Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000358 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 4.5e-129 464.5 226 100.0
CSS0021225 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.1e-119 433.3 213 98.1
CSS0048041 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.8e-118 428.7 212 97.2
CSS0001814 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 6.3e-115 417.5 202 99.0
CSS0024445 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.2e-113 413.3 200 99.0
CSS0005669 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 5.2e-109 397.9 256 79.7
vmacro17519 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 2.6e-84 315.8 183 76.5
CSS0023474 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.2e-65 253.8 126 100.0
CSS0020961 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 3.5e-65 252.3 127 97.6
CSS0037350 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.8e-64 250.0 125 98.4
CSS0042035 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.9e-63 246.5 126 97.6
CSS0007770 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.3e-59 233.8 126 92.9
CSS0033495 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 3.1e-53 212.6 126 84.9
vmacro14705 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 2.9e-51 206.1 142 69.0
Rhsim06G0168100 Rhododendron simsii HOM05D023412 ORTHO05D013042 4.4e-31 139.0 190 40.0
Rhsim06G0168300 Rhododendron simsii HOM05D023412 ORTHO05D013042 4.4e-31 139.0 190 40.0
Rhsim06G0168500 Rhododendron simsii HOM05D023412 ORTHO05D013042 4.4e-31 139.0 190 40.0
Rhsim06G0068600 Rhododendron simsii HOM05D023412 ORTHO05D013042 1.6e-28 130.6 182 40.7
vmacro14522 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 3.2e-26 122.9 83 69.9
Rhsim03G0113200 Rhododendron simsii HOM05D023412 ORTHO05D013042 2.8e-22 109.8 177 35.0
COL.COLO4_06890 Corchorus olitorius HOM05D059189 ORTHO05D013042 1.2e-15 87.8 132 34.1
COL.COLO4_35865 Corchorus olitorius HOM05D059189 ORTHO05D013042 2.6e-15 86.7 199 29.1
CSS0020132 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 7.2e-10 68.6 34 100.0
CSS0028285 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 1.8e-08 63.9 69 55.1
CSS0041865 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 2.3e-08 63.5 69 56.5
CSS0011271 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 5.2e-08 62.4 34 91.2
CSS0036266 Camellia sinensis var. sinensis HOM05D001225 ORTHO05D001252 5.2e-08 62.4 58 62.1
vmacro14229 Vaccinium macrocarpon HOM05D000201 ORTHO05D000490 5.2e-08 62.4 54 59.3
CSS0001770 Camellia sinensis var. sinensis HOM05D001225 ORTHO05D001252 8.8e-08 61.6 58 62.1
CSS0027850 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 5.7e-07 58.9 88 43.2
CSS0039329 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 1.7e-06 57.4 74 48.6


User provided reference genes

Program Settings