Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000378 Camellia sinensis var. sinensis HOM05D001402 ORTHO05D001302 3.9e-108 394.8 199 100.0
CSS0023465 Camellia sinensis var. sinensis HOM05D001402 ORTHO05D001302 3.1e-65 252.3 130 99.2
Dinv28836 Davidia involucrata HOM05D001402 ORTHO05D001302 3.2e-38 162.5 151 64.9
Actinidia09457 Actinidia chinensis HOM05D001402 ORTHO05D001302 1.2e-24 117.5 133 56.4
Actinidia23769 Actinidia chinensis HOM05D001402 ORTHO05D001302 1.5e-22 110.5 132 51.5
Peaxi162Scf00487g00313 Petunia axillaris HOM05D001402 ORTHO05D001302 7.3e-22 108.2 132 54.5
vmacro14717 Vaccinium macrocarpon HOM05D001402 ORTHO05D001302 2.1e-21 106.7 147 46.9
PGSC0003DMG402008726 Solanum tuberosum HOM05D001402 ORTHO05D001302 3.6e-21 105.9 134 54.5
Lj2A1121G81 Lonicera japonica HOM05D001402 ORTHO05D001302 1.4e-20 104.0 138 47.1
Rhsim01G0250500 Rhododendron simsii HOM05D001402 ORTHO05D001302 2.3e-20 103.2 137 48.2
Hma1.2p1_1234F.1_g269010 Hydrangea macrophylla HOM05D001402 ORTHO05D001302 4.0e-20 102.4 141 46.8
Solyc09g057580.4 Solanum lycopersicum HOM05D001402 ORTHO05D001302 6.8e-20 101.7 133 51.9
Sopen09g021000 Solanum pennellii HOM05D001402 ORTHO05D001302 6.8e-20 101.7 134 53.7
Duzib133G1202 Durio zibethinus HOM05D001402 ORTHO05D001302 5.7e-19 98.6 141 44.0
Thecc.01G215800 Theobroma cacao HOM05D001402 ORTHO05D001302 5.7e-19 98.6 141 45.4
Oeu033332.1 Olea europaea HOM05D001402 ORTHO05D001302 7.5e-19 98.2 137 47.4
CsaV3_7G026300 Cucumis sativus L. HOM05D001402 ORTHO05D001302 2.2e-18 96.7 130 45.4
Nitab4.5_0005269g0010 Nicotiana tabacum HOM05D001402 ORTHO05D001302 2.2e-18 96.7 134 48.5
Nitab4.5_0000403g0130 Nicotiana tabacum HOM05D001402 ORTHO05D001302 8.3e-18 94.7 136 48.5
Ciclev10031774m.g Citrus clementina HOM05D001402 ORTHO05D001302 1.1e-17 94.4 136 49.3
arahy.Tifrunner.gnm1.ann1.ZHJA83 Arachis hypogaea HOM05D000015 ORTHO05D000984 1.4e-17 94.0 88 59.1
ClCG09G008680 Citrullus lanatus HOM05D001402 ORTHO05D001302 1.8e-17 93.6 133 45.1
CAN.G173.10 Capsicum annuum HOM05D001402 ORTHO05D001302 2.4e-17 93.2 123 47.2
Dinv30668 Davidia involucrata HOM05D001402 ORTHO05D001302 2.4e-17 93.2 139 48.9
Dinv34328 Davidia involucrata HOM05D001402 ORTHO05D001302 2.4e-17 93.2 139 48.9
Nn1g08170 Nelumbo nucifera HOM05D001402 ORTHO05D001302 4.1e-17 92.4 150 44.7
Eucgr.H00754 Eucalyptus grandis HOM05D001402 ORTHO05D001302 5.4e-17 92.0 83 56.6
Glyma.16G088400 Glycine max HOM05D001402 ORTHO05D001302 5.4e-17 92.0 82 61.0
Manes.13G051700 Manihot esculenta HOM05D001402 ORTHO05D001302 5.4e-17 92.0 137 49.6
DCAR_004747 Daucus carota HOM05D001402 ORTHO05D001302 1.2e-16 90.9 82 58.5
Sed0017663 Sechium edule HOM05D001402 ORTHO05D001302 1.2e-16 90.9 135 45.2
