Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.6e-310 1068.5 515 100.0
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 7.0e-303 1043.1 527 96.4
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 2.6e-249 865.1 524 81.9
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 2.8e-243 845.1 507 81.9
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 2.4e-242 842.0 545 76.7
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.3e-240 836.3 497 83.1
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 6.5e-240 833.9 524 79.6
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 3.8e-232 808.1 512 77.3
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 5.0e-232 807.7 466 82.4
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 4.8e-227 791.2 522 75.1
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 8.2e-227 790.4 460 81.3
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 3.1e-226 788.5 525 74.1
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 4.1e-226 788.1 523 74.4
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 5.3e-226 787.7 520 75.4
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 7.7e-225 783.9 520 74.6
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 1.0e-224 783.5 522 74.1
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 1.7e-224 782.7 521 74.7
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 5.0e-224 781.2 455 80.0
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 2.5e-223 778.9 519 74.8
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 4.2e-223 778.1 473 78.9
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.5e-223 777.7 522 74.5
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 7.2e-223 777.3 539 72.2
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 2.1e-222 775.8 521 73.7
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 2.7e-222 775.4 515 74.8
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 6.1e-222 774.2 520 74.0
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 8.0e-222 773.9 520 74.0
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 8.0e-222 773.9 522 73.8
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 2.3e-221 772.3 521 73.3
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 1.7e-219 766.1 516 73.1
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.8e-218 762.7 516 72.9
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 5.3e-218 761.1 510 72.9
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 5.3e-218 761.1 514 73.2
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 5.9e-217 757.7 509 72.5
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 7.7e-217 757.3 505 73.7
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 1.0e-216 756.9 455 80.0
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.0e-216 756.9 544 70.4
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 2.9e-216 755.4 524 71.2
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 1.1e-215 753.4 523 71.9
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 1.1e-215 753.4 508 72.2
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.1e-215 753.4 481 74.4
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 2.5e-215 752.3 509 72.7
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 5.5e-215 751.1 514 72.0
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 7.2e-215 750.7 521 71.2
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 9.4e-215 750.4 511 72.2
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 3.6e-214 748.4 508 71.3
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 6.1e-214 747.7 514 71.8
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 2.3e-213 745.7 527 69.6
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 3.0e-213 745.3 524 68.7
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 4.0e-213 745.0 520 71.7
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 4.0e-213 745.0 534 69.1
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 1.5e-212 743.0 481 74.8
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 2.2e-211 739.2 520 69.6
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 1.8e-210 736.1 516 70.7
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 3.1e-210 735.3 482 74.7
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 4.1e-210 734.9 503 70.2
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 5.3e-210 734.6 515 70.1
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 9.1e-210 733.8 457 77.9
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 9.1e-210 733.8 485 71.8
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 1.6e-209 733.0 488 71.7
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 2.7e-209 732.3 484 72.1
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.5e-209 731.9 459 76.5
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 1.7e-208 729.6 515 69.3
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 3.8e-208 728.4 450 75.8
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 6.5e-208 727.6 522 68.0
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 8.5e-208 727.2 499 70.5
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 1.5e-207 726.5 514 68.9
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 1.9e-207 726.1 461 73.8
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.9e-207 726.1 499 69.1
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 3.2e-207 725.3 499 70.3
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 3.2e-207 725.3 459 74.7
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 9.4e-207 723.8 500 70.4
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 9.4e-207 723.8 499 69.9
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 1.2e-206 723.4 481 71.7
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 1.2e-206 723.4 519 68.6
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 1.6e-206 723.0 484 72.7
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 2.1e-206 722.6 514 68.7
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 2.1e-206 722.6 514 68.3
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 2.7e-206 722.2 523 68.3
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 4.7e-206 721.5 481 71.3
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 5.2e-205 718.0 511 70.1
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 6.8e-205 717.6 492 71.5
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 8.8e-205 717.2 522 68.2
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 1.5e-204 716.5 513 69.8
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 2.8e-203 712.2 465 72.9
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 7.0e-202 707.6 485 69.3
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 2.7e-201 705.7 446 74.2
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 2.3e-200 702.6 478 69.5
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 5.5e-199 698.0 454 71.6
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 8.9e-197 690.6 455 72.7
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 8.9e-197 690.6 499 68.3
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 5.4e-186 654.8 461 69.2
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 5.0e-184 648.3 466 67.6
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 4.3e-183 645.2 496 63.9
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 2.0e-180 636.3 464 68.3
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 4.9e-179 631.7 503 63.4
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 9.5e-175 617.5 471 63.7
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 2.8e-174 615.9 452 63.3
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 8.3e-171 604.4 364 77.7
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 2.4e-170 602.8 406 73.6
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 4.1e-170 602.1 454 61.9
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 3.0e-168 595.9 451 63.0
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 9.5e-167 590.9 417 70.3
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 3.4e-164 582.4 526 58.7
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 3.4e-140 502.7 331 74.0
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 6.4e-139 498.4 480 56.5
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 1.1e-122 444.5 479 48.0
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.4e-120 437.6 324 68.8
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 2.6e-108 396.7 481 45.7
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 1.6e-100 370.9 270 66.3
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 2.3e-96 357.1 481 43.7
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 7.8e-76 288.9 447 39.1
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 2.8e-41 174.1 100 79.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 1.2e-39 168.7 229 40.6
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 2.3e-35 154.5 98 75.5
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 2.3e-35 154.5 98 75.5
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 2.3e-35 154.5 98 75.5
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 2.3e-35 154.5 98 75.5
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 6.0e-28 129.8 283 32.9
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 4.0e-24 117.1 87 60.9
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 4.8e-17 93.6 66 65.2
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 5.1e-11 73.6 43 81.4
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 3.1e-08 64.3 40 67.5
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 6.9e-08 63.2 41 78.0
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 1.5e-07 62.0 115 40.0


User provided reference genes

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