Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000263 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D022125 4.5e-52 207.6 103 100.0
CSS0005982 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D022125 4.5e-52 207.6 103 100.0
CSS0003955 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D022125 3.8e-51 204.5 103 98.1
CSS0034235 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D022125 6.6e-51 203.8 103 99.0
CSS0016400 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D022125 1.1e-50 203.0 103 98.1
CSS0030375 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004473 1.0e-35 153.3 114 73.7
Glyma.20G190000 Glycine max HOM05D000207 ORTHO05D004473 2.3e-35 152.1 114 70.2
Aa31LG11G5380 Aethionema arabicum HOM05D000207 ORTHO05D004473 3.0e-35 151.8 114 71.1
Aa31LG3G3390 Aethionema arabicum HOM05D000207 ORTHO05D004473 3.0e-35 151.8 114 71.1
AL3G21960 Arabidopsis lyrata HOM05D000207 ORTHO05D004473 3.0e-35 151.8 114 71.1
AT5G04510 Arabidopsis thaliana HOM05D000207 ORTHO05D004473 3.0e-35 151.8 114 71.1
Thhalv10020612m.g Eutrema salsugineum HOM05D000207 ORTHO05D004473 3.0e-35 151.8 114 71.1
CARHR085060 Cardamine hirsuta HOM05D000207 ORTHO05D004473 3.9e-35 151.4 114 71.1
FAN06G1510 Fragaria x ananassa HOM05D000055 ORTHO05D004473 3.9e-35 151.4 115 71.3
Lalb_Chr06g0170081 Lupinus albus HOM05D000207 ORTHO05D004473 3.9e-35 151.4 114 71.1
Atru.chr12.932 Acer truncatum HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
AT3G10540 Arabidopsis thaliana HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
A01p41690 Brassica napus HOM05D005033 ORTHO05D004473 5.1e-35 151.0 114 71.1
A05p38630 Brassica napus HOM05D005033 ORTHO05D004473 5.1e-35 151.0 114 71.1
C05p57510 Brassica napus HOM05D005033 ORTHO05D004473 5.1e-35 151.0 114 71.1
BolC5t34408H Brassica oleracea HOM05D005033 ORTHO05D004473 5.1e-35 151.0 114 71.1
BraA01t04243Z Brassica rapa HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
BraA05t22653Z Brassica rapa HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
Duzib114G0299 Durio zibethinus HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
Duzib128G1411 Durio zibethinus HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
FvH4_7g18280 Fragaria vesca HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
FAN06G3011 Fragaria x ananassa HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
Lj5g0004677 Lotus japonicus HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 69.3
Phvul.007G144600 Phaseolus vulgaris HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 69.3
RcHm_v2.0_Chr1g0361861 Rosa chinensis HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
Sabra10G0180600 Salix brachista HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 72.8
Sp3g08820 Schrenkiella parvula HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
TWI38G1628 Tripterygium wilfordii HOM05D000207 ORTHO05D004473 5.1e-35 151.0 114 71.1
BcaB04g21234 Brassica carinata HOM05D000207 ORTHO05D004473 6.6e-35 150.6 114 70.2
Cfa011202 Carpinus fangiana HOM05D000207 ORTHO05D004473 6.6e-35 150.6 114 71.1
Glyma.10G200600 Glycine max HOM05D000207 ORTHO05D004473 6.6e-35 150.6 114 69.3
Gohir.A01G129100 Gossypium hirsutum HOM05D000207 ORTHO05D004473 6.6e-35 150.6 114 71.1
