Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.2e-183 647.1 541 100.0
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.4e-176 623.6 541 94.3
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 1.6e-55 221.5 526 57.4
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 2.6e-53 214.2 556 63.1
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 5.9e-50 203.0 149 69.1
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 1.3e-49 201.8 165 57.6
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 3.7e-44 183.7 533 58.7
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 5.5e-40 169.9 151 54.3
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 9.4e-40 169.1 443 67.3
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 6.1e-39 166.4 507 60.6
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 2.3e-38 164.5 168 46.4
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 6.7e-38 162.9 506 60.5
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 1.2e-37 162.2 168 48.8
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.7e-36 158.3 171 48.5
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 2.8e-36 157.5 522 55.0
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 1.6e-34 151.8 539 54.7
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 5.0e-33 146.7 456 58.3
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 6.5e-33 146.4 138 50.0
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 6.5e-33 146.4 136 51.5
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 8.5e-33 146.0 527 46.3
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 1.5e-32 145.2 542 53.7
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 3.2e-32 144.1 450 62.0
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 5.5e-32 143.3 530 56.2
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 1.4e-30 138.7 140 51.4
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 1.8e-30 138.3 531 55.4
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 4.0e-30 137.1 437 60.2
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 6.8e-30 136.3 539 50.3
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 2.6e-29 134.4 507 56.4
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 4.4e-29 133.7 140 50.0
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 1.7e-28 131.7 470 55.1
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 4.1e-27 127.1 461 58.6
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 3.5e-26 124.0 490 60.2
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 5.9e-26 123.2 145 44.8
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 5.9e-26 123.2 145 44.8
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 7.7e-26 122.9 432 62.7
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 1.0e-25 122.5 460 59.3
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.3e-25 122.1 432 60.4
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 2.3e-25 121.3 159 41.5
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 2.9e-25 120.9 137 43.8
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 1.1e-24 119.0 152 40.1
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 4.2e-24 117.1 149 39.6
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 1.2e-23 115.5 171 36.8
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 2.8e-23 114.4 139 43.2
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 1.0e-22 112.5 162 35.8
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.4e-22 112.1 432 59.5
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.8e-22 111.7 131 45.8
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 1.8e-22 111.7 439 56.7
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 6.8e-22 109.8 454 46.9
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 1.5e-21 108.6 438 58.4
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 3.4e-21 107.5 145 36.6
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 4.4e-21 107.1 474 54.4
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 1.3e-20 105.5 165 38.8
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 1.1e-19 102.4 161 34.2
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 1.1e-19 102.4 164 34.1
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 4.1e-19 100.5 151 37.1
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 7.8e-18 96.3 184 38.6
