 ORTHO05D009523 1.1e-14 84.0 121 44.6
Sopen03g035730 Solanum pennellii HOM05D007527 ORTHO05D009523 1.1e-14 84.0 115 44.3
Peaxi162Scf00332g00530 Petunia axillaris HOM05D007527 ORTHO05D009523 1.8e-14 83.2 105 46.7
Potri.001G202000 Populus trichocarpa HOM05D007527 ORTHO05D009523 1.8e-14 83.2 62 71.0
Sp3g14230 Schrenkiella parvula HOM05D007527 ORTHO05D009523 2.4e-14 82.8 123 43.9
Sed0020992 Sechium edule HOM05D007527 ORTHO05D009523 4.1e-14 82.0 141 45.4
Aqoxy7G01859 Aquilegia oxysepala HOM05D007527 ORTHO05D009523 5.3e-14 81.6 62 64.5
CANSAT56G2488 Cannabis sativa HOM05D007527 ORTHO05D009523 7.0e-14 81.3 101 48.5
Lalb_Chr24g0395451 Lupinus albus HOM05D007527 ORTHO05D009523 9.1e-14 80.9 100 50.0
A01p38200 Brassica napus HOM05D007527 ORTHO05D009523 1.2e-13 80.5 135 40.7
BraA01t03878Z Brassica rapa HOM05D007527 ORTHO05D009523 1.2e-13 80.5 135 40.7
arahy.Tifrunner.gnm1.ann1.HBF5UW Arachis hypogaea HOM05D007527 ORTHO05D009523 2.0e-13 79.7 106 47.2
arahy.Tifrunner.gnm1.ann1.JM0XW1 Arachis hypogaea HOM05D007527 ORTHO05D009523 2.0e-13 79.7 106 47.2
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 2.0e-13 79.7 80 51.2
ECA234G1859 Erigeron canadensis HOM05D007527 ORTHO05D009523 2.6e-13 79.3 62 61.3
Phvul.005G178900 Phaseolus vulgaris HOM05D007527 ORTHO05D009523 2.6e-13 79.3 106 46.2
Thhalv10021721m.g Eutrema salsugineum HOM05D007527 ORTHO05D009523 4.5e-13 78.6 122 44.3
BcaB04g20897 Brassica carinata HOM05D007527 ORTHO05D009523 5.9e-13 78.2 123 40.7
BcaC09g48568 Brassica carinata HOM05D007527 ORTHO05D009523 5.9e-13 78.2 123 40.7
C01p48470 Brassica napus HOM05D007527 ORTHO05D009523 5.9e-13 78.2 123 40.7
BolC1t04807H Brassica oleracea HOM05D007527 ORTHO05D009523 5.9e-13 78.2 123 40.7
DCAR_021351 Daucus carota HOM05D002695 ORTHO05D002964 1.0e-12 77.4 92 48.9
Lj3g0017680 Lotus japonicus HOM05D007527 ORTHO05D009523 1.0e-12 77.4 121 41.3
Hund06552 Selenicereus undatus HOM05D007527 ORTHO05D009523 1.0e-12 77.4 87 50.6
RcHm_v2.0_Chr2g0134971 Rosa chinensis HOM05D007527 ORTHO05D009523 1.3e-12 77.0 59 69.5
Aa31LG8G3080 Aethionema arabicum HOM05D007527 ORTHO05D009523 1.7e-12 76.6 91 49.5
Prupe.3G089500 Prunus persica HOM05D007527 ORTHO05D009523 3.8e-12 75.5 147 40.8
PSO017G1806 Papaver somniferum HOM05D007527 ORTHO05D009523 6.5e-12 74.7 55 67.3
PSO170G5637 Papaver somniferum HOM05D007527 ORTHO05D009523 6.5e-12 74.7 104 42.3
Sc07g0004280 Simmondsia chinensis HOM05D007527 ORTHO05D009523 6.5e-12 74.7 97 46.4
AL3G28550 Arabidopsis lyrata HOM05D007527 ORTHO05D009523 8.5e-12 74.3 123 39.8
Os02g0804400 Oryza sativa ssp. japonica HOM05D007527 ORTHO05D009523 8.5e-12 74.3 58 60.3
Cpa.g.sc67.40 Carica papaya HOM05D007527 ORTHO05D009523 1.9e-11 73.2 91 45.1
VMungo1080G0810 Vigna mungo HOM05D007527 ORTHO05D009523 1.9e-11 73.2 92 46.7
CDE03G0516 Ceratophyllum demersum HOM05D007527 ORTHO05D009523 4.2e-11 72.0 77 50.6
Glyma.15G006800 Glycine max HOM05D007527 ORTHO05D009523 5.5e-11 71.6 59 59.3
HPP92_017057 Vanilla planifolia HOM05D007527 ORTHO05D009523 9.4e-11 70.9 76 43.4
ATR0716G018 Amborella trichopoda HOM05D007527 ORTHO05D009523 1.6e-10 70.1 63 54.0
AT3G15900 Arabidopsis thaliana HOM05D007527 ORTHO05D009523 1.6e-10 70.1 122 39.3
Psat5g303480 Pisum sativum HOM05D007527 ORTHO05D009523 2.1e-10 69.7 82 50.0
Ah.01g006590 Amaranthus hybridus HOM05D007527 ORTHO05D009523 2.7e-10 69.3 97 45.4
Medtr2g104040 Medicago truncatula HOM05D007527 ORTHO05D009523 2.7e-10 69.3 58 62.1
vmacro16888 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 4.7e-10 68.6 52 63.5
vmacro16886 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.0e-09 67.4 50 74.0
Zm00001eb192090 Zea mays HOM05D007527 ORTHO05D009523 2.3e-09 66.2 78 42.3
Carub.0003s1564 Capsella rubella HOM05D007527 ORTHO05D009523 1.2e-08 63.9 112 37.5
CARHR091010 Cardamine hirsuta HOM05D007527 ORTHO05D009523 3.7e-07 58.9 64 46.9
Mapoly0006s0085 Marchantia polymorpha HOM05D007527 ORTHO05D009523 4.1e-06 55.5 66 45.5
Pp3c10_2350 Physcomitrium patens HOM05D007527 ORTHO05D009523 9.1e-06 54.3 52 50.0


User provided reference genes

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