Gohir.D01G118700 Gossypium hirsutum HOM05D000207 ORTHO05D004473 6.6e-35 150.6 114 71.1
Medtr1g090917 Medicago truncatula HOM05D000207 ORTHO05D004473 6.6e-35 150.6 114 69.3
Psat6g174800 Pisum sativum HOM05D000207 ORTHO05D004473 6.6e-35 150.6 114 69.3
Carub.0003s0978 Capsella rubella HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
Carub.0006s0345 Capsella rubella HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
CAN.G135.49 Capsicum annuum HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
CARHR208760 Cardamine hirsuta HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
Ca_10467_v3 Cicer arietinum L. HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 69.3
Thhalv10013385m.g Eutrema salsugineum HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
Nitab4.5_0000593g0180 Nicotiana tabacum HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
Peaxi162Scf00253g00141 Petunia axillaris HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
Sp6g38240 Schrenkiella parvula HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
Solyc11g007760.2 Solanum lycopersicum HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
Sopen11g003620 Solanum pennellii HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
THA.LOC104816450 Tarenaya hassleriana HOM05D000207 ORTHO05D004473 8.6e-35 150.2 114 70.2
BolC1t05385H Brassica oleracea HOM05D000207 ORTHO05D004473 1.1e-34 149.8 114 71.1
Oeu047513.2 Olea europaea HOM05D000207 ORTHO05D004473 1.1e-34 149.8 114 70.2
Potri.010G232800 Populus trichocarpa HOM05D000207 ORTHO05D004473 1.1e-34 149.8 114 71.9
Thecc.10G093700 Theobroma cacao HOM05D000207 ORTHO05D004473 1.1e-34 149.8 114 70.2
VMungo0720G2759 Vigna mungo HOM05D000207 ORTHO05D004473 1.1e-34 149.8 114 68.4
A10p31580 Brassica napus HOM05D000207 ORTHO05D004473 1.5e-34 149.4 114 69.3
C09p72250 Brassica napus HOM05D000207 ORTHO05D004473 1.5e-34 149.4 114 69.3
BolC9t59969H Brassica oleracea HOM05D000207 ORTHO05D004473 1.5e-34 149.4 114 69.3
BraA10t45204Z Brassica rapa HOM05D000207 ORTHO05D004473 1.5e-34 149.4 114 69.3
CSS0024824 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004473 1.5e-34 149.4 114 70.2
CSS0035486 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004473 1.5e-34 149.4 114 70.2
CAN.G316.5 Capsicum annuum HOM05D000207 ORTHO05D004473 1.5e-34 149.4 114 71.1
Cc02_g10410 Coffea canephora HOM05D000207 ORTHO05D004473 1.5e-34 149.4 114 70.2
QL04p040407 Quercus lobata HOM05D000207 ORTHO05D004473 1.5e-34 149.4 114 69.3
vmacro07211 Vaccinium macrocarpon HOM05D000207 ORTHO05D004473 1.5e-34 149.4 114 70.2
Ciclev10031678m.g Citrus clementina HOM05D000207 ORTHO05D004473 1.9e-34 149.1 114 70.2
Gorai.002G144800 Gossypium raimondii HOM05D000207 ORTHO05D004473 1.9e-34 149.1 114 70.2
Psat0s2832g0040 Pisum sativum HOM05D000207 ORTHO05D004473 1.9e-34 149.1 114 68.4
PGSC0003DMG402027355 Solanum tuberosum HOM05D000207 ORTHO05D004473 1.9e-34 149.1 114 70.2
TAR633G0321 Trochodendron aralioides HOM05D001933 ORTHO05D004473 1.9e-34 149.1 114 71.1
BcaC05g29451 Brassica carinata HOM05D000207 ORTHO05D004473 2.5e-34 148.7 114 70.2
BcaC05g29453 Brassica carinata HOM05D005033 ORTHO05D004473 2.5e-34 148.7 114 70.2
