Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.4e-204 716.1 357 100.0
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.4e-172 609.8 357 86.8
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 5.1e-167 591.3 357 85.2
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 7.3e-166 587.4 356 83.1
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 2.9e-162 575.5 361 82.3
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 2.1e-160 569.3 357 80.7
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 2.1e-160 569.3 357 81.5
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 5.6e-158 561.2 363 78.0
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 1.1e-156 557.0 394 73.4
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 1.5e-155 553.1 360 78.1
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 9.9e-155 550.4 357 78.4
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 2.2e-154 549.3 360 77.8
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 4.9e-154 548.1 359 77.7
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 6.4e-154 547.7 360 78.9
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 5.4e-153 544.7 360 76.4
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 7.1e-153 544.3 360 77.8
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 2.7e-152 542.3 371 76.3
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 1.3e-151 540.0 360 76.7
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 3.9e-151 538.5 325 81.2
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 1.9e-150 536.2 356 75.0
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 4.3e-150 535.0 325 81.5
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 4.3e-150 535.0 325 81.2
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 5.6e-150 534.6 321 81.6
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 1.3e-149 533.5 360 75.8
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 1.1e-148 530.4 364 73.1
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 1.8e-148 529.6 357 75.6
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 1.8e-148 529.6 352 77.6
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 3.4e-147 525.4 367 73.8
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 4.5e-147 525.0 359 74.1
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 7.6e-147 524.2 381 72.2
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 7.6e-147 524.2 357 75.1
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 1.3e-146 523.5 356 75.0
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 1.7e-146 523.1 359 74.7
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 2.9e-146 522.3 367 73.6
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 4.9e-146 521.5 370 72.2
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 4.9e-146 521.5 361 74.0
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 1.1e-145 520.4 328 79.3
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 1.4e-145 520.0 356 73.6
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 3.2e-145 518.8 353 74.2
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 7.1e-145 517.7 364 71.7
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 7.1e-145 517.7 367 73.0
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 2.1e-144 516.2 354 72.3
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 2.7e-144 515.8 395 68.4
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 2.7e-144 515.8 355 73.8
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 4.6e-144 515.0 363 73.0
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 6.0e-144 514.6 364 70.9
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 7.9e-144 514.2 369 72.1
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 1.8e-143 513.1 361 73.1
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 3.9e-143 511.9 361 70.6
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 6.7e-143 511.1 361 72.9
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.9e-142 509.6 361 72.6
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 4.3e-142 508.4 315 81.0
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 2.1e-141 506.1 355 74.9
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.7e-141 505.4 377 70.6
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 3.7e-141 505.4 380 70.8
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 1.8e-140 503.1 318 74.5
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 5.3e-140 501.5 427 63.9
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 6.9e-140 501.1 356 72.8
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 6.9e-140 501.1 388 69.1
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 9.0e-140 500.7 319 76.8
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 1.2e-139 500.4 350 72.9
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 1.5e-139 500.0 357 71.4
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 1.5e-139 500.0 371 70.1
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 2.0e-139 499.6 357 71.1
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 2.0e-139 499.6 292 83.2
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 2.0e-139 499.6 362 69.9
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 2.6e-139 499.2 350 72.3
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 3.4e-139 498.8 356 71.1
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 4.5e-139 498.4 357 70.6
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 4.5e-139 498.4 357 71.1
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 2.2e-138 496.1 364 70.3
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 3.8e-138 495.4 357 70.3
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 6.5e-138 494.6 352 74.1
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 1.1e-137 493.8 357 71.7
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.9e-137 493.0 349 74.5
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 1.9e-137 493.0 355 69.9
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 3.2e-137 492.3 312 78.8
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 7.1e-137 491.1 357 69.7
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 7.1e-137 491.1 357 69.5
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 9.3e-137 490.7 370 67.8
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 1.2e-136 490.3 290 83.1
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 3.9e-135 485.3 322 74.5
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 5.1e-135 485.0 366 67.2
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 6.7e-135 484.6 353 67.7
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 6.7e-135 484.6 358 70.4
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 8.7e-135 484.2 347 70.9
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 8.7e-135 484.2 360 69.7
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 4.3e-134 481.9 322 74.2
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 1.6e-133 479.9 322 73.9
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 1.6e-133 479.9 322 73.9
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 6.3e-133 478.0 282 83.7
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 4.5e-131 471.9 364 68.4
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 5.9e-131 471.5 368 65.5
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 1.3e-130 470.3 326 70.6
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 1.7e-130 469.9 351 67.5
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 2.5e-129 466.1 355 66.5
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 4.2e-129 465.3 308 74.4
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 1.2e-128 463.8 317 73.2
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 6.7e-127 458.0 297 77.8
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 1.1e-126 457.2 323 70.9
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 3.1e-124 449.1 253 87.0
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 3.1e-124 449.1 296 75.7
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 8.5e-122 441.0 256 86.7
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 2.3e-119 433.0 257 81.3
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 7.2e-105 384.8 306 63.1
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 9.4e-105 384.4 259 73.0
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 3.6e-104 382.5 320 59.1
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 6.3e-101 371.7 341 56.3
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 8.2e-101 371.3 363 56.5
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 9.1e-100 367.9 350 57.7
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 2.2e-98 363.2 241 73.4
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 3.8e-98 362.5 358 56.7
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 4.7e-96 355.5 295 63.4
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.0e-95 354.4 307 62.5
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 4.0e-95 352.4 364 54.7
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 2.7e-91 339.7 195 84.6
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 2.4e-84 316.6 284 57.7
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 2.0e-83 313.5 338 50.3
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 2.0e-83 313.5 367 50.1
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.0e-83 313.5 268 64.6
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 7.3e-81 305.1 198 79.3
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 8.3e-77 291.6 176 80.1
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 8.0e-72 275.0 192 71.9
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 4.9e-69 265.8 191 71.2
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 4.1e-68 262.7 367 39.0
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 8.6e-66 255.0 198 69.7
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 8.1e-64 248.4 181 70.2
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 1.8e-63 247.3 169 76.3
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 1.3e-61 241.1 164 72.6
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 4.9e-61 239.2 341 40.5
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 9.2e-60 235.0 204 61.8
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 4.0e-55 219.5 358 38.3
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 6.0e-51 205.7 165 64.8
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 1.3e-50 204.5 284 39.1
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 1.3e-50 204.5 121 80.2
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.9e-50 203.0 124 75.0
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 9.6e-49 198.4 125 72.0
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 2.4e-47 193.7 256 42.6
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 3.0e-42 176.8 367 34.3
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.3e-40 171.4 324 39.2
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 2.4e-36 157.1 159 55.3
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 2.4e-36 157.1 129 63.6
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 4.2e-36 156.4 123 63.4
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 4.5e-30 136.3 96 72.9
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 3.0e-26 123.6 88 72.7
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 1.5e-25 121.3 69 82.6
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 8.4e-21 105.5 90 60.0
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 2.3e-18 97.4 73 67.1
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 9.3e-12 75.5 42 83.3


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