Gohir.D11G147000 Gossypium hirsutum HOM05D001402 ORTHO05D001302 1.6e-16 90.5 136 44.1
Gorai.007G157400 Gossypium raimondii HOM05D001402 ORTHO05D001302 1.6e-16 90.5 136 44.1
Peaxi162Scf00761g00018 Petunia axillaris HOM05D001402 ORTHO05D001302 1.6e-16 90.5 120 47.5
SGA_v2.0_scaffold156G37279 Striga asiatica HOM05D001402 ORTHO05D001302 2.0e-16 90.1 130 43.1
MSTRG.17983 Avicennia marina HOM05D001402 ORTHO05D001302 2.7e-16 89.7 85 57.6
Gohir.A11G140500 Gossypium hirsutum HOM05D001402 ORTHO05D001302 2.7e-16 89.7 146 43.2
Phvul.010G023700 Phaseolus vulgaris HOM05D001402 ORTHO05D001302 4.6e-16 89.0 82 58.5
COL.COLO4_16119 Corchorus olitorius HOM05D001402 ORTHO05D001302 7.8e-16 88.2 141 44.7
Glyma.03G085900 Glycine max HOM05D001402 ORTHO05D001302 7.8e-16 88.2 82 58.5
VMungo0331G0917 Vigna mungo HOM05D001402 ORTHO05D001302 7.8e-16 88.2 74 60.8
Cc01_g16470 Coffea canephora HOM05D001402 ORTHO05D001302 1.3e-15 87.4 136 41.9
arahy.Tifrunner.gnm1.ann1.WPBC77 Arachis hypogaea HOM05D000015 ORTHO05D000984 2.3e-15 86.7 76 61.8
Duzib138G1118 Durio zibethinus HOM05D001402 ORTHO05D001302 2.3e-15 86.7 141 45.4
Manes.12G050300 Manihot esculenta HOM05D001402 ORTHO05D001302 3.9e-15 85.9 130 50.0
Potri.002G247700 Populus trichocarpa HOM05D001402 ORTHO05D001302 3.9e-15 85.9 142 45.1
FAN27G3269 Fragaria x ananassa HOM05D001402 ORTHO05D001302 5.0e-15 85.5 74 59.5
Lj1g0017192 Lotus japonicus HOM05D001402 ORTHO05D001302 6.6e-15 85.1 151 39.7
Glyma.08G346900 Glycine max HOM05D001402 ORTHO05D001302 1.5e-14 84.0 68 63.2
Prupe.8G195000 Prunus persica HOM05D001402 ORTHO05D001302 1.9e-14 83.6 84 53.6
FAN15G1183 Fragaria x ananassa HOM05D001402 ORTHO05D001302 2.5e-14 83.2 133 43.6
FAN15G1519 Fragaria x ananassa HOM05D001402 ORTHO05D001302 2.5e-14 83.2 133 43.6
FAN15G2328 Fragaria x ananassa HOM05D001402 ORTHO05D001302 2.5e-14 83.2 133 43.6
Glyma.18G158300 Glycine max HOM05D001402 ORTHO05D001302 3.3e-14 82.8 68 61.8
FvH4_2g18230 Fragaria vesca HOM05D001402 ORTHO05D001302 4.3e-14 82.4 133 43.6
FAN24G2984 Fragaria x ananassa HOM05D001402 ORTHO05D001302 4.3e-14 82.4 133 43.6
Psat4g204600 Pisum sativum HOM05D001402 ORTHO05D001302 4.3e-14 82.4 74 58.1
TPR.G16681 Trifolium pratense HOM05D001402 ORTHO05D001302 4.3e-14 82.4 133 40.6
SalBow6G3499 Salvia bowleyana HOM05D001402 ORTHO05D001302 5.6e-14 82.0 141 39.7
VMungo1383G0312 Vigna mungo HOM05D001402 ORTHO05D001302 7.3e-14 81.6 85 50.6
Medtr8g012420 Medicago truncatula HOM05D001402 ORTHO05D001302 9.5e-14 81.3 74 60.8
Sabra02G0188500 Salix brachista HOM05D001402 ORTHO05D001302 9.5e-14 81.3 145 44.8
CANSAT01G0063 Cannabis sativa HOM05D001402 ORTHO05D001302 1.2e-13 80.9 135 42.2