CANSAT56G2199 Cannabis sativa HOM05D000207 ORTHO05D004473 2.5e-34 148.7 114 71.1
Eucgr.J01029 Eucalyptus grandis HOM05D000207 ORTHO05D004473 2.5e-34 148.7 114 70.2
MD01G1098600 Malus domestica HOM05D000207 ORTHO05D004473 2.5e-34 148.7 114 70.2
Nitab4.5_0001016g0070 Nicotiana tabacum HOM05D000207 ORTHO05D004473 2.5e-34 148.7 114 68.4
Nitab4.5_0003408g0150 Nicotiana tabacum HOM05D000207 ORTHO05D004473 2.5e-34 148.7 114 69.3
Prupe.2G204000 Prunus persica HOM05D000207 ORTHO05D004473 2.5e-34 148.7 114 70.2
Sc20g0001400 Simmondsia chinensis HOM05D000207 ORTHO05D004473 2.5e-34 148.7 114 70.2
CiPaw.14G027400 Carya illinoinensis HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 70.2
FAN01G1531 Fragaria x ananassa HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 70.2
FAN01G2015 Fragaria x ananassa HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 70.2
FAN10G1984 Fragaria x ananassa HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 70.2
Lalb_Chr19g0129301 Lupinus albus HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 69.3
Manes.10G054000 Manihot esculenta HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 68.4
Nn2g13951 Nelumbo nucifera HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 70.2
Solyc03g071750.3 Solanum lycopersicum HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 70.2
Sopen03g020030 Solanum pennellii HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 70.2
PGSC0003DMG400016913 Solanum tuberosum HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 70.2
TPR.G21921 Trifolium pratense HOM05D000207 ORTHO05D004473 3.3e-34 148.3 114 67.5
AL6G14150 Arabidopsis lyrata HOM05D000207 ORTHO05D004473 4.3e-34 147.9 114 69.3
EL10As9g23947 Beta vulgaris HOM05D000207 ORTHO05D004473 4.3e-34 147.9 114 69.3
AUR62043367 Chenopodium quinoa HOM05D000207 ORTHO05D004473 4.3e-34 147.9 114 69.3
Hma1.2p1_0361F.1_g135950 Hydrangea macrophylla HOM05D000207 ORTHO05D004473 4.3e-34 147.9 114 69.3
Potri.008G028800 Populus trichocarpa HOM05D000207 ORTHO05D004473 4.3e-34 147.9 114 69.3
Rhsim03G0110400 Rhododendron simsii HOM05D000207 ORTHO05D004473 4.3e-34 147.9 114 69.3
Sed0021073 Sechium edule HOM05D000207 ORTHO05D004473 4.3e-34 147.9 114 69.3
SGA_v2.0_scaffold13G06467 Striga asiatica HOM05D000207 ORTHO05D004473 4.3e-34 147.9 114 69.3
Actinidia06711 Actinidia chinensis HOM05D000207 ORTHO05D004473 5.6e-34 147.5 114 69.3
Actinidia18562 Actinidia chinensis HOM05D000207 ORTHO05D004473 5.6e-34 147.5 114 69.3
ClCG05G021500 Citrullus lanatus HOM05D000207 ORTHO05D004473 5.6e-34 147.5 114 69.3
Haze_02644 Corylus avellana HOM05D000207 ORTHO05D004473 5.6e-34 147.5 124 66.1
Migut.F00925 Erythranthe guttata HOM05D000207 ORTHO05D004473 5.6e-34 147.5 114 69.3
MD07G1165300 Malus domestica HOM05D000207 ORTHO05D004473 5.6e-34 147.5 114 70.2
Peaxi162Scf00398g00725 Petunia axillaris HOM05D000207 ORTHO05D004473 5.6e-34 147.5 119 66.4
Psat0s1617g0040 Pisum sativum HOM05D000207 ORTHO05D004473 5.6e-34 147.5 114 67.5
GSVIVG01034673001 Vitis vinifera HOM05D000207 ORTHO05D004473 5.6e-34 147.5 114 69.3
MELO3C012376.2 Cucumis melo HOM05D000207 ORTHO05D004473 7.3e-34 147.1 114 69.3
CsaV3_5G035750 Cucumis sativus L. HOM05D000207 ORTHO05D004473 7.3e-34 147.1 114 69.3