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 7.8e-18 96.3 510 57.8
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 1.7e-17 95.1 140 36.4
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 2.3e-17 94.7 137 35.8
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 9.5e-16 89.4 140 40.7
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 2.8e-15 87.8 99 42.4
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 4.7e-15 87.0 89 48.3
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 6.1e-15 86.7 366 63.7
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 8.0e-15 86.3 149 38.3
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 1.0e-14 85.9 80 52.5
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 4.0e-14 84.0 72 52.8
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 4.0e-14 84.0 137 32.8
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 4.4e-13 80.5 74 51.4
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 5.8e-13 80.1 139 37.4
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 4.9e-12 77.0 88 43.2
HPP92_024978 Vanilla planifolia HOM05D007752 ORTHO05D009994 6.4e-12 76.6 88 43.2
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 1.4e-11 75.5 75 46.7
Cpa.g.sc7.128 Carica papaya HOM05D007145 ORTHO05D008952 4.6e-10 70.5 144 31.2
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 7.8e-10 69.7 173 34.7
Os03g0336000 Oryza sativa ssp. japonica HOM05D007752 ORTHO05D009994 6.6e-09 66.6 87 34.5
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 8.6e-09 66.2 168 26.8
HPP92_021332 Vanilla planifolia HOM05D007212 ORTHO05D000003 1.9e-08 65.1 159 28.9
CAN.G479.71 Capsicum annuum HOM05D007173 ORTHO05D009151 2.5e-08 64.7 159 28.3
CDE04G1037 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 7.3e-08 63.2 87 35.6
Sp3g30160 Schrenkiella parvula HOM05D005287 ORTHO05D006893 9.5e-08 62.8 133 29.3
MELO3C009102.2 Cucumis melo HOM05D007752 ORTHO05D009994 2.1e-07 61.6 84 45.2
A07p04270 Brassica napus HOM05D005287 ORTHO05D006893 2.8e-07 61.2 131 31.3
BraA07t28218Z Brassica rapa HOM05D005287 ORTHO05D006893 2.8e-07 61.2 131 31.3
TWI31G0517 Tripterygium wilfordii HOM05D006858 ORTHO05D008767 2.8e-07 61.2 146 27.4
ECA233G6190 Erigeron canadensis HOM05D007145 ORTHO05D008952 6.2e-07 60.1 144 28.5
EL10Ac6g14755 Beta vulgaris HOM05D000249 ORTHO05D000206 8.0e-07 59.7 167 25.7
BcaC06g36186 Brassica carinata HOM05D005287 ORTHO05D006893 8.0e-07 59.7 131 28.2
C07p06750 Brassica napus HOM05D005287 ORTHO05D006893 8.0e-07 59.7 131 28.2
BolC7t41098H Brassica oleracea HOM05D005287 ORTHO05D006893 8.0e-07 59.7 131 28.2
Sopen09g024780 Solanum pennellii HOM05D006556 ORTHO05D008146 8.0e-07 59.7 123 29.3
Solyc10g049570.3 Solanum lycopersicum HOM05D007173 ORTHO05D009151 1.1e-06 59.3 159 25.8
CDE06G1380 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 1.8e-06 58.5 104 34.6
Sopen10g021030 Solanum pennellii HOM05D007173 ORTHO05D009151 1.8e-06 58.5 159 25.8
PGSC0003DMG400008024 Solanum tuberosum HOM05D007145 ORTHO05D008952 1.8e-06 58.5 144 27.8
BcaB03g16413 Brassica carinata HOM05D005287 ORTHO05D006893 2.3e-06 58.2 133 28.6
CDE02G3157 Ceratophyllum demersum HOM05D007145 ORTHO05D008952 2.3e-06 58.2 159 23.3
PGSC0003DMG401009781 Solanum tuberosum HOM05D007173 ORTHO05D009151 2.3e-06 58.2 159 25.8
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 3.1e-06 57.8 175 30.3
Ca_23675_v3 Cicer arietinum L. HOM05D007145 ORTHO05D008952 3.1e-06 57.8 164 24.4
Hma1.2p1_1765F.1_g301480 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 4.0e-06 57.4 152 26.3
BcaC06g36288 Brassica carinata HOM05D006556 ORTHO05D008146 5.2e-06 57.0 145 27.6
Lsat_1_v5_gn_6_5460 Lactuca sativa HOM05D007145 ORTHO05D008952 5.2e-06 57.0 125 29.6
Atru.chr5.2775 Acer truncatum HOM05D006858 ORTHO05D008767 6.8e-06 56.6 138 27.5
Gohir.A03G191600 Gossypium hirsutum HOM05D006858 ORTHO05D008767 6.8e-06 56.6 139 25.9
Os02g0759500 Oryza sativa ssp. japonica HOM05D007145 ORTHO05D008952 6.8e-06 56.6 144 27.1
Peaxi162Scf00126g00029 Petunia axillaris HOM05D007145 ORTHO05D008952 6.8e-06 56.6 144 27.8
Sopen04g032760 Solanum pennellii HOM05D007145 ORTHO05D008952 6.8e-06 56.6 144 27.8
VMungo0720G0765 Vigna mungo HOM05D007752 ORTHO05D009994 6.8e-06 56.6 160 27.5
Solyc04g079150.1 Solanum lycopersicum HOM05D007145 ORTHO05D008952 8.9e-06 56.2 144 27.8


User provided reference genes

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