Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 4.6e-45 184.1 88 100.0
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 4.5e-40 167.5 84 94.0
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 4.2e-38 161.0 83 94.0
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 5.4e-38 160.6 83 94.0
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 6.7e-36 153.7 83 89.2
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 5.6e-35 150.6 83 86.7
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 1.4e-33 146.0 83 84.3
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 3.1e-33 144.8 87 80.5
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 2.0e-32 142.1 83 83.1
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 2.6e-32 141.7 81 81.5
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 3.4e-32 141.4 83 83.1
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 3.4e-32 141.4 81 84.0
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 3.4e-32 141.4 83 81.9
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 1.3e-31 139.4 81 81.5
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 1.3e-31 139.4 83 79.5
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 2.9e-31 138.3 83 78.3
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 3.8e-31 137.9 83 78.3
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 3.8e-31 137.9 82 76.8
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 6.4e-31 137.1 83 78.3
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 8.4e-31 136.7 83 80.7
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 8.4e-31 136.7 83 78.3
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 1.1e-30 136.3 81 77.8
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 1.4e-30 136.0 81 80.2
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 1.4e-30 136.0 81 80.2
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 1.9e-30 135.6 81 79.0
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 2.5e-30 135.2 81 79.0
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 2.5e-30 135.2 81 77.8
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 2.5e-30 135.2 83 75.9
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 3.2e-30 134.8 81 77.8
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 4.2e-30 134.4 83 75.9
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 5.5e-30 134.0 83 77.1
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 5.5e-30 134.0 81 77.8
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 7.1e-30 133.7 83 75.9
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 7.1e-30 133.7 80 80.0
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 9.3e-30 133.3 81 77.8
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 9.3e-30 133.3 81 77.8
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 9.3e-30 133.3 83 75.9
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 9.3e-30 133.3 81 77.8
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.2e-29 132.9 81 76.5
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 1.6e-29 132.5 83 75.9
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 2.1e-29 132.1 81 76.5
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 2.1e-29 132.1 83 74.7
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 2.7e-29 131.7 81 77.8
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 3.5e-29 131.3 81 74.1
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 3.5e-29 131.3 81 79.0
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 4.6e-29 131.0 81 79.0
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 4.6e-29 131.0 83 74.7
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 4.6e-29 131.0 83 74.7
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 4.6e-29 131.0 81 75.3
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 6.0e-29 130.6 81 76.5
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 6.0e-29 130.6 72 84.7
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 6.0e-29 130.6 81 79.0
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 6.0e-29 130.6 95 69.5
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 6.0e-29 130.6 81 76.5
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 7.9e-29 130.2 81 76.5
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 7.9e-29 130.2 81 75.3
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 7.9e-29 130.2 81 75.3
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 1.0e-28 129.8 78 76.9
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 1.0e-28 129.8 83 75.9
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 1.0e-28 129.8 81 75.3
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.3e-28 129.4 86 73.3
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 1.3e-28 129.4 81 76.5
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 1.3e-28 129.4 81 77.8
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 1.3e-28 129.4 74 81.1
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 1.8e-28 129.0 83 73.5
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 1.8e-28 129.0 74 81.1
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 2.3e-28 128.6 81 72.8
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 2.3e-28 128.6 81 77.8
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 2.3e-28 128.6 83 73.5
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 3.0e-28 128.3 80 77.5
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.0e-28 128.3 81 74.1
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 3.9e-28 127.9 126 57.1
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 3.9e-28 127.9 74 81.1
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 6.7e-28 127.1 72 83.3
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 6.7e-28 127.1 73 82.2
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 6.7e-28 127.1 73 82.2
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 6.7e-28 127.1 73 82.2
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 6.7e-28 127.1 73 82.2
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 6.7e-28 127.1 72 81.9
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 8.7e-28 126.7 81 72.8
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 1.1e-27 126.3 83 71.1
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.9e-27 125.6 74 79.7
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 1.9e-27 125.6 74 79.7
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 1.9e-27 125.6 74 79.7
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 1.9e-27 125.6 74 79.7
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 1.9e-27 125.6 80 75.0
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 2.5e-27 125.2 74 79.7
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.5e-27 125.2 81 71.6
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 3.3e-27 124.8 72 81.9
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 3.3e-27 124.8 74 79.7
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 3.3e-27 124.8 74 79.7
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 4.3e-27 124.4 86 70.9
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 4.3e-27 124.4 70 84.3
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 4.3e-27 124.4 81 71.6
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 5.6e-27 124.0 74 79.7
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 5.6e-27 124.0 83 72.3
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 7.4e-27 123.6 72 80.6
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 9.6e-27 123.2 84 70.2
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 2.1e-26 122.1 73 79.5
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.1e-26 122.1 81 70.4
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 2.1e-26 122.1 71 78.9
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 2.1e-26 122.1 83 69.9
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.8e-26 121.7 81 70.4
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 4.8e-26 120.9 83 71.1
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 6.2e-26 120.6 76 73.7
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 6.2e-26 120.6 82 70.7
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 6.2e-26 120.6 83 67.5
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 1.8e-25 119.0 74 74.3
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 2.4e-25 118.6 75 76.0
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 2.4e-25 118.6 83 67.5
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 3.1e-25 118.2 71 78.9
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 3.1e-25 118.2 81 69.1
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 4.0e-25 117.9 70 81.4
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 6.9e-25 117.1 79 72.2
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 1.2e-24 116.3 71 78.9
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 2.0e-24 115.5 71 76.1
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 4.5e-24 114.4 81 67.9
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 7.6e-24 113.6 81 65.4
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.7e-23 112.5 65 81.5
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 2.2e-23 112.1 64 81.2
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 1.1e-22 109.8 70 77.1
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 1.4e-22 109.4 63 81.0
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 4.2e-22 107.8 81 66.7
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 4.6e-21 104.4 81 64.2
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 6.1e-21 104.0 81 69.1
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 1.8e-20 102.4 70 70.0
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 2.3e-20 102.1 58 82.8
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 6.7e-20 100.5 83 65.1
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 7.4e-19 97.1 83 59.0
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 4.8e-18 94.4 56 80.4
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 4.8e-18 94.4 58 75.9
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 6.3e-18 94.0 89 56.2
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 1.1e-17 93.2 73 60.3
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 1.1e-17 93.2 73 65.8
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 1.2e-16 89.7 73 57.5
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 1.5e-16 89.4 70 60.0
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 2.2e-15 85.5 69 58.0
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 7.2e-14 80.5 48 79.2
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.6e-13 79.3 45 82.2
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 4.6e-13 77.8 49 73.5
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 1.0e-12 76.6 58 63.8
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 2.3e-12 75.5 52 71.2
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 2.0e-11 72.4 47 72.3
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 2.0e-11 72.4 72 51.4
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 3.3e-11 71.6 77 48.1
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 3.3e-11 71.6 75 49.3
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 1.1e-09 66.6 46 69.6
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.2e-08 63.2 37 81.1
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 2.9e-07 58.5 69 39.1


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