Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000420 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 1.8e-37 161.4 79 100.0
CSS0010405 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 2.3e-37 161.0 79 98.7
CSS0022172 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 2.9e-32 144.1 74 94.6
Dinv33449 Davidia involucrata HOM05D007358 ORTHO05D009117 6.9e-26 122.9 79 74.7
Hma1.2p1_0013F.1_g008830 Hydrangea macrophylla HOM05D007358 ORTHO05D009117 1.2e-25 122.1 79 75.9
Hma1.2p1_0013F.1_g008840 Hydrangea macrophylla HOM05D007358 ORTHO05D009117 1.2e-25 122.1 79 75.9
Actinidia06003 Actinidia chinensis HOM05D007358 ORTHO05D009117 3.4e-25 120.6 70 82.9
vmacro05457 Vaccinium macrocarpon HOM05D007358 ORTHO05D009117 7.7e-25 119.4 79 73.4
ClCG09G019220 Citrullus lanatus HOM05D007358 ORTHO05D009117 5.0e-24 116.7 79 69.6
CsaV3_5G027190 Cucumis sativus L. HOM05D007358 ORTHO05D009117 7.2e-23 112.8 79 65.8
Haze_14729 Corylus avellana HOM05D007358 ORTHO05D009117 2.7e-22 110.9 79 63.3
Sed0015079 Sechium edule HOM05D007358 ORTHO05D009117 2.7e-22 110.9 79 63.3
AUR62023937 Chenopodium quinoa HOM05D007358 ORTHO05D009117 6.1e-22 109.8 79 63.3
CANSAT64G1792 Cannabis sativa HOM05D007358 ORTHO05D009117 1.0e-21 109.0 79 62.0
Ah.01g004590 Amaranthus hybridus HOM05D007358 ORTHO05D009117 1.4e-21 108.6 74 67.6
Cfa007380 Carpinus fangiana HOM05D007358 ORTHO05D009117 1.4e-21 108.6 79 62.0
Lj2C1075G10 Lonicera japonica HOM05D007358 ORTHO05D009117 1.4e-21 108.6 79 65.8
Rhsim11G0131500 Rhododendron simsii HOM05D007358 ORTHO05D009117 1.8e-21 108.2 72 72.2
Sc03g0011070 Simmondsia chinensis HOM05D007358 ORTHO05D009117 3.0e-21 107.5 74 68.9
EL10Ac9g21083 Beta vulgaris HOM05D007358 ORTHO05D009117 3.9e-21 107.1 73 67.1
MD09G1028300 Malus domestica HOM05D007358 ORTHO05D009117 5.1e-21 106.7 80 63.8
CSS0028376 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 6.7e-21 106.3 53 94.3
Prupe.3G290200 Prunus persica HOM05D007358 ORTHO05D009117 8.8e-21 105.9 79 59.5
GSVIVG01008360001 Vitis vinifera HOM05D007358 ORTHO05D009117 1.1e-20 105.5 79 58.2
CiPaw.03G042400 Carya illinoinensis HOM05D007358 ORTHO05D009117 2.6e-20 104.4 79 58.2
Cc09_g03920 Coffea canephora HOM05D007358 ORTHO05D009117 2.6e-20 104.4 79 58.2
SGA_v2.0_scaffold122G33180 Striga asiatica HOM05D007358 ORTHO05D009117 4.4e-20 103.6 83 55.4
RcHm_v2.0_Chr2g0173011 Rosa chinensis HOM05D007358 ORTHO05D009117 5.7e-20 103.2 81 60.5
Hund17802 Selenicereus undatus HOM05D007358 ORTHO05D009117 9.7e-20 102.4 74 67.6
Ca_04155_v3 Cicer arietinum L. HOM05D007358 ORTHO05D009117 1.7e-19 101.7 79 62.0
TWI12G0702 Tripterygium wilfordii HOM05D007358 ORTHO05D009117 8.2e-19 99.4 79 55.7
Atru.BG.30.p Acer truncatum HOM05D007358 ORTHO05D009117 1.1e-18 99.0 79 59.5