ECA233G1732 Erigeron canadensis HOM05D000038 ORTHO05D004473 7.3e-34 147.1 114 68.4
Hma1.2p1_1625F.1_g294310 Hydrangea macrophylla HOM05D000207 ORTHO05D004473 7.3e-34 147.1 114 67.5
Lsat_1_v5_gn_8_22900 Lactuca sativa HOM05D000207 ORTHO05D004473 7.3e-34 147.1 114 68.4
Manes.07G093000 Manihot esculenta HOM05D000207 ORTHO05D004473 7.3e-34 147.1 114 68.4
Nitab4.5_0001313g0010 Nicotiana tabacum HOM05D000207 ORTHO05D004473 7.3e-34 147.1 114 67.5
Ah.04g163540 Amaranthus hybridus HOM05D000207 ORTHO05D004473 1.2e-33 146.4 114 68.4
arahy.Tifrunner.gnm1.ann1.I5SWNV Arachis hypogaea HOM05D000207 ORTHO05D004473 1.2e-33 146.4 114 68.4
arahy.Tifrunner.gnm1.ann1.MV6I8X Arachis hypogaea HOM05D000207 ORTHO05D004473 1.2e-33 146.4 114 68.4
Gohir.D05G291500 Gossypium hirsutum HOM05D000207 ORTHO05D004473 1.2e-33 146.4 114 67.5
Gorai.009G307200 Gossypium raimondii HOM05D000207 ORTHO05D004473 1.2e-33 146.4 114 67.5
PGR044G1457 Punica granatum HOM05D000207 ORTHO05D004473 1.2e-33 146.4 114 68.4
AUR62043740 Chenopodium quinoa HOM05D000207 ORTHO05D004473 1.6e-33 146.0 114 68.4
Migut.F01666 Erythranthe guttata HOM05D000207 ORTHO05D004473 1.6e-33 146.0 114 68.4
SalBow4G0022 Salvia bowleyana HOM05D000207 ORTHO05D004473 1.6e-33 146.0 114 68.4
Dinv31278 Davidia involucrata HOM05D001491 ORTHO05D004473 2.8e-33 145.2 115 70.4
CSS0035322 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004473 3.6e-33 144.8 115 70.4
CiPaw.13G034800 Carya illinoinensis HOM05D000207 ORTHO05D004473 3.6e-33 144.8 114 68.4
Gohir.A05G290300 Gossypium hirsutum HOM05D000207 ORTHO05D004473 4.7e-33 144.4 114 66.7
Gohir.A05G394300 Gossypium hirsutum HOM05D000207 ORTHO05D004473 6.2e-33 144.1 114 67.5
Sed0002916 Sechium edule HOM05D000207 ORTHO05D004473 6.2e-33 144.1 115 69.6
unitig_736.g22534 Utricularia gibba HOM05D000207 ORTHO05D004473 6.2e-33 144.1 114 67.5
HanXRQChr12g0368411 Helianthus annuus HOM05D000207 ORTHO05D004473 1.1e-32 143.3 114 66.7
MSTRG.9118 Avicennia marina HOM05D000207 ORTHO05D004473 1.8e-32 142.5 114 65.8
DCAR_014270 Daucus carota HOM05D000207 ORTHO05D004473 1.8e-32 142.5 119 64.7
COL.COLO4_07609 Corchorus olitorius HOM05D001491 ORTHO05D004473 2.3e-32 142.1 130 60.8
Nn6g35103 Nelumbo nucifera HOM05D000207 ORTHO05D004473 3.1e-32 141.7 114 67.5
MSTRG.27513 Avicennia marina HOM05D000207 ORTHO05D004473 4.0e-32 141.4 114 67.5
BcaC06g32162 Brassica carinata HOM05D000207 ORTHO05D004473 5.2e-32 141.0 138 58.0
TAR623G1710 Trochodendron aralioides HOM05D000207 ORTHO05D004473 5.2e-32 141.0 114 68.4
Aqoxy2G01506 Aquilegia oxysepala HOM05D000207 ORTHO05D004473 1.2e-31 139.8 114 65.8
FAN10G1843 Fragaria x ananassa HOM05D000207 ORTHO05D004473 1.2e-31 139.8 136 58.8
Cpa.g.sc128.64 Carica papaya HOM05D000207 ORTHO05D004473 1.5e-31 139.4 114 67.5
PSO063G1339 Papaver somniferum HOM05D000207 ORTHO05D004473 4.4e-31 137.9 114 63.2
PSO339G3642 Papaver somniferum HOM05D000207 ORTHO05D004473 1.3e-30 136.3 114 62.3
HanXRQChr08g0218051 Helianthus annuus HOM05D000207 ORTHO05D004473 2.2e-30 135.6 115 65.2
PSO339G2723 Papaver somniferum HOM05D000207 ORTHO05D004473 2.9e-30 135.2 114 62.3
PSO384G5087 Papaver somniferum HOM05D000207 ORTHO05D004473 2.9e-30 135.2 114 62.3
