Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.3e-199 699.5 349 100.0
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 8.5e-159 563.9 355 83.1
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 5.4e-81 305.4 262 63.0
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 8.7e-79 298.1 257 63.8
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 2.3e-71 273.5 251 56.6
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 6.9e-68 261.9 250 57.6
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 5.8e-67 258.8 297 49.8
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 7.1e-57 225.3 249 51.4
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 1.3e-55 221.1 243 53.1
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 3.0e-55 219.9 243 53.1
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.1e-52 209.9 249 52.2
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.0e-51 207.2 246 52.4
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.0e-50 204.9 200 52.0
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 2.9e-50 203.4 249 48.2
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 4.6e-48 196.1 253 45.1
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 1.1e-46 191.4 213 48.4
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 1.9e-46 190.7 263 42.2
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 9.7e-46 188.3 225 49.8
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 8.2e-45 185.3 260 45.4
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 2.4e-44 183.7 222 43.2
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 5.3e-44 182.6 248 44.0
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 2.6e-43 180.3 255 40.4
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.3e-42 177.9 178 51.7
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 3.8e-42 176.4 223 43.9
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 7.2e-41 172.2 222 42.8
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.7e-40 170.2 222 42.3
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 4.7e-40 169.5 222 42.3
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 3.9e-39 166.4 222 44.1
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 9.7e-38 161.8 260 42.3
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 4.8e-37 159.5 248 40.3
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 8.2e-37 158.7 215 43.3
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 1.8e-36 157.5 222 41.9
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.5e-35 154.5 242 40.9
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 1.5e-35 154.5 210 43.3
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 4.5e-35 152.9 235 43.0
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 4.5e-35 152.9 241 42.7
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 1.7e-34 151.0 263 38.0
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 2.5e-33 147.1 244 39.3
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 4.2e-33 146.4 242 41.3
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 1.4e-31 141.4 178 46.1
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 1.4e-31 141.4 178 46.1
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.4e-31 141.4 193 43.5
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 3.7e-29 133.3 181 43.6
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.4e-28 131.3 187 41.2
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 3.1e-28 130.2 165 45.5
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 4.1e-28 129.8 210 37.1
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 7.0e-28 129.0 173 44.5
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 2.6e-27 127.1 140 46.4
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 1.1e-25 121.7 177 41.2
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 2.5e-25 120.6 106 56.6
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 7.2e-25 119.0 246 39.0
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 9.4e-25 118.6 172 47.1
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 1.2e-24 118.2 158 48.1
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 8.0e-24 115.5 246 38.2
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.0e-23 115.2 115 49.6
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 3.0e-23 113.6 115 51.3
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 1.5e-22 111.3 173 41.6
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 2.0e-22 110.9 178 34.3
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 1.3e-21 108.2 163 37.4
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 3.8e-18 96.7 183 37.2
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 1.5e-14 84.7 185 34.1
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 3.1e-12 77.0 112 39.3
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 1.2e-11 75.1 106 41.5
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 3.3e-09 67.0 110 32.7
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 4.2e-09 66.6 51 58.8
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 1.6e-08 64.7 45 60.0


User provided reference genes

Program Settings