Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 1.6e-147 526.6 361 100.0
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 3.7e-117 425.6 361 68.7
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 4.1e-116 422.2 363 74.1
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 3.6e-112 409.1 361 75.6
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 1.2e-110 404.1 361 70.4
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 3.4e-110 402.5 363 70.8
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 4.6e-107 392.1 362 64.1
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 7.3e-105 384.8 387 61.2
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 1.2e-104 384.0 362 74.3
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 2.1e-104 383.3 363 64.2
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 2.1e-104 383.3 365 66.3
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 2.1e-104 383.3 361 80.6
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 8.1e-104 381.3 362 70.7
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 8.1e-104 381.3 362 79.6
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.4e-103 380.6 362 74.0
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 2.6e-102 376.3 361 60.1
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 1.7e-101 373.6 366 69.4
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 3.7e-101 372.5 363 64.5
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 1.9e-100 370.2 362 68.5
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 9.2e-100 367.9 366 67.8
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 1.6e-99 367.1 361 63.7
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 2.1e-99 366.7 364 64.0
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 2.7e-99 366.3 366 62.0
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 4.6e-99 365.5 367 65.1
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 5.1e-98 362.1 359 66.6
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 6.6e-98 361.7 362 61.9
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 8.6e-98 361.3 361 59.3
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 8.6e-98 361.3 366 67.2
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 1.1e-97 360.9 362 57.7
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 7.3e-97 358.2 362 60.2
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 2.1e-96 356.7 414 58.9
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 2.8e-96 356.3 361 59.0
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 3.6e-96 355.9 367 64.3
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 6.2e-96 355.1 365 55.9
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 6.2e-96 355.1 366 60.7
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 1.4e-95 354.0 365 62.2
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 1.8e-95 353.6 362 69.6
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 4.0e-95 352.4 366 58.5
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 6.8e-95 351.7 363 55.6
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 6.8e-95 351.7 366 65.3
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 6.8e-95 351.7 362 68.0
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 8.9e-95 351.3 362 56.4
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 4.4e-94 349.0 366 62.0
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 5.8e-94 348.6 364 54.7
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 1.3e-93 347.4 363 60.6
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 2.2e-93 346.7 365 63.8
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.2e-93 346.7 369 59.9
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 2.9e-93 346.3 362 61.3
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 3.8e-93 345.9 363 60.3
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 4.9e-93 345.5 344 61.9
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 4.9e-93 345.5 366 57.7
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 6.4e-93 345.1 367 58.9
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 1.4e-92 344.0 368 67.1
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 1.9e-92 343.6 361 60.9
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 5.4e-92 342.0 367 55.9
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 5.4e-92 342.0 367 56.7
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 5.4e-92 342.0 367 56.7
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 5.4e-92 342.0 195 84.6
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 1.6e-91 340.5 362 60.5
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.7e-91 339.7 369 58.0
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 3.5e-91 339.3 193 85.5
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 7.8e-91 338.2 367 57.5
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 7.8e-91 338.2 367 57.5
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.0e-90 337.8 369 58.0
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 1.7e-90 337.0 362 61.9
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 1.7e-90 337.0 193 85.0
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 3.9e-90 335.9 369 63.1
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 6.6e-90 335.1 382 58.4
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 6.6e-90 335.1 369 57.5
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 6.6e-90 335.1 369 57.5
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 1.5e-89 334.0 363 54.0
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 4.3e-89 332.4 369 60.7
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 5.6e-89 332.0 195 83.1
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 8.1e-88 328.2 363 56.2
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 1.4e-87 327.4 373 67.3
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 1.4e-87 327.4 196 82.1
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 4.0e-87 325.9 363 63.6
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 3.4e-86 322.8 195 80.5
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 4.4e-86 322.4 195 82.6
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 9.9e-86 321.2 193 82.4
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 2.2e-85 320.1 195 77.9
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.1e-84 317.8 195 77.4
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 5.4e-84 315.5 361 54.6
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 1.2e-83 314.3 442 52.3
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 4.6e-83 312.4 363 55.6
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 3.0e-82 309.7 368 56.2
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 1.9e-81 307.0 362 55.0
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 4.3e-81 305.8 195 77.4
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 4.8e-80 302.4 194 75.8
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 4.8e-80 302.4 366 53.8
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 2.4e-79 300.1 365 51.8
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 9.0e-79 298.1 398 62.3
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 5.4e-76 288.9 196 74.0
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 4.8e-72 275.8 364 47.0
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 2.0e-70 270.4 196 67.3
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 2.9e-69 266.5 339 55.5
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 7.9e-67 258.5 294 78.6
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 1.1e-65 254.6 292 64.7
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 1.1e-65 254.6 292 64.4
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 3.3e-65 253.1 164 77.4
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 2.2e-61 240.4 293 53.2
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 2.9e-61 240.0 197 61.9
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 3.2e-60 236.5 190 62.6
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 7.9e-59 231.9 141 79.4
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 9.6e-57 224.9 292 57.5
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 4.1e-55 219.5 195 56.4
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 4.2e-52 209.5 173 57.8
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 2.3e-50 203.8 184 55.4
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 1.6e-48 197.6 182 54.4
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 3.2e-44 183.3 193 46.6
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 1.5e-25 121.3 82 68.3
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 2.5e-20 104.0 138 41.3
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 4.2e-20 103.2 72 69.4
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 7.2e-20 102.4 137 42.3
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 5.7e-17 92.8 193 34.2
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 4.8e-16 89.7 191 31.4
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 3.1e-15 87.0 58 77.6
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 1.7e-13 81.3 48 87.5
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 4.4e-09 66.6 44 63.6
Solyc05g013480.4 Solanum lycopersicum HOM05D006540 ORTHO05D008202 9.8e-09 65.5 101 48.5
Pp3c6_29630 Physcomitrium patens HOM05D006540 ORTHO05D008202 3.5e-06 57.0 72 38.9


User provided reference genes

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