Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000319 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D010967 9.5e-26 119.4 60 100.0
CSS0010536 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D000464 1.6e-12 75.5 57 70.2
CSS0011903 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D010967 1.6e-12 75.5 57 70.2
CSS0030286 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D010967 3.5e-12 74.3 41 90.2
vmacro03021 Vaccinium macrocarpon HOM05D000115 ORTHO05D010967 3.3e-10 67.8 55 63.6
HanXRQChr01g0001891 Helianthus annuus HOM05D000115 ORTHO05D000464 1.2e-09 65.9 49 71.4
Rhsim13G0076400 Rhododendron simsii HOM05D000115 ORTHO05D000464 2.8e-09 64.7 55 61.8
Lj2A1070G73 Lonicera japonica HOM05D000115 ORTHO05D000464 3.6e-09 64.3 49 69.4
Solyc06g076430.3 Solanum lycopersicum HOM05D000115 ORTHO05D000464 3.6e-09 64.3 50 68.0
Sopen06g032840 Solanum pennellii HOM05D000115 ORTHO05D000464 3.6e-09 64.3 50 68.0
PGSC0003DMG400030424 Solanum tuberosum HOM05D000115 ORTHO05D000464 3.6e-09 64.3 50 68.0
Lsat_1_v5_gn_5_169781 Lactuca sativa HOM05D000115 ORTHO05D000464 6.2e-09 63.5 55 60.0
Lsat_1_v5_gn_9_24201 Lactuca sativa HOM05D000115 ORTHO05D000464 8.1e-09 63.2 49 69.4
CAN.G394.79 Capsicum annuum HOM05D000115 ORTHO05D000464 1.4e-08 62.4 49 67.3
Nitab4.5_0000839g0180 Nicotiana tabacum HOM05D000115 ORTHO05D282895 1.4e-08 62.4 55 61.8
DCAR_007420 Daucus carota HOM05D000115 ORTHO05D000464 1.8e-08 62.0 49 67.3
DCAR_007421 Daucus carota HOM05D000115 ORTHO05D010967 1.8e-08 62.0 49 67.3
DCAR_020522 Daucus carota HOM05D000115 ORTHO05D010967 1.8e-08 62.0 49 67.3
Nitab4.5_0004076g0030 Nicotiana tabacum HOM05D000115 ORTHO05D000464 2.3e-08 61.6 41 78.0
CSS0046695 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D000464 3.1e-08 61.2 55 60.0
HanXRQChr01g0010691 Helianthus annuus HOM05D000115 ORTHO05D000464 3.1e-08 61.2 55 54.5
Dinv17060 Davidia involucrata HOM05D000115 ORTHO05D000464 4.0e-08 60.8 55 56.4
Dinv43004 Davidia involucrata HOM05D000115 ORTHO05D000464 4.0e-08 60.8 55 56.4
Dinv43093 Davidia involucrata HOM05D000115 ORTHO05D000464 4.0e-08 60.8 55 56.4
HanXRQChr05g0135311 Helianthus annuus HOM05D000115 ORTHO05D000464 4.0e-08 60.8 41 75.6
Migut.D00870 Erythranthe guttata HOM05D000115 ORTHO05D000464 6.8e-08 60.1 49 65.3
SalBow6G4005 Salvia bowleyana HOM05D000115 ORTHO05D000464 8.9e-08 59.7 49 65.3
MSTRG.12653 Avicennia marina HOM05D000115 ORTHO05D000464 1.5e-07 58.9 49 63.3
SGA_v2.0_scaffold104G30159 Striga asiatica HOM05D000115 ORTHO05D000464 1.5e-07 58.9 49 63.3
Lj1A145G56 Lonicera japonica HOM05D000115 ORTHO05D000464 3.4e-07 57.8 50 66.0
Hma1.2p1_0543F.1_g175440 Hydrangea macrophylla HOM05D000115 ORTHO05D000464 4.4e-07 57.4 55 52.7
MSTRG.17828 Avicennia marina HOM05D000115 ORTHO05D000464 5.8e-07 57.0 49 61.2
Cc01_g13460 Coffea canephora HOM05D000115 ORTHO05D000464 5.8e-07 57.0 48 62.5
Oeu053895.1 Olea europaea HOM05D000115 ORTHO05D000464 5.8e-07 57.0 49 63.3
HanXRQChr06g0179081 Helianthus annuus HOM05D000115 ORTHO05D000464 7.6e-07 56.6 41 73.2
Oeu031743.1 Olea europaea HOM05D000115 ORTHO05D010967 1.3e-06 55.8 49 61.2
DCAR_005931 Daucus carota HOM05D000115 ORTHO05D000464 1.7e-06 55.5 46 63.0
SGA_v2.0_scaffold20G09304 Striga asiatica HOM05D000115 ORTHO05D000464 6.4e-06 53.5 49 59.2


User provided reference genes

Program Settings