Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.0e-148 528.1 274 100.0
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.2e-64 248.4 159 86.2
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 4.6e-43 179.1 236 49.6
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.1e-42 175.6 224 52.7
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.8e-40 169.9 224 51.8
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.0e-29 134.8 152 57.9
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 5.1e-18 95.9 176 40.3
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 6.3e-16 89.0 211 37.0
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 3.1e-15 86.7 229 34.9
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 5.3e-15 85.9 229 34.5
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 1.2e-14 84.7 242 35.5
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 2.0e-14 84.0 151 43.7
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 2.9e-13 80.1 211 35.1
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 1.4e-12 77.8 218 35.8
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.6e-11 74.3 210 33.8
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.6e-11 74.3 202 34.7
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.7e-11 73.6 190 35.8
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.7e-11 72.8 171 39.2
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 7.9e-11 72.0 86 48.8
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 1.4e-10 71.2 95 50.5
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.4e-10 71.2 177 37.9
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 1.8e-10 70.9 183 36.6
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.8e-10 70.9 161 40.4
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 2.3e-10 70.5 142 38.7
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 3.0e-10 70.1 94 48.9
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 3.9e-10 69.7 83 50.6
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 5.1e-10 69.3 123 40.7
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 6.7e-10 68.9 86 51.2
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 8.8e-10 68.6 150 38.0
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.1e-09 68.2 77 51.9
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.5e-09 67.8 84 51.2
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.0e-09 67.4 117 43.6
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 2.6e-09 67.0 207 34.3
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 2.6e-09 67.0 215 30.7
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 2.6e-09 67.0 205 35.6
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 3.3e-09 66.6 139 36.0
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 4.4e-09 66.2 95 50.5
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.4e-09 66.2 117 43.6
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.4e-09 66.2 208 34.1
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 4.4e-09 66.2 193 33.7
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 4.4e-09 66.2 77 50.6
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 5.7e-09 65.9 222 31.1
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.4e-09 65.5 106 44.3
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.4e-09 65.5 72 52.8
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 7.4e-09 65.5 179 35.8
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 9.7e-09 65.1 117 37.6
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 9.7e-09 65.1 216 35.2
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.3e-08 64.7 70 54.3
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.7e-08 64.3 193 34.7
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 1.7e-08 64.3 207 31.4
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.2e-08 63.9 158 37.3
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 2.8e-08 63.5 41 78.0
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 3.7e-08 63.2 146 35.6
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 4.8e-08 62.8 230 31.7
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 6.3e-08 62.4 161 34.8
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 6.3e-08 62.4 151 39.1
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 6.3e-08 62.4 85 50.6
CSS0005854 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 8.2e-08 62.0 31 90.3
CSS0045473 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 8.2e-08 62.0 32 87.5
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 8.2e-08 62.0 98 45.9
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 1.1e-07 61.6 58 58.6
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.4e-07 61.2 193 34.2
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.4e-07 61.2 55 60.0
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 1.8e-07 60.8 196 33.2
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 2.4e-07 60.5 55 54.5
CSS0006021 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.4e-07 60.5 31 87.1
CSS0015727 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.4e-07 60.5 31 87.1
CSS0040714 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.4e-07 60.5 31 87.1
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 3.1e-07 60.1 160 32.5
CSS0001661 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.1e-07 60.1 31 83.9
CSS0014020 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.1e-07 60.1 31 83.9
CSS0037091 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.1e-07 60.1 31 87.1
CSS0037625 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.1e-07 60.1 31 83.9
CSS0045547 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.1e-07 60.1 31 83.9
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 3.1e-07 60.1 60 56.7
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 3.1e-07 60.1 196 31.1
CSS0015707 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.1e-07 59.7 40 67.5
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 4.1e-07 59.7 148 35.1
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 5.3e-07 59.3 52 55.8
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 5.3e-07 59.3 104 41.3
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 6.9e-07 58.9 55 52.7
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 6.9e-07 58.9 55 52.7
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 6.9e-07 58.9 55 52.7
CSS0002461 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.9e-07 58.9 31 83.9
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 6.9e-07 58.9 208 30.8
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 6.9e-07 58.9 38 76.3
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 9.1e-07 58.5 97 43.3
CSS0040191 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 9.1e-07 58.5 31 80.6
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 9.1e-07 58.5 58 56.9
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.2e-06 58.2 74 52.7
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-06 58.2 170 33.5
CSS0015439 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.2e-06 58.2 31 83.9
CSS0024341 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.2e-06 58.2 31 80.6
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.2e-06 58.2 104 39.4
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 1.5e-06 57.8 55 50.9
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 1.5e-06 57.8 52 61.5
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.0e-06 57.4 74 54.1
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.0e-06 57.4 74 54.1
CSS0042008 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.6e-06 57.0 31 80.6
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 3.4e-06 56.6 35 80.0
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 3.4e-06 56.6 55 58.2
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 3.4e-06 56.6 34 82.4
CSS0001613 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.5e-06 56.2 66 48.5
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 4.5e-06 56.2 35 80.0
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 4.5e-06 56.2 35 80.0
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 4.5e-06 56.2 35 80.0
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 4.5e-06 56.2 71 50.7
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 5.9e-06 55.8 55 61.8
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 5.9e-06 55.8 77 49.4


User provided reference genes

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