Ciclev10018361m.g Citrus clementina HOM05D007358 ORTHO05D009117 1.4e-18 98.6 79 57.0
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 1.8e-18 98.2 79 54.4
HanXRQChr17g0537401 Helianthus annuus HOM05D007358 ORTHO05D009117 1.8e-18 98.2 78 55.1
Oeu037939.3 Olea europaea HOM05D007358 ORTHO05D009117 2.4e-18 97.8 81 54.3
MSTRG.8212 Avicennia marina HOM05D007358 ORTHO05D009117 3.1e-18 97.4 81 55.6
Medtr6g005000 Medicago truncatula HOM05D007358 ORTHO05D009117 3.1e-18 97.4 80 57.5
TPR.G14066 Trifolium pratense HOM05D007358 ORTHO05D009117 3.1e-18 97.4 80 57.5
Lsat_1_v5_gn_3_20581 Lactuca sativa HOM05D007358 ORTHO05D009117 4.1e-18 97.1 76 56.6
Nitab4.5_0004652g0010 Nicotiana tabacum HOM05D007358 ORTHO05D009117 4.1e-18 97.1 79 55.7
Nitab4.5_0000080g0200 Nicotiana tabacum HOM05D007358 ORTHO05D009117 5.3e-18 96.7 79 54.4
CAN.G108.28 Capsicum annuum HOM05D007358 ORTHO05D009117 9.1e-18 95.9 80 57.5
QL02p074974 Quercus lobata HOM05D007358 ORTHO05D009117 1.5e-17 95.1 80 58.8
Migut.F01873 Erythranthe guttata HOM05D007358 ORTHO05D009117 2.6e-17 94.4 83 50.6
PGSC0003DMG400009102 Solanum tuberosum HOM05D007358 ORTHO05D009117 2.6e-17 94.4 79 55.7
Eucgr.I01754 Eucalyptus grandis HOM05D007358 ORTHO05D009117 3.5e-17 94.0 78 57.7
Manes.17G021400 Manihot esculenta HOM05D007358 ORTHO05D009117 3.5e-17 94.0 79 51.9
FAN04G0278 Fragaria x ananassa HOM05D007358 ORTHO05D009117 4.5e-17 93.6 81 53.1
FAN04G1709 Fragaria x ananassa HOM05D007358 ORTHO05D009117 4.5e-17 93.6 81 53.1
VMungo0464G1987 Vigna mungo HOM05D007358 ORTHO05D009117 4.5e-17 93.6 83 50.6
Aa31LG9G1210 Aethionema arabicum HOM05D007358 ORTHO05D009117 7.7e-17 92.8 79 57.0
Cpa.g.sc108.57 Carica papaya HOM05D007358 ORTHO05D009117 7.7e-17 92.8 79 55.7
Sopen03g003350 Solanum pennellii HOM05D007358 ORTHO05D009117 1.0e-16 92.4 79 53.2
Phvul.004G009945 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.7e-16 91.7 83 48.2
Psat1g055280 Pisum sativum HOM05D007358 ORTHO05D009117 1.7e-16 91.7 79 55.7
SalBow6G1669 Salvia bowleyana HOM05D007358 ORTHO05D009117 1.7e-16 91.7 81 49.4
Solyc03g007390.4 Solanum lycopersicum HOM05D007358 ORTHO05D009117 1.7e-16 91.7 79 53.2
Lj2g0013463 Lotus japonicus HOM05D007358 ORTHO05D009117 3.8e-16 90.5 81 54.3
Potri.017G071600 Populus trichocarpa HOM05D007358 ORTHO05D009117 3.8e-16 90.5 79 53.2
C04p47210 Brassica napus HOM05D007358 ORTHO05D009117 6.5e-16 89.7 79 53.2
BolC4t26320H Brassica oleracea HOM05D007358 ORTHO05D009117 6.5e-16 89.7 79 53.2
Glyma.05G004200 Glycine max HOM05D007358 ORTHO05D009117 8.5e-16 89.4 83 48.2
DCAR_000707 Daucus carota HOM05D007358 ORTHO05D009117 1.1e-15 89.0 82 52.4
FvH4_5g31860 Fragaria vesca HOM05D007358 ORTHO05D009117 1.1e-15 89.0 81 51.9
QL06p022929 Quercus lobata HOM05D007358 ORTHO05D009117 1.1e-15 89.0 62 61.3
