Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 8.5e-114 413.7 209 100.0
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 7.0e-108 394.0 209 97.6
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 2.2e-90 335.9 199 83.9
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 7.2e-89 330.9 200 84.5
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 5.2e-87 324.7 199 79.4
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 3.4e-86 322.0 199 81.4
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 4.4e-86 321.6 199 79.4
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 4.4e-86 321.6 198 80.8
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 2.2e-85 319.3 203 77.3
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 2.2e-85 319.3 199 81.9
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 4.8e-85 318.2 199 79.9
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 1.8e-84 316.2 199 79.4
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 4.1e-84 315.1 203 76.8
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 7.0e-84 314.3 207 76.8
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 7.0e-84 314.3 207 76.8
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 9.1e-84 313.9 194 79.9
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 9.1e-84 313.9 196 80.6
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 1.2e-83 313.5 199 78.4
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 1.6e-83 313.2 204 77.0
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 2.0e-83 312.8 194 77.8
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 3.5e-83 312.0 206 77.2
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 4.5e-83 311.6 199 76.4
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 7.7e-83 310.8 200 76.5
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 2.3e-82 309.3 208 75.5
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 1.1e-81 307.0 209 73.7
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 1.1e-81 307.0 199 76.9
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 1.5e-81 306.6 194 78.9
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 3.3e-81 305.4 209 72.7
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 1.2e-80 303.5 205 75.6
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 1.2e-80 303.5 199 74.4
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 2.8e-80 302.4 207 72.0
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 3.6e-80 302.0 209 75.1
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 6.1e-80 301.2 209 73.2
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 8.0e-80 300.8 199 74.4
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 1.4e-79 300.1 209 71.8
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 1.8e-79 299.7 218 70.2
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 1.8e-79 299.7 199 73.4
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 4.0e-79 298.5 209 71.3
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 5.2e-79 298.1 209 71.3
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 6.8e-79 297.7 199 74.4
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 1.2e-78 297.0 209 70.8
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 1.5e-78 296.6 196 77.6
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.5e-78 296.6 209 70.8
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 2.0e-78 296.2 209 71.3
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.6e-78 295.8 199 72.4
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 4.4e-78 295.0 203 71.9
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 6.3e-77 291.2 204 72.1
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 6.3e-77 291.2 216 68.1
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 8.3e-77 290.8 201 71.6
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 2.4e-76 289.3 194 74.7
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 9.2e-76 287.3 203 70.4
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 3.5e-75 285.4 197 72.6
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 1.0e-74 283.9 199 71.4
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 1.7e-74 283.1 223 65.5
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.5e-73 280.0 197 69.0
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 7.3e-73 277.7 192 69.8
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 7.3e-73 277.7 198 65.2
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 1.2e-72 276.9 193 69.4
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 1.6e-72 276.6 192 68.8
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 2.1e-72 276.2 192 69.8
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 3.6e-72 275.4 192 69.3
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 4.7e-72 275.0 179 78.2
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 6.1e-72 274.6 193 67.4
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.4e-71 273.5 198 69.2
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 6.8e-71 271.2 193 69.4
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 2.6e-70 269.2 204 65.2
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 4.4e-70 268.5 180 76.1
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 7.5e-70 267.7 197 66.5
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 2.2e-69 266.2 228 60.1
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 8.3e-69 264.2 168 76.2
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 4.1e-68 261.9 199 63.8
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.6e-67 260.0 191 67.0
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 3.5e-67 258.8 192 66.7
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 6.0e-67 258.1 201 64.7
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 3.3e-65 252.3 192 64.1
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 3.6e-64 248.8 199 64.3
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 7.5e-62 241.1 194 61.9
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 9.8e-62 240.7 193 64.2
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 1.7e-61 240.0 193 64.8
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 4.1e-60 235.3 159 71.7
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 1.3e-58 230.3 160 70.6
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 1.6e-56 223.4 201 57.2
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 1.4e-55 220.3 191 56.5
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 4.9e-53 211.8 155 68.4
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 1.3e-50 203.8 129 74.4
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 1.3e-50 203.8 129 74.4
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 2.5e-49 199.5 142 73.9
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 1.6e-48 196.8 124 76.6
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.1e-48 196.4 134 70.1
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 1.4e-44 183.7 199 51.3
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 3.2e-44 182.6 129 69.8
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 3.0e-42 176.0 167 59.3
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 8.7e-42 174.5 182 49.5
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 2.4e-39 166.4 168 52.4
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 2.4e-36 156.4 188 42.6
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 5.1e-34 148.7 197 42.6
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 9.6e-33 144.4 193 39.9
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 2.4e-31 139.8 134 53.7
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.2e-30 137.5 176 48.9
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 9.9e-30 134.4 140 47.1
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 4.6e-27 125.6 109 58.7
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 5.1e-26 122.1 62 90.3
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 1.3e-24 117.5 163 44.2
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 1.3e-24 117.5 79 73.4
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 1.0e-21 107.8 81 67.9
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.3e-21 107.5 69 73.9
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.3e-21 107.5 93 63.4
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 3.0e-18 96.3 110 56.4
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 4.3e-17 92.4 65 66.2
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 7.4e-17 91.7 163 36.8
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 2.8e-16 89.7 87 50.6
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 1.5e-14 84.0 199 30.2
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 1.3e-10 70.9 47 72.3
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 1.8e-10 70.5 39 74.4
AagrBONN_evm.TU.Sc2ySwM_362.2804 Anthoceros agrestis HOM05D006956 ORTHO05D008824 2.0e-06 57.0 67 43.3
MCO02G468 Micromonas commoda HOM05D006956 ORTHO05D008824 1.0e-05 54.7 85 40.0


User provided reference genes

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