Ca_23212_v3 Cicer arietinum L. HOM05D001402 ORTHO05D001302 1.2e-13 80.9 86 52.3
RcHm_v2.0_Chr6g0283591 Rosa chinensis HOM05D001402 ORTHO05D001302 1.2e-13 80.9 132 40.2
CANSAT01G1691 Cannabis sativa HOM05D001402 ORTHO05D001302 1.6e-13 80.5 135 42.2
Lj3g0006669 Lotus japonicus HOM05D001402 ORTHO05D001302 2.1e-13 80.1 79 57.0
THA.LOC104818981 Tarenaya hassleriana HOM05D001402 ORTHO05D001302 2.8e-13 79.7 85 54.1
Haze_03343 Corylus avellana HOM05D001402 ORTHO05D001302 3.6e-13 79.3 89 53.9
Sp3g06260 Schrenkiella parvula HOM05D001402 ORTHO05D001302 4.7e-13 79.0 87 51.7
CiPaw.14G040400 Carya illinoinensis HOM05D001402 ORTHO05D001302 6.2e-13 78.6 83 55.4
MD10G1156700 Malus domestica HOM05D001402 ORTHO05D001302 8.0e-13 78.2 85 50.6
PSO063G5544 Papaver somniferum HOM05D001402 ORTHO05D001302 1.4e-12 77.4 160 39.4
MBI07_g25973_MAGBIO Magnolia biondii HOM05D001402 ORTHO05D001302 1.8e-12 77.0 68 55.9
AL3G18610 Arabidopsis lyrata HOM05D001402 ORTHO05D001302 2.3e-12 76.6 87 50.6
CARHR081960 Cardamine hirsuta HOM05D001402 ORTHO05D001302 2.3e-12 76.6 134 39.6
THA.LOC104822482 Tarenaya hassleriana HOM05D001402 ORTHO05D001302 2.3e-12 76.6 79 58.2
Lsat_1_v5_gn_5_177800 Lactuca sativa HOM05D001402 ORTHO05D001302 3.1e-12 76.3 71 57.7
MD05G1166700 Malus domestica HOM05D001402 ORTHO05D001302 3.1e-12 76.3 85 49.4
Nitab4.5_0002167g0030 Nicotiana tabacum HOM05D001402 ORTHO05D001302 3.1e-12 76.3 135 37.8
Aa31LG5G17880 Aethionema arabicum HOM05D001402 ORTHO05D001302 4.0e-12 75.9 86 52.3
Phvul.008G142100 Phaseolus vulgaris HOM05D001402 ORTHO05D001302 6.8e-12 75.1 68 55.9
QL09p049505 Quercus lobata HOM05D001402 ORTHO05D001302 8.9e-12 74.7 64 64.1
A05p40890 Brassica napus HOM05D001402 ORTHO05D001302 1.2e-11 74.3 134 40.3
Thhalv10020977m.g Eutrema salsugineum HOM05D001402 ORTHO05D001302 1.5e-11 73.9 87 49.4
Atru.chr6.1450 Acer truncatum HOM05D001402 ORTHO05D001302 2.0e-11 73.6 89 53.9
Carub.0003s0685 Capsella rubella HOM05D001402 ORTHO05D001302 2.0e-11 73.6 87 49.4
C05p59990 Brassica napus HOM05D001402 ORTHO05D001302 2.6e-11 73.2 134 41.0
BolC5t34654H Brassica oleracea HOM05D001402 ORTHO05D001302 2.6e-11 73.2 134 41.0
HanXRQChr01g0016301 Helianthus annuus HOM05D001402 ORTHO05D001302 2.6e-11 73.2 140 40.7
PSO017G5238 Papaver somniferum HOM05D001402 ORTHO05D001302 3.4e-11 72.8 163 35.6
Lalb_Chr19g0125931 Lupinus albus HOM05D001402 ORTHO05D001302 4.4e-11 72.4 133 36.8
BraA05t22818Z Brassica rapa HOM05D001402 ORTHO05D001302 5.8e-11 72.0 134 39.6
Cpa.g.sc8.116 Carica papaya HOM05D001402 ORTHO05D001302 5.8e-11 72.0 75 53.3
CDE07G0576 Ceratophyllum demersum HOM05D001402 ORTHO05D001302 7.5e-11 71.6 122 37.7