CDE08G1512 Ceratophyllum demersum HOM05D000207 ORTHO05D004473 1.1e-29 133.3 114 64.9
FAN03G1778 Fragaria x ananassa HOM05D000207 ORTHO05D004473 1.1e-29 133.3 136 57.4
Lj3A934G30 Lonicera japonica HOM05D000207 ORTHO05D004473 1.4e-29 132.9 148 52.7
Lalb_Chr02g0151221 Lupinus albus HOM05D000207 ORTHO05D004473 5.4e-29 131.0 105 66.7
HPP92_025159 Vanilla planifolia HOM05D000207 ORTHO05D004473 5.4e-29 131.0 114 63.2
ATR0661G301 Amborella trichopoda HOM05D000207 ORTHO05D004473 7.1e-29 130.6 114 62.3
Zm00001eb146330 Zea mays HOM05D000207 ORTHO05D004473 3.9e-27 124.8 114 59.6
Os01g0872800 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004473 8.6e-27 123.6 114 58.8
Hund06744 Selenicereus undatus HOM05D000207 ORTHO05D004473 8.6e-27 123.6 169 45.6
unitig_899.g14484 Utricularia gibba HOM05D000207 ORTHO05D004473 1.5e-26 122.9 80 76.2
CSS0023838 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004473 7.3e-26 120.6 114 63.2
MBI17_g17191_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004473 7.3e-26 120.6 109 62.4
Gohir.A05G394175 Gossypium hirsutum HOM05D000207 ORTHO05D004473 2.8e-25 118.6 70 80.0
THA.LOC104816510 Tarenaya hassleriana HOM05D000207 ORTHO05D022125 5.8e-23 110.9 102 57.8
SEGI_25768 Sequoiadendron giganteum HOM05D000207 ORTHO05D004473 4.9e-22 107.8 114 50.0
Lj2C25T7 Lonicera japonica HOM05D000207 ORTHO05D004473 2.7e-20 102.1 114 54.4
DCAR_006380 Daucus carota HOM05D000207 ORTHO05D004473 1.0e-19 100.1 114 52.6
SMO367G0096 Selaginella moellendorffii HOM05D000207 ORTHO05D004473 5.1e-19 97.8 117 47.9
HPP92_009267 Vanilla planifolia HOM05D000207 ORTHO05D004473 9.6e-18 93.6 112 49.1
SGA_v2.0_scaffold13G06504 Striga asiatica HOM05D000207 ORTHO05D004473 2.8e-17 92.0 87 59.8
Mapoly0015s0182 Marchantia polymorpha HOM05D000207 ORTHO05D004473 9.0e-16 87.0 113 46.0
AagrBONN_evm.TU.Sc2ySwM_368.3398 Anthoceros agrestis HOM05D000207 ORTHO05D004473 1.6e-12 76.3 114 40.4
Pp3c26_8560 Physcomitrium patens HOM05D000207 ORTHO05D004473 6.6e-11 70.9 115 40.0
SHI21308 Sapria himalayana HOM05D000207 ORTHO05D004473 5.6e-10 67.8 45 68.9
CDE02G2680 Ceratophyllum demersum HOM05D000146 ORTHO05D004473 3.6e-09 65.1 41 75.6
Cre11.g467568 Chlamydomonas reinhardtii HOM05D000207 ORTHO05D004473 1.8e-08 62.8 116 34.5
BcaNung05806 Brassica carinata HOM05D000146 ORTHO05D004473 3.4e-07 58.5 27 96.3
Glyma.09G089700 Glycine max HOM05D000055 ORTHO05D000057 2.2e-06 55.8 109 33.9
Actinidia04404 Actinidia chinensis HOM05D000059 ORTHO05D004122 3.8e-06 55.1 106 33.0
Aqoxy4G00082 Aquilegia oxysepala HOM05D000055 ORTHO05D000057 3.8e-06 55.1 109 33.9
Medtr2g016340 Medicago truncatula HOM05D000055 ORTHO05D000057 4.9e-06 54.7 105 32.4
FAN01G0452 Fragaria x ananassa HOM05D000055 ORTHO05D000057 8.4e-06 53.9 108 33.3
Oeu027217.1 Olea europaea HOM05D000055 ORTHO05D000057 8.4e-06 53.9 108 35.2
PSO541G0974 Papaver somniferum HOM05D000055 ORTHO05D000057 8.4e-06 53.9 109 33.9
Phvul.009G213000 Phaseolus vulgaris HOM05D000055 ORTHO05D000057 8.4e-06 53.9 109 33.0
PGR119G2107 Punica granatum HOM05D000055 ORTHO05D000057 8.4e-06 53.9 107 34.6
VMungo1309G1378 Vigna mungo HOM05D000055 ORTHO05D000057 8.4e-06 53.9 109 33.0


User provided reference genes

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