Phvul.003G017200 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.4e-15 88.6 83 48.2
Sabra17G0060800 Salix brachista HOM05D007358 ORTHO05D009117 1.4e-15 88.6 79 53.2
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.9e-15 88.2 83 47.0
COL.COLO4_29095 Corchorus olitorius HOM05D007358 ORTHO05D009117 2.5e-15 87.8 79 49.4
Phvul.004G009641 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 2.5e-15 87.8 83 47.0
Phvul.004G009809 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 2.5e-15 87.8 83 47.0
Lalb_Chr24g0394951 Lupinus albus HOM05D007358 ORTHO05D009117 4.2e-15 87.0 79 53.2
QL02p075081 Quercus lobata HOM05D007358 ORTHO05D009117 4.2e-15 87.0 62 61.3
Gohir.D11G070700 Gossypium hirsutum HOM05D007358 ORTHO05D009117 5.5e-15 86.7 77 48.1
Gorai.007G075800 Gossypium raimondii HOM05D007358 ORTHO05D009117 5.5e-15 86.7 77 48.1
Phvul.004G009900 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 9.4e-15 85.9 83 47.0
THA.LOC104805375 Tarenaya hassleriana HOM05D007358 ORTHO05D009117 1.2e-14 85.5 79 46.8
PGR142G1723 Punica granatum HOM05D007358 ORTHO05D009117 1.6e-14 85.1 78 50.0
Gohir.A11G066500 Gossypium hirsutum HOM05D007358 ORTHO05D009117 2.7e-14 84.3 76 47.4
MBI17_g07976_MAGBIO Magnolia biondii HOM05D007358 ORTHO05D009117 2.7e-14 84.3 79 54.4
A04p13440 Brassica napus HOM05D007358 ORTHO05D009117 3.6e-14 84.0 79 53.2
CARHR261620 Cardamine hirsuta HOM05D007358 ORTHO05D009117 4.7e-14 83.6 79 46.8
Thecc.04G015800 Theobroma cacao HOM05D007358 ORTHO05D009117 6.1e-14 83.2 77 49.4
BraA04t17002Z Brassica rapa HOM05D007358 ORTHO05D009117 1.0e-13 82.4 79 51.9
BcaB06g27500 Brassica carinata HOM05D007358 ORTHO05D009117 1.4e-13 82.0 78 51.3
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 1.8e-13 81.6 79 49.4
Carub.0007s3520 Capsella rubella HOM05D007358 ORTHO05D009117 5.2e-13 80.1 79 51.9
SHI16405 Sapria himalayana HOM05D007358 ORTHO05D009117 5.2e-13 80.1 80 47.5
AT5G40400 Arabidopsis thaliana HOM05D007358 ORTHO05D009117 6.7e-13 79.7 76 52.6
Nn2g12649 Nelumbo nucifera HOM05D007358 ORTHO05D009117 6.7e-13 79.7 79 45.6
Thhalv10027688m.g Eutrema salsugineum HOM05D007358 ORTHO05D009117 2.0e-12 78.2 76 50.0
AL7G49460 Arabidopsis lyrata HOM05D007358 ORTHO05D009117 2.6e-12 77.8 76 50.0
Sp7g01520 Schrenkiella parvula HOM05D007358 ORTHO05D009117 3.3e-12 77.4 80 47.5
CDE04G1234 Ceratophyllum demersum HOM05D007358 ORTHO05D009117 5.7e-12 76.6 79 44.3
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 4.2e-07 60.5 76 40.8
SEGI_31001 Sequoiadendron giganteum HOM05D007358 ORTHO05D009117 1.6e-06 58.5 82 35.4
Solyc04g079850.2 Solanum lycopersicum HOM05D007639 ORTHO05D009509 8.0e-06 56.2 75 41.3


User provided reference genes

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