ECA248G0789 Erigeron canadensis HOM05D001402 ORTHO05D001302 7.5e-11 71.6 84 52.4
Migut.D02487 Erythranthe guttata HOM05D001402 ORTHO05D001302 1.7e-10 70.5 182 31.3
Ah.08g214820 Amaranthus hybridus HOM05D001402 ORTHO05D001302 3.7e-10 69.3 145 35.2
Sp2g18950 Schrenkiella parvula HOM05D001402 ORTHO05D001302 3.7e-10 69.3 132 37.1
BcaB04g21295 Brassica carinata HOM05D001402 ORTHO05D001302 8.3e-10 68.2 134 38.8
TWI18G1005 Tripterygium wilfordii HOM05D001402 ORTHO05D001302 8.3e-10 68.2 135 39.3
Carub.0008s0822 Capsella rubella HOM05D001402 ORTHO05D001302 1.1e-09 67.8 130 39.2
Aqoxy2G03922 Aquilegia oxysepala HOM05D001402 ORTHO05D001302 1.4e-09 67.4 149 32.9
BraA06t26819Z Brassica rapa HOM05D001402 ORTHO05D001302 1.4e-09 67.4 118 39.0
AL43U10050 Arabidopsis lyrata HOM05D001402 ORTHO05D001302 1.9e-09 67.0 130 37.7
AL8G21580 Arabidopsis lyrata HOM05D001402 ORTHO05D001302 1.9e-09 67.0 130 37.7
BcaC06g30778 Brassica carinata HOM05D001402 ORTHO05D001302 1.9e-09 67.0 83 47.0
A06p39060 Brassica napus HOM05D001402 ORTHO05D001302 1.9e-09 67.0 83 45.8
BolC1t05555H Brassica oleracea HOM05D001402 ORTHO05D001302 1.9e-09 67.0 85 44.7
AT5G48590 Arabidopsis thaliana HOM05D001402 ORTHO05D001302 2.4e-09 66.6 87 44.8
BolC7t44448H Brassica oleracea HOM05D001402 ORTHO05D001302 2.4e-09 66.6 83 45.8
BcaC06g30777 Brassica carinata HOM05D001402 ORTHO05D001302 3.2e-09 66.2 118 39.0
Hund18458 Selenicereus undatus HOM05D001402 ORTHO05D001302 3.2e-09 66.2 65 53.8
BNapus_Darmor_BZH_scaffold_109p00100 Brassica napus HOM05D001402 ORTHO05D001302 5.4e-09 65.5 85 43.5
BraA01t04386Z Brassica rapa HOM05D001402 ORTHO05D001302 5.4e-09 65.5 85 43.5
C07p39280 Brassica napus HOM05D001402 ORTHO05D001302 7.0e-09 65.1 83 44.6
ATR0561G010 Amborella trichopoda HOM05D001402 ORTHO05D001302 9.2e-09 64.7 128 35.9
Sc17g0001940 Simmondsia chinensis HOM05D001402 ORTHO05D001302 3.5e-08 62.8 65 55.4
EL10Ac7g17944 Beta vulgaris HOM05D001402 ORTHO05D001302 6.0e-08 62.0 71 52.1
Thhalv10004513m.g Eutrema salsugineum HOM05D001402 ORTHO05D001302 1.0e-07 61.2 83 42.2
CARHR291970 Cardamine hirsuta HOM05D001402 ORTHO05D001302 1.3e-07 60.8 83 41.0
CAN.G181.30 Capsicum annuum HOM05D001402 ORTHO05D001302 3.0e-07 59.7 112 36.6
AUR62016521 Chenopodium quinoa HOM05D001402 ORTHO05D001302 3.0e-07 59.7 123 35.8
Os11g0456100 Oryza sativa ssp. japonica HOM05D001402 ORTHO05D001302 3.9e-07 59.3 114 34.2
HPP92_023183 Vanilla planifolia HOM05D001402 ORTHO05D001302 6.6e-07 58.5 104 36.5
AUR62001155 Chenopodium quinoa HOM05D001402 ORTHO05D001302 2.5e-06 56.6 63 49.2
Zm00001eb169990 Zea mays HOM05D001402 ORTHO05D001302 5.6e-06 55.5 76 42.1


User provided